RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 NISCHQ9Y2I1 1504 aa33.77■■■■□ 3
TCF4-262ENST00000628078 ABCC9O60706 1549 aa30.52■■■□□ 2.48
TCF4-262ENST00000628078 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
TCF4-262ENST00000628078 RB1CC1Q8TDY2 1594 aa28.88■■■□□ 2.21
TCF4-262ENST00000628078 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
TCF4-262ENST00000628078 DNAJC5BQ9UF47 199 aa28.76■■■□□ 2.19
TCF4-262ENST00000628078 NACADO15069 1562 aa28.62■■■□□ 2.17
TCF4-262ENST00000628078 PABPN1Q86U42 306 aaKnown RBP eCLIP28.5■■■□□ 2.15
TCF4-262ENST00000628078 UNC13AQ9UPW8 1703 aa28.31■■■□□ 2.12
TCF4-262ENST00000628078 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
TCF4-262ENST00000628078 BICRAQ9NZM4 1560 aa28.08■■■□□ 2.09
TCF4-262ENST00000628078 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
TCF4-262ENST00000628078 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
TCF4-262ENST00000628078 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
TCF4-262ENST00000628078 CC2D2AQ9P2K1 1620 aa27.5■■□□□ 1.99
TCF4-262ENST00000628078 SHROOM4Q9ULL8 1493 aa27.46■■□□□ 1.99
TCF4-262ENST00000628078 CECR2Q9BXF3 1484 aa27.43■■□□□ 1.98
TCF4-262ENST00000628078 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
TCF4-262ENST00000628078 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
TCF4-262ENST00000628078 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
TCF4-262ENST00000628078 SMARCA4P51532 1647 aa26.36■■□□□ 1.81
TCF4-262ENST00000628078 DNAJC5Q9H3Z4 198 aa26.34■■□□□ 1.81
TCF4-262ENST00000628078 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
TCF4-262ENST00000628078 SMARCA2P51531 1590 aa26.27■■□□□ 1.8
TCF4-262ENST00000628078 NESP48681 1621 aa26.21■■□□□ 1.79
TCF4-262ENST00000628078 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
TCF4-262ENST00000628078 BAZ1AQ9NRL2 1556 aaPredicted RBP26.18■■□□□ 1.78
TCF4-262ENST00000628078 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
TCF4-262ENST00000628078 CUX2O14529 1486 aa26.15■■□□□ 1.78
TCF4-262ENST00000628078 MROH2BQ7Z745 1585 aa26.1■■□□□ 1.77
TCF4-262ENST00000628078 PEG3Q9GZU2 1588 aa25.99■■□□□ 1.75
TCF4-262ENST00000628078 LAMC3Q9Y6N6 1575 aa25.86■■□□□ 1.73
TCF4-262ENST00000628078 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
TCF4-262ENST00000628078 WIZO95785 1651 aa25.82■■□□□ 1.72
TCF4-262ENST00000628078 KIF21AQ7Z4S6 1674 aa25.82■■□□□ 1.72
TCF4-262ENST00000628078 PDS5BQ9NTI5 1447 aa25.74■■□□□ 1.71
TCF4-262ENST00000628078 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
TCF4-262ENST00000628078 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
TCF4-262ENST00000628078 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
TCF4-262ENST00000628078 WDR62O43379 1518 aa25.43■■□□□ 1.66
TCF4-262ENST00000628078 CEP164Q9UPV0 1460 aa25.43■■□□□ 1.66
TCF4-262ENST00000628078 FANCD2Q9BXW9 1451 aa25.42■■□□□ 1.66
TCF4-262ENST00000628078 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
TCF4-262ENST00000628078 CFTRP13569 1480 aa25.35■■□□□ 1.65
TCF4-262ENST00000628078 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
TCF4-262ENST00000628078 URB2Q14146 1524 aaKnown RBP25.22■■□□□ 1.63
TCF4-262ENST00000628078 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
TCF4-262ENST00000628078 OSCARQ8IYS5 282 aa25.1■■□□□ 1.61
TCF4-262ENST00000628078 PRDM2Q13029 1718 aa25.08■■□□□ 1.61
TCF4-262ENST00000628078 ZNF608Q9ULD9 1512 aaPredicted RBP24.97■■□□□ 1.59
TCF4-262ENST00000628078 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
TCF4-262ENST00000628078 IFT140Q96RY7 1462 aa24.89■■□□□ 1.58
TCF4-262ENST00000628078 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
TCF4-262ENST00000628078 ABCC8Q09428 1581 aa24.78■■□□□ 1.56
TCF4-262ENST00000628078 AQRO60306 1485 aaKnown RBP eCLIP24.77■■□□□ 1.56
TCF4-262ENST00000628078 EIF4G3O43432 1585 aaKnown RBP24.76■■□□□ 1.55
TCF4-262ENST00000628078 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
TCF4-262ENST00000628078 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
TCF4-262ENST00000628078 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
TCF4-262ENST00000628078 FBLN2P98095 1184 aa24.72■■□□□ 1.55
TCF4-262ENST00000628078 TARBP1Q13395 1621 aaKnown RBP24.69■■□□□ 1.54
TCF4-262ENST00000628078 RAD54L2Q9Y4B4 1467 aa24.67■■□□□ 1.54
TCF4-262ENST00000628078 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
TCF4-262ENST00000628078 CHD1O14646 1710 aa24.64■■□□□ 1.54
TCF4-262ENST00000628078 ARHGEF11O15085 1522 aa24.63■■□□□ 1.53
TCF4-262ENST00000628078 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
TCF4-262ENST00000628078 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
TCF4-262ENST00000628078 SOGA1O94964 1423 aa24.61■■□□□ 1.53
TCF4-262ENST00000628078 SUPT5HO00267 1087 aaKnown RBP24.56■■□□□ 1.52
TCF4-262ENST00000628078 FGD5Q6ZNL6 1462 aa24.53■■□□□ 1.52
TCF4-262ENST00000628078 CUX1P39880 1505 aa24.5■■□□□ 1.51
TCF4-262ENST00000628078 SNAPC4Q5SXM2 1469 aa24.45■■□□□ 1.51
TCF4-262ENST00000628078 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
TCF4-262ENST00000628078 ARAP1Q96P48 1450 aa24.4■■□□□ 1.5
TCF4-262ENST00000628078 TRHP20396 242 aaPredicted RBP24.38■■□□□ 1.49
TCF4-262ENST00000628078 GRIN2BQ13224 1484 aa24.32■■□□□ 1.48
TCF4-262ENST00000628078 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
TCF4-262ENST00000628078 WDR97A6NE52 1622 aa24.28■■□□□ 1.48
TCF4-262ENST00000628078 GAPVD1Q14C86 1478 aa24.27■■□□□ 1.48
TCF4-262ENST00000628078 CLASP1Q7Z460 1538 aa24.26■■□□□ 1.47
TCF4-262ENST00000628078 PBRM1Q86U86 1689 aa24.26■■□□□ 1.47
TCF4-262ENST00000628078 SYNJ1O43426 1573 aa24.25■■□□□ 1.47
TCF4-262ENST00000628078 SYNJ2O15056 1496 aa24.24■■□□□ 1.47
TCF4-262ENST00000628078 ABCA10Q8WWZ4 1543 aa24.17■■□□□ 1.46
TCF4-262ENST00000628078 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
TCF4-262ENST00000628078 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
TCF4-262ENST00000628078 TOP2BQ02880 1626 aa24.03■■□□□ 1.44
TCF4-262ENST00000628078 BIVM-ERCC5R4GMW8 1640 aa24.03■■□□□ 1.44
TCF4-262ENST00000628078 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
TCF4-262ENST00000628078 ERCC6L2Q5T890 1561 aa24.02■■□□□ 1.44
TCF4-262ENST00000628078 ADAMTS12P58397 1594 aa23.99■■□□□ 1.43
TCF4-262ENST00000628078 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
TCF4-262ENST00000628078 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
TCF4-262ENST00000628078 NUP160Q12769 1436 aa23.91■■□□□ 1.42
TCF4-262ENST00000628078 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
TCF4-262ENST00000628078 SHROOM2Q13796 1616 aa23.8■■□□□ 1.4
TCF4-262ENST00000628078 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
TCF4-262ENST00000628078 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
TCF4-262ENST00000628078 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
TCF4-262ENST00000628078 IGF1RP08069 1367 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms