RNA–Protein interactions for RNA: ENST00000628378.1

RFPL2-206, Transcript of ret finger protein like 2, humanhuman

TSL 1 (best)

Gene RFPL2, Length 1,171 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL2-206ENST00000628378 NISCHQ9Y2I1 1504 aa31.82■■■□□ 2.68
RFPL2-206ENST00000628378 ABCC9O60706 1549 aa28.47■■■□□ 2.15
RFPL2-206ENST00000628378 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
RFPL2-206ENST00000628378 RB1CC1Q8TDY2 1594 aa26.97■■□□□ 1.91
RFPL2-206ENST00000628378 DCAF8L2P0C7V8 631 aa26.95■■□□□ 1.9
RFPL2-206ENST00000628378 NACADO15069 1562 aa26.77■■□□□ 1.88
RFPL2-206ENST00000628378 DNAJC5BQ9UF47 199 aa26.66■■□□□ 1.86
RFPL2-206ENST00000628378 UNC13AQ9UPW8 1703 aa26.65■■□□□ 1.86
RFPL2-206ENST00000628378 PABPN1Q86U42 306 aaKnown RBP eCLIP26.58■■□□□ 1.85
RFPL2-206ENST00000628378 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.82
RFPL2-206ENST00000628378 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
RFPL2-206ENST00000628378 MYO15BQ96JP2 1530 aa26.34■■□□□ 1.81
RFPL2-206ENST00000628378 SCRIBQ14160 1630 aa26.13■■□□□ 1.77
RFPL2-206ENST00000628378 DCAF1Q9Y4B6 1507 aa26.12■■□□□ 1.77
RFPL2-206ENST00000628378 CC2D2AQ9P2K1 1620 aa25.67■■□□□ 1.7
RFPL2-206ENST00000628378 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
RFPL2-206ENST00000628378 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
RFPL2-206ENST00000628378 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
RFPL2-206ENST00000628378 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
RFPL2-206ENST00000628378 ATAD2BQ9ULI0 1458 aa24.77■■□□□ 1.56
RFPL2-206ENST00000628378 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
RFPL2-206ENST00000628378 MROH2BQ7Z745 1585 aa24.64■■□□□ 1.54
RFPL2-206ENST00000628378 BAZ1AQ9NRL2 1556 aaPredicted RBP24.62■■□□□ 1.53
RFPL2-206ENST00000628378 SMARCA2P51531 1590 aa24.61■■□□□ 1.53
RFPL2-206ENST00000628378 NESP48681 1621 aa24.57■■□□□ 1.52
RFPL2-206ENST00000628378 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
RFPL2-206ENST00000628378 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
RFPL2-206ENST00000628378 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
RFPL2-206ENST00000628378 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
RFPL2-206ENST00000628378 WIZO95785 1651 aa24.42■■□□□ 1.5
RFPL2-206ENST00000628378 KIF21AQ7Z4S6 1674 aa24.25■■□□□ 1.47
RFPL2-206ENST00000628378 CUX2O14529 1486 aa24.21■■□□□ 1.47
RFPL2-206ENST00000628378 THOC2Q8NI27 1593 aaKnown RBP24.17■■□□□ 1.46
RFPL2-206ENST00000628378 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
RFPL2-206ENST00000628378 DNAJC5Q9H3Z4 198 aa24.12■■□□□ 1.45
RFPL2-206ENST00000628378 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
RFPL2-206ENST00000628378 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
RFPL2-206ENST00000628378 PDS5BQ9NTI5 1447 aa23.97■■□□□ 1.43
RFPL2-206ENST00000628378 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
RFPL2-206ENST00000628378 MRC2Q9UBG0 1479 aa23.84■■□□□ 1.41
RFPL2-206ENST00000628378 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
RFPL2-206ENST00000628378 CFTRP13569 1480 aa23.78■■□□□ 1.4
RFPL2-206ENST00000628378 CEP164Q9UPV0 1460 aa23.78■■□□□ 1.4
RFPL2-206ENST00000628378 WDR62O43379 1518 aa23.78■■□□□ 1.4
RFPL2-206ENST00000628378 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
RFPL2-206ENST00000628378 URB2Q14146 1524 aaKnown RBP23.69■■□□□ 1.38
RFPL2-206ENST00000628378 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
RFPL2-206ENST00000628378 ZNF608Q9ULD9 1512 aaPredicted RBP23.41■■□□□ 1.34
RFPL2-206ENST00000628378 TOPBP1Q92547 1522 aa23.4■■□□□ 1.34
RFPL2-206ENST00000628378 SUPT5HO00267 1087 aaKnown RBP23.32■■□□□ 1.32
RFPL2-206ENST00000628378 TRIM41Q8WV44 630 aa23.31■■□□□ 1.32
RFPL2-206ENST00000628378 DNMBPQ6XZF7 1577 aa23.29■■□□□ 1.32
RFPL2-206ENST00000628378 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
RFPL2-206ENST00000628378 EIF4G3O43432 1585 aaKnown RBP23.23■■□□□ 1.31
RFPL2-206ENST00000628378 TARBP1Q13395 1621 aaKnown RBP23.22■■□□□ 1.31
RFPL2-206ENST00000628378 RAD54L2Q9Y4B4 1467 aa23.2■■□□□ 1.3
RFPL2-206ENST00000628378 AQRO60306 1485 aaKnown RBP eCLIP23.19■■□□□ 1.3
RFPL2-206ENST00000628378 OSCARQ8IYS5 282 aa23.19■■□□□ 1.3
RFPL2-206ENST00000628378 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
RFPL2-206ENST00000628378 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
RFPL2-206ENST00000628378 CUX1P39880 1505 aa23.13■■□□□ 1.29
RFPL2-206ENST00000628378 CHD1O14646 1710 aa23.12■■□□□ 1.29
RFPL2-206ENST00000628378 FGD5Q6ZNL6 1462 aa23.08■■□□□ 1.29
RFPL2-206ENST00000628378 TDRD9Q8NDG6 1382 aaKnown RBP23.07■■□□□ 1.28
RFPL2-206ENST00000628378 RIMBP3CA6NJZ7 1639 aa23.04■■□□□ 1.28
RFPL2-206ENST00000628378 RIMBP3BA6NNM3 1639 aa23.04■■□□□ 1.28
RFPL2-206ENST00000628378 RIMBP3Q9UFD9 1639 aa23.04■■□□□ 1.28
RFPL2-206ENST00000628378 SOGA1O94964 1423 aa23.04■■□□□ 1.28
RFPL2-206ENST00000628378 FBLN2P98095 1184 aa22.99■■□□□ 1.27
RFPL2-206ENST00000628378 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
RFPL2-206ENST00000628378 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
RFPL2-206ENST00000628378 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
RFPL2-206ENST00000628378 PBRM1Q86U86 1689 aa22.86■■□□□ 1.25
RFPL2-206ENST00000628378 SYNJ1O43426 1573 aa22.82■■□□□ 1.24
RFPL2-206ENST00000628378 CYB5RLQ6IPT4 315 aa22.78■■□□□ 1.24
RFPL2-206ENST00000628378 GRIN2BQ13224 1484 aa22.77■■□□□ 1.24
RFPL2-206ENST00000628378 ABCA5Q8WWZ7 1642 aa22.76■■□□□ 1.23
RFPL2-206ENST00000628378 GAPVD1Q14C86 1478 aa22.76■■□□□ 1.23
RFPL2-206ENST00000628378 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
RFPL2-206ENST00000628378 ARAP1Q96P48 1450 aa22.74■■□□□ 1.23
RFPL2-206ENST00000628378 CHMP7Q8WUX9 453 aaPredicted RBP22.74■■□□□ 1.23
RFPL2-206ENST00000628378 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
RFPL2-206ENST00000628378 CLASP1Q7Z460 1538 aa22.72■■□□□ 1.23
RFPL2-206ENST00000628378 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
RFPL2-206ENST00000628378 MAGI1Q96QZ7 1491 aaPredicted RBP22.71■■□□□ 1.23
RFPL2-206ENST00000628378 WRNQ14191 1432 aaPredicted RBP eCLIP22.69■■□□□ 1.22
RFPL2-206ENST00000628378 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
RFPL2-206ENST00000628378 ADAMTS12P58397 1594 aa22.58■■□□□ 1.2
RFPL2-206ENST00000628378 ERCC6L2Q5T890 1561 aa22.58■■□□□ 1.2
RFPL2-206ENST00000628378 CEP170Q5SW79 1584 aa22.54■■□□□ 1.2
RFPL2-206ENST00000628378 GRIN2AQ12879 1464 aa22.52■■□□□ 1.2
RFPL2-206ENST00000628378 TRHP20396 242 aaPredicted RBP22.45■■□□□ 1.18
RFPL2-206ENST00000628378 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
RFPL2-206ENST00000628378 ERICH3Q5RHP9 1530 aa22.41■■□□□ 1.18
RFPL2-206ENST00000628378 NUP160Q12769 1436 aa22.4■■□□□ 1.18
RFPL2-206ENST00000628378 SHROOM2Q13796 1616 aa22.34■■□□□ 1.17
RFPL2-206ENST00000628378 RUSC2Q8N2Y8 1516 aa22.26■■□□□ 1.15
RFPL2-206ENST00000628378 IGF1RP08069 1367 aa22.25■■□□□ 1.15
RFPL2-206ENST00000628378 PRG4Q92954 1404 aaPredicted RBP22.23■■□□□ 1.15
RFPL2-206ENST00000628378 JPH4Q96JJ6 628 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 295.9 ms