RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 NISCHQ9Y2I1 1504 aa19.33■□□□□ 0.68
CCDC163-204ENST00000628293 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
CCDC163-204ENST00000628293 AEBP2Q6ZN18 517 aaPredicted RBP16.92■□□□□ 0.3
CCDC163-204ENST00000628293 ABCC9O60706 1549 aa16.74■□□□□ 0.27
CCDC163-204ENST00000628293 ZCCHC6Q5VYS8 1495 aaKnown RBP16.14■□□□□ 0.17
CCDC163-204ENST00000628293 NACADO15069 1562 aa16.13■□□□□ 0.17
CCDC163-204ENST00000628293 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
CCDC163-204ENST00000628293 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
CCDC163-204ENST00000628293 DCAF1Q9Y4B6 1507 aa16.01■□□□□ 0.15
CCDC163-204ENST00000628293 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
CCDC163-204ENST00000628293 UNC13AQ9UPW8 1703 aa15.92■□□□□ 0.14
CCDC163-204ENST00000628293 BICRAQ9NZM4 1560 aa15.73■□□□□ 0.11
CCDC163-204ENST00000628293 SCRIBQ14160 1630 aa15.69■□□□□ 0.1
CCDC163-204ENST00000628293 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
CCDC163-204ENST00000628293 CHIC1Q5VXU3 224 aa15.54■□□□□ 0.08
CCDC163-204ENST00000628293 SHROOM4Q9ULL8 1493 aa15.49■□□□□ 0.07
CCDC163-204ENST00000628293 DNAJC5BQ9UF47 199 aa15.33■□□□□ 0.04
CCDC163-204ENST00000628293 EIF4G1Q04637 1599 aaKnown RBP15.26■□□□□ 0.03
CCDC163-204ENST00000628293 CC2D2AQ9P2K1 1620 aa15.2■□□□□ 0.02
CCDC163-204ENST00000628293 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
CCDC163-204ENST00000628293 SMARCA4P51532 1647 aa15.03■□□□□ -0
CCDC163-204ENST00000628293 BAZ1AQ9NRL2 1556 aaPredicted RBP14.97□□□□□ -0.01
CCDC163-204ENST00000628293 MROH2BQ7Z745 1585 aa14.91□□□□□ -0.02
CCDC163-204ENST00000628293 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
CCDC163-204ENST00000628293 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
CCDC163-204ENST00000628293 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
CCDC163-204ENST00000628293 NCAPD3P42695 1498 aa14.87□□□□□ -0.03
CCDC163-204ENST00000628293 HMGXB3Q12766 1538 aa14.84□□□□□ -0.03
CCDC163-204ENST00000628293 WIZO95785 1651 aa14.78□□□□□ -0.04
CCDC163-204ENST00000628293 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
CCDC163-204ENST00000628293 RSF1Q96T23 1441 aaPredicted RBP14.72□□□□□ -0.05
CCDC163-204ENST00000628293 TOP2AP11388 1531 aaKnown RBP14.6□□□□□ -0.07
CCDC163-204ENST00000628293 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
CCDC163-204ENST00000628293 NESP48681 1621 aa14.53□□□□□ -0.08
CCDC163-204ENST00000628293 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
CCDC163-204ENST00000628293 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
CCDC163-204ENST00000628293 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
CCDC163-204ENST00000628293 CADPSQ9ULU8 1353 aa14.4□□□□□ -0.1
CCDC163-204ENST00000628293 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
CCDC163-204ENST00000628293 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
CCDC163-204ENST00000628293 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
CCDC163-204ENST00000628293 CFTRP13569 1480 aa14.37□□□□□ -0.11
CCDC163-204ENST00000628293 PDS5BQ9NTI5 1447 aa14.32□□□□□ -0.12
CCDC163-204ENST00000628293 SENP3Q9H4L4 574 aaPredicted RBP14.27□□□□□ -0.13
CCDC163-204ENST00000628293 CUX2O14529 1486 aa14.26□□□□□ -0.13
CCDC163-204ENST00000628293 FANCD2Q9BXW9 1451 aa14.26□□□□□ -0.13
CCDC163-204ENST00000628293 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
CCDC163-204ENST00000628293 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
CCDC163-204ENST00000628293 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
CCDC163-204ENST00000628293 WDR62O43379 1518 aa14.22□□□□□ -0.13
CCDC163-204ENST00000628293 URB2Q14146 1524 aaKnown RBP14.16□□□□□ -0.14
CCDC163-204ENST00000628293 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
CCDC163-204ENST00000628293 DNMBPQ6XZF7 1577 aa14.07□□□□□ -0.16
CCDC163-204ENST00000628293 TOPBP1Q92547 1522 aa14.06□□□□□ -0.16
CCDC163-204ENST00000628293 ABCC8Q09428 1581 aa14□□□□□ -0.17
CCDC163-204ENST00000628293 CUX1P39880 1505 aa14□□□□□ -0.17
CCDC163-204ENST00000628293 TARBP1Q13395 1621 aaKnown RBP13.97□□□□□ -0.17
CCDC163-204ENST00000628293 POLA1P09884 1462 aaPredicted RBP13.94□□□□□ -0.18
CCDC163-204ENST00000628293 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
CCDC163-204ENST00000628293 BIVM-ERCC5R4GMW8 1640 aa13.93□□□□□ -0.18
CCDC163-204ENST00000628293 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
CCDC163-204ENST00000628293 WDR97A6NE52 1622 aa13.91□□□□□ -0.18
CCDC163-204ENST00000628293 SYNJ1O43426 1573 aa13.91□□□□□ -0.18
CCDC163-204ENST00000628293 ZNF608Q9ULD9 1512 aaPredicted RBP13.9□□□□□ -0.18
CCDC163-204ENST00000628293 EIF4G3O43432 1585 aaKnown RBP13.89□□□□□ -0.19
CCDC163-204ENST00000628293 TOP2BQ02880 1626 aa13.89□□□□□ -0.19
CCDC163-204ENST00000628293 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
CCDC163-204ENST00000628293 WRNQ14191 1432 aaPredicted RBP eCLIP13.85□□□□□ -0.19
CCDC163-204ENST00000628293 SOGA1O94964 1423 aa13.82□□□□□ -0.2
CCDC163-204ENST00000628293 AQRO60306 1485 aaKnown RBP eCLIP13.8□□□□□ -0.28e-11■■■■□ 25.5
CCDC163-204ENST00000628293 ABCA10Q8WWZ4 1543 aa13.79□□□□□ -0.2
CCDC163-204ENST00000628293 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
CCDC163-204ENST00000628293 PBRM1Q86U86 1689 aa13.77□□□□□ -0.21
CCDC163-204ENST00000628293 TDRD9Q8NDG6 1382 aaKnown RBP13.74□□□□□ -0.21
CCDC163-204ENST00000628293 CHD1O14646 1710 aa13.74□□□□□ -0.21
CCDC163-204ENST00000628293 GAPVD1Q14C86 1478 aa13.7□□□□□ -0.22
CCDC163-204ENST00000628293 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
CCDC163-204ENST00000628293 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
CCDC163-204ENST00000628293 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
CCDC163-204ENST00000628293 ADAMTS12P58397 1594 aa13.64□□□□□ -0.23
CCDC163-204ENST00000628293 ERICH3Q5RHP9 1530 aa13.62□□□□□ -0.23
CCDC163-204ENST00000628293 SYNJ2O15056 1496 aa13.61□□□□□ -0.23
CCDC163-204ENST00000628293 OSCARQ8IYS5 282 aa13.58□□□□□ -0.24
CCDC163-204ENST00000628293 CLASP1Q7Z460 1538 aa13.57□□□□□ -0.24
CCDC163-204ENST00000628293 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
CCDC163-204ENST00000628293 KIF27Q86VH2 1401 aa13.54□□□□□ -0.24
CCDC163-204ENST00000628293 GRIN2AQ12879 1464 aa13.54□□□□□ -0.24
CCDC163-204ENST00000628293 FOXD1Q16676 465 aa13.53□□□□□ -0.24
CCDC163-204ENST00000628293 FHAD1B1AJZ9 1412 aa13.53□□□□□ -0.24
CCDC163-204ENST00000628293 CUL7Q14999 1698 aa13.53□□□□□ -0.24
CCDC163-204ENST00000628293 CEP170Q5SW79 1584 aa13.52□□□□□ -0.25
CCDC163-204ENST00000628293 RIMBP3CA6NJZ7 1639 aa13.51□□□□□ -0.25
CCDC163-204ENST00000628293 RIMBP3BA6NNM3 1639 aa13.51□□□□□ -0.25
CCDC163-204ENST00000628293 RIMBP3Q9UFD9 1639 aa13.51□□□□□ -0.25
CCDC163-204ENST00000628293 FBLN2P98095 1184 aa13.51□□□□□ -0.25
CCDC163-204ENST00000628293 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
CCDC163-204ENST00000628293 IGF1RP08069 1367 aa13.49□□□□□ -0.25
CCDC163-204ENST00000628293 CHMP7Q8WUX9 453 aaPredicted RBP13.49□□□□□ -0.25
CCDC163-204ENST00000628293 NUP160Q12769 1436 aa13.48□□□□□ -0.25
CCDC163-204ENST00000628293 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 281.5 ms