RNA–Protein interactions for RNA: ENST00000627441.2

SPTAN1-212, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-212ENST00000627441 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
SPTAN1-212ENST00000627441 ABCC9O60706 1549 aa21.33■■□□□ 1
SPTAN1-212ENST00000627441 DNAJC5BQ9UF47 199 aa21.01■□□□□ 0.95
SPTAN1-212ENST00000627441 CCDC180Q9P1Z9 1646 aa20.23■□□□□ 0.83
SPTAN1-212ENST00000627441 DNAJC5Q9H3Z4 198 aa19.92■□□□□ 0.78
SPTAN1-212ENST00000627441 RB1CC1Q8TDY2 1594 aa19.73■□□□□ 0.75
SPTAN1-212ENST00000627441 PABPN1Q86U42 306 aaKnown RBP eCLIP19.65■□□□□ 0.74
SPTAN1-212ENST00000627441 UNC13AQ9UPW8 1703 aa19.54■□□□□ 0.72
SPTAN1-212ENST00000627441 BICRAQ9NZM4 1560 aa19.34■□□□□ 0.69
SPTAN1-212ENST00000627441 NACADO15069 1562 aa19.3■□□□□ 0.68
SPTAN1-212ENST00000627441 CECR2Q9BXF3 1484 aa19.26■□□□□ 0.67
SPTAN1-212ENST00000627441 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
SPTAN1-212ENST00000627441 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
SPTAN1-212ENST00000627441 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.61
SPTAN1-212ENST00000627441 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
SPTAN1-212ENST00000627441 CUX2O14529 1486 aa18.71■□□□□ 0.59
SPTAN1-212ENST00000627441 TRIM41Q8WV44 630 aa18.67■□□□□ 0.58
SPTAN1-212ENST00000627441 MYO15BQ96JP2 1530 aa18.62■□□□□ 0.57
SPTAN1-212ENST00000627441 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
SPTAN1-212ENST00000627441 ERCC6Q03468 1493 aa18.39■□□□□ 0.53
SPTAN1-212ENST00000627441 THOC2Q8NI27 1593 aaKnown RBP18.1■□□□□ 0.49
SPTAN1-212ENST00000627441 NESP48681 1621 aa18.07■□□□□ 0.48
SPTAN1-212ENST00000627441 DCAF1Q9Y4B6 1507 aa18.02■□□□□ 0.47
SPTAN1-212ENST00000627441 ZCCHC6Q5VYS8 1495 aaKnown RBP18.01■□□□□ 0.47
SPTAN1-212ENST00000627441 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
SPTAN1-212ENST00000627441 KIF21AQ7Z4S6 1674 aa17.84■□□□□ 0.45
SPTAN1-212ENST00000627441 NCAPD3P42695 1498 aa17.82■□□□□ 0.44
SPTAN1-212ENST00000627441 BAZ1AQ9NRL2 1556 aaPredicted RBP17.8■□□□□ 0.44
SPTAN1-212ENST00000627441 RIMBP3CA6NJZ7 1639 aa17.72■□□□□ 0.43
SPTAN1-212ENST00000627441 RIMBP3BA6NNM3 1639 aa17.72■□□□□ 0.43
SPTAN1-212ENST00000627441 RIMBP3Q9UFD9 1639 aa17.72■□□□□ 0.43
SPTAN1-212ENST00000627441 AEBP2Q6ZN18 517 aaPredicted RBP17.7■□□□□ 0.42
SPTAN1-212ENST00000627441 ATAD2BQ9ULI0 1458 aa17.68■□□□□ 0.42
SPTAN1-212ENST00000627441 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
SPTAN1-212ENST00000627441 LAMC3Q9Y6N6 1575 aa17.63■□□□□ 0.41
SPTAN1-212ENST00000627441 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
SPTAN1-212ENST00000627441 WDR62O43379 1518 aa17.52■□□□□ 0.4
SPTAN1-212ENST00000627441 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
SPTAN1-212ENST00000627441 MRC2Q9UBG0 1479 aa17.48■□□□□ 0.39
SPTAN1-212ENST00000627441 PDS5BQ9NTI5 1447 aa17.47■□□□□ 0.39
SPTAN1-212ENST00000627441 TRHP20396 242 aaPredicted RBP17.47■□□□□ 0.39
SPTAN1-212ENST00000627441 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
SPTAN1-212ENST00000627441 BAZ1BQ9UIG0 1483 aaKnown RBP17.43■□□□□ 0.38
SPTAN1-212ENST00000627441 CYB5RLQ6IPT4 315 aa17.34■□□□□ 0.37
SPTAN1-212ENST00000627441 ILDR1Q86SU0 546 aaPredicted RBP17.29■□□□□ 0.36
SPTAN1-212ENST00000627441 ARAP1Q96P48 1450 aa17.27■□□□□ 0.36
SPTAN1-212ENST00000627441 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
SPTAN1-212ENST00000627441 CADPSQ9ULU8 1353 aa17.22■□□□□ 0.35
SPTAN1-212ENST00000627441 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
SPTAN1-212ENST00000627441 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
SPTAN1-212ENST00000627441 URB2Q14146 1524 aaKnown RBP17.09■□□□□ 0.33
SPTAN1-212ENST00000627441 CHD1O14646 1710 aa17.07■□□□□ 0.32
SPTAN1-212ENST00000627441 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
SPTAN1-212ENST00000627441 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
SPTAN1-212ENST00000627441 EIF4G3O43432 1585 aaKnown RBP16.94■□□□□ 0.3
SPTAN1-212ENST00000627441 RSF1Q96T23 1441 aaPredicted RBP16.93■□□□□ 0.3
SPTAN1-212ENST00000627441 IFT140Q96RY7 1462 aa16.86■□□□□ 0.29
SPTAN1-212ENST00000627441 CFTRP13569 1480 aa16.83■□□□□ 0.28
SPTAN1-212ENST00000627441 WIZO95785 1651 aa16.81■□□□□ 0.28
SPTAN1-212ENST00000627441 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
SPTAN1-212ENST00000627441 FBLN2P98095 1184 aa16.74■□□□□ 0.27
SPTAN1-212ENST00000627441 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPTAN1-212ENST00000627441 PRDM2Q13029 1718 aa16.72■□□□□ 0.27
SPTAN1-212ENST00000627441 KDM4FA0A1W2PPD8 638 aa16.7■□□□□ 0.26
SPTAN1-212ENST00000627441 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
SPTAN1-212ENST00000627441 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
SPTAN1-212ENST00000627441 TARBP1Q13395 1621 aaKnown RBP16.66■□□□□ 0.26
SPTAN1-212ENST00000627441 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
SPTAN1-212ENST00000627441 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
SPTAN1-212ENST00000627441 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
SPTAN1-212ENST00000627441 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
SPTAN1-212ENST00000627441 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
SPTAN1-212ENST00000627441 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
SPTAN1-212ENST00000627441 HECW2Q9P2P5 1572 aa16.49■□□□□ 0.23
SPTAN1-212ENST00000627441 RAD54L2Q9Y4B4 1467 aa16.45■□□□□ 0.22
SPTAN1-212ENST00000627441 POLA1P09884 1462 aaPredicted RBP16.43■□□□□ 0.22
SPTAN1-212ENST00000627441 TDRD9Q8NDG6 1382 aaKnown RBP16.43■□□□□ 0.22
SPTAN1-212ENST00000627441 TOP2AP11388 1531 aaKnown RBP16.41■□□□□ 0.22
SPTAN1-212ENST00000627441 ABCC8Q09428 1581 aa16.39■□□□□ 0.21
SPTAN1-212ENST00000627441 KDM6BO15054 1643 aa16.39■□□□□ 0.21
SPTAN1-212ENST00000627441 CHMP7Q8WUX9 453 aaPredicted RBP16.39■□□□□ 0.21
SPTAN1-212ENST00000627441 FBXO41Q8TF61 875 aa16.35■□□□□ 0.21
SPTAN1-212ENST00000627441 MAGI1Q96QZ7 1491 aaPredicted RBP16.35■□□□□ 0.21
SPTAN1-212ENST00000627441 SYNJ2O15056 1496 aa16.33■□□□□ 0.2
SPTAN1-212ENST00000627441 LMTK3Q96Q04 1460 aa16.33■□□□□ 0.2
SPTAN1-212ENST00000627441 ADGRL1O94910 1474 aa16.32■□□□□ 0.2
SPTAN1-212ENST00000627441 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
SPTAN1-212ENST00000627441 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
SPTAN1-212ENST00000627441 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
SPTAN1-212ENST00000627441 DIP2BQ9P265 1576 aa16.28■□□□□ 0.2
SPTAN1-212ENST00000627441 ABCC10Q5T3U5 1492 aa16.27■□□□□ 0.19
SPTAN1-212ENST00000627441 SOGA1O94964 1423 aa16.27■□□□□ 0.19
SPTAN1-212ENST00000627441 WDR97A6NE52 1622 aa16.27■□□□□ 0.19
SPTAN1-212ENST00000627441 FAM69CQ0P6D2 419 aa16.26■□□□□ 0.19
SPTAN1-212ENST00000627441 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
SPTAN1-212ENST00000627441 GRIN2BQ13224 1484 aa16.24■□□□□ 0.19
SPTAN1-212ENST00000627441 ILDR2Q71H61 639 aa16.24■□□□□ 0.19
SPTAN1-212ENST00000627441 FGD5Q6ZNL6 1462 aa16.19■□□□□ 0.18
SPTAN1-212ENST00000627441 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
SPTAN1-212ENST00000627441 SOCS7O14512 581 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms