RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 NISCHQ9Y2I1 1504 aa42.98■■■■■ 4.47
TCF4-261ENST00000627784 ABCC9O60706 1549 aa39.25■■■■□ 3.87
TCF4-261ENST00000627784 CCDC180Q9P1Z9 1646 aa38.63■■■■□ 3.77
TCF4-261ENST00000627784 DNAJC5BQ9UF47 199 aa37.36■■■■□ 3.57
TCF4-261ENST00000627784 RB1CC1Q8TDY2 1594 aa37.03■■■■□ 3.52
TCF4-261ENST00000627784 NACADO15069 1562 aa36.68■■■■□ 3.46
TCF4-261ENST00000627784 DCAF8L2P0C7V8 631 aa36.6■■■■□ 3.45
TCF4-261ENST00000627784 PABPN1Q86U42 306 aaKnown RBP eCLIP36.56■■■■□ 3.44
TCF4-261ENST00000627784 UNC13AQ9UPW8 1703 aa36.23■■■■□ 3.39
TCF4-261ENST00000627784 BICRAQ9NZM4 1560 aa36.08■■■■□ 3.37
TCF4-261ENST00000627784 MYO15BQ96JP2 1530 aa36■■■■□ 3.35
TCF4-261ENST00000627784 ZCCHC6Q5VYS8 1495 aaKnown RBP35.51■■■■□ 3.28
TCF4-261ENST00000627784 DCAF1Q9Y4B6 1507 aa35.4■■■■□ 3.26
TCF4-261ENST00000627784 CC2D2AQ9P2K1 1620 aa35.39■■■■□ 3.26
TCF4-261ENST00000627784 CECR2Q9BXF3 1484 aa35.36■■■■□ 3.25
TCF4-261ENST00000627784 SHROOM4Q9ULL8 1493 aa35.36■■■■□ 3.25
TCF4-261ENST00000627784 SCRIBQ14160 1630 aa35.31■■■■□ 3.24
TCF4-261ENST00000627784 EIF4G1Q04637 1599 aaKnown RBP35.19■■■■□ 3.22
TCF4-261ENST00000627784 DNAJC5Q9H3Z4 198 aa34.5■■■■□ 3.11
TCF4-261ENST00000627784 NCAPD3P42695 1498 aa33.94■■■■□ 3.02
TCF4-261ENST00000627784 CUX2O14529 1486 aa33.89■■■■□ 3.02
TCF4-261ENST00000627784 ERCC6Q03468 1493 aa33.84■■■■□ 3.01
TCF4-261ENST00000627784 ATAD2BQ9ULI0 1458 aa33.8■■■■□ 3
TCF4-261ENST00000627784 NESP48681 1621 aa33.63■■■□□ 2.97
TCF4-261ENST00000627784 SMARCA4P51532 1647 aa33.6■■■□□ 2.97
TCF4-261ENST00000627784 SMARCA2P51531 1590 aa33.58■■■□□ 2.97
TCF4-261ENST00000627784 HMGXB3Q12766 1538 aa33.57■■■□□ 2.96
TCF4-261ENST00000627784 BAZ1BQ9UIG0 1483 aaKnown RBP33.4■■■□□ 2.94
TCF4-261ENST00000627784 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
TCF4-261ENST00000627784 THOC2Q8NI27 1593 aaKnown RBP33.27■■■□□ 2.92
TCF4-261ENST00000627784 PEG3Q9GZU2 1588 aa33.25■■■□□ 2.91
TCF4-261ENST00000627784 MROH2BQ7Z745 1585 aa33.17■■■□□ 2.9
TCF4-261ENST00000627784 LAMC3Q9Y6N6 1575 aa33.17■■■□□ 2.9
TCF4-261ENST00000627784 KIF21AQ7Z4S6 1674 aa33.07■■■□□ 2.89
TCF4-261ENST00000627784 PDS5BQ9NTI5 1447 aa33.02■■■□□ 2.88
TCF4-261ENST00000627784 CADPSQ9ULU8 1353 aa32.9■■■□□ 2.86
TCF4-261ENST00000627784 TRIM41Q8WV44 630 aa32.85■■■□□ 2.85
TCF4-261ENST00000627784 MRC2Q9UBG0 1479 aa32.78■■■□□ 2.84
TCF4-261ENST00000627784 WIZO95785 1651 aa32.73■■■□□ 2.83
TCF4-261ENST00000627784 WDR62O43379 1518 aa32.72■■■□□ 2.83
TCF4-261ENST00000627784 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
TCF4-261ENST00000627784 FANCD2Q9BXW9 1451 aa32.52■■■□□ 2.8
TCF4-261ENST00000627784 CFTRP13569 1480 aa32.42■■■□□ 2.78
TCF4-261ENST00000627784 OSCARQ8IYS5 282 aa32.36■■■□□ 2.77
TCF4-261ENST00000627784 RSF1Q96T23 1441 aaPredicted RBP32.33■■■□□ 2.77
TCF4-261ENST00000627784 URB2Q14146 1524 aaKnown RBP32.31■■■□□ 2.76
TCF4-261ENST00000627784 TOP2AP11388 1531 aaKnown RBP32.21■■■□□ 2.75
TCF4-261ENST00000627784 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
TCF4-261ENST00000627784 RIMBP3CA6NJZ7 1639 aa31.96■■■□□ 2.71
TCF4-261ENST00000627784 RIMBP3BA6NNM3 1639 aa31.96■■■□□ 2.71
TCF4-261ENST00000627784 RIMBP3Q9UFD9 1639 aa31.96■■■□□ 2.71
TCF4-261ENST00000627784 CCDC88BA6NC98 1476 aa31.95■■■□□ 2.7
TCF4-261ENST00000627784 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
TCF4-261ENST00000627784 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
TCF4-261ENST00000627784 TOPBP1Q92547 1522 aa31.85■■■□□ 2.69
TCF4-261ENST00000627784 ARHGEF11O15085 1522 aa31.82■■■□□ 2.68
TCF4-261ENST00000627784 EIF4G3O43432 1585 aaKnown RBP31.72■■■□□ 2.67
TCF4-261ENST00000627784 CYB5RLQ6IPT4 315 aa31.7■■■□□ 2.67
TCF4-261ENST00000627784 AQRO60306 1485 aaKnown RBP eCLIP31.68■■■□□ 2.66
TCF4-261ENST00000627784 ABCC8Q09428 1581 aa31.65■■■□□ 2.66
TCF4-261ENST00000627784 DNMBPQ6XZF7 1577 aa31.64■■■□□ 2.66
TCF4-261ENST00000627784 TARBP1Q13395 1621 aaKnown RBP31.59■■■□□ 2.65
TCF4-261ENST00000627784 CHD1O14646 1710 aa31.55■■■□□ 2.64
TCF4-261ENST00000627784 FBLN2P98095 1184 aa31.55■■■□□ 2.64
TCF4-261ENST00000627784 POLA1P09884 1462 aaPredicted RBP31.51■■■□□ 2.63
TCF4-261ENST00000627784 ARAP1Q96P48 1450 aa31.51■■■□□ 2.63
TCF4-261ENST00000627784 RAD54L2Q9Y4B4 1467 aa31.47■■■□□ 2.63
TCF4-261ENST00000627784 TRHP20396 242 aaPredicted RBP31.45■■■□□ 2.63
TCF4-261ENST00000627784 TDRD9Q8NDG6 1382 aaKnown RBP31.42■■■□□ 2.62
TCF4-261ENST00000627784 SOGA1O94964 1423 aa31.37■■■□□ 2.61
TCF4-261ENST00000627784 SNAPC4Q5SXM2 1469 aa31.28■■■□□ 2.6
TCF4-261ENST00000627784 FGD5Q6ZNL6 1462 aa31.25■■■□□ 2.59
TCF4-261ENST00000627784 CLASP1Q7Z460 1538 aa31.21■■■□□ 2.59
TCF4-261ENST00000627784 CHMP7Q8WUX9 453 aaPredicted RBP31.21■■■□□ 2.59
TCF4-261ENST00000627784 CUX1P39880 1505 aa31.18■■■□□ 2.58
TCF4-261ENST00000627784 MAGI1Q96QZ7 1491 aaPredicted RBP31.11■■■□□ 2.57
TCF4-261ENST00000627784 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
TCF4-261ENST00000627784 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
TCF4-261ENST00000627784 GRIN2BQ13224 1484 aa31.09■■■□□ 2.57
TCF4-261ENST00000627784 SYNJ2O15056 1496 aa31.05■■■□□ 2.56
TCF4-261ENST00000627784 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.55
TCF4-261ENST00000627784 PBRM1Q86U86 1689 aa30.9■■■□□ 2.54
TCF4-261ENST00000627784 ABCA10Q8WWZ4 1543 aa30.84■■■□□ 2.53
TCF4-261ENST00000627784 ABCA5Q8WWZ7 1642 aa30.82■■■□□ 2.52
TCF4-261ENST00000627784 AEBP2Q6ZN18 517 aaPredicted RBP30.8■■■□□ 2.52
TCF4-261ENST00000627784 ERCC6L2Q5T890 1561 aa30.79■■■□□ 2.52
TCF4-261ENST00000627784 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
TCF4-261ENST00000627784 CEP170Q5SW79 1584 aa30.65■■■□□ 2.5
TCF4-261ENST00000627784 SUPT5HO00267 1087 aaKnown RBP30.64■■■□□ 2.5
TCF4-261ENST00000627784 NUP160Q12769 1436 aa30.64■■■□□ 2.49
TCF4-261ENST00000627784 WRNQ14191 1432 aaPredicted RBP eCLIP30.63■■■□□ 2.49
TCF4-261ENST00000627784 ADAMTS12P58397 1594 aa30.62■■■□□ 2.49
TCF4-261ENST00000627784 FHAD1B1AJZ9 1412 aa30.53■■■□□ 2.48
TCF4-261ENST00000627784 SHROOM2Q13796 1616 aa30.51■■■□□ 2.47
TCF4-261ENST00000627784 TOP2BQ02880 1626 aa30.48■■■□□ 2.47
TCF4-261ENST00000627784 BIVM-ERCC5R4GMW8 1640 aa30.47■■■□□ 2.47
TCF4-261ENST00000627784 ERICH3Q5RHP9 1530 aa30.41■■■□□ 2.46
TCF4-261ENST00000627784 PRG4Q92954 1404 aaPredicted RBP30.4■■■□□ 2.46
TCF4-261ENST00000627784 JPH4Q96JJ6 628 aa30.38■■■□□ 2.45
TCF4-261ENST00000627784 KIF13AQ9H1H9 1805 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms