RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 NISCHQ9Y2I1 1504 aa22.22■■□□□ 1.15
CPSF7-226ENST00000626926 CCDC180Q9P1Z9 1646 aa20■□□□□ 0.79
CPSF7-226ENST00000626926 ABCC9O60706 1549 aa19.69■□□□□ 0.74
CPSF7-226ENST00000626926 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
CPSF7-226ENST00000626926 NACADO15069 1562 aa18.83■□□□□ 0.6
CPSF7-226ENST00000626926 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
CPSF7-226ENST00000626926 UNC13AQ9UPW8 1703 aa18.53■□□□□ 0.56
CPSF7-226ENST00000626926 ZCCHC6Q5VYS8 1495 aaKnown RBP18.48■□□□□ 0.55
CPSF7-226ENST00000626926 DCAF1Q9Y4B6 1507 aa18.46■□□□□ 0.55
CPSF7-226ENST00000626926 DCAF8L2P0C7V8 631 aa18.4■□□□□ 0.54
CPSF7-226ENST00000626926 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
CPSF7-226ENST00000626926 DNAJC5BQ9UF47 199 aa18.35■□□□□ 0.53
CPSF7-226ENST00000626926 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
CPSF7-226ENST00000626926 SHROOM4Q9ULL8 1493 aa18.23■□□□□ 0.51
CPSF7-226ENST00000626926 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
CPSF7-226ENST00000626926 EIF4G1Q04637 1599 aaKnown RBP17.89■□□□□ 0.45
CPSF7-226ENST00000626926 CC2D2AQ9P2K1 1620 aa17.88■□□□□ 0.45
CPSF7-226ENST00000626926 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.44
CPSF7-226ENST00000626926 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
CPSF7-226ENST00000626926 SMARCA4P51532 1647 aa17.33■□□□□ 0.37
CPSF7-226ENST00000626926 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
CPSF7-226ENST00000626926 ATAD2BQ9ULI0 1458 aa17.29■□□□□ 0.36
CPSF7-226ENST00000626926 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
CPSF7-226ENST00000626926 BAZ1AQ9NRL2 1556 aaPredicted RBP17.25■□□□□ 0.35
CPSF7-226ENST00000626926 PEG3Q9GZU2 1588 aa17.24■□□□□ 0.35
CPSF7-226ENST00000626926 BAZ1BQ9UIG0 1483 aaKnown RBP17.1■□□□□ 0.33
CPSF7-226ENST00000626926 MROH2BQ7Z745 1585 aa17.09■□□□□ 0.33
CPSF7-226ENST00000626926 CUX2O14529 1486 aa17.04■□□□□ 0.32
CPSF7-226ENST00000626926 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
CPSF7-226ENST00000626926 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
CPSF7-226ENST00000626926 NESP48681 1621 aa16.96■□□□□ 0.31
CPSF7-226ENST00000626926 THOC2Q8NI27 1593 aaKnown RBP16.89■□□□□ 0.3
CPSF7-226ENST00000626926 WIZO95785 1651 aa16.89■□□□□ 0.29
CPSF7-226ENST00000626926 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
CPSF7-226ENST00000626926 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
CPSF7-226ENST00000626926 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
CPSF7-226ENST00000626926 CADPSQ9ULU8 1353 aa16.77■□□□□ 0.28
CPSF7-226ENST00000626926 RSF1Q96T23 1441 aaPredicted RBP16.77■□□□□ 0.27
CPSF7-226ENST00000626926 TOP2AP11388 1531 aaKnown RBP16.73■□□□□ 0.27
CPSF7-226ENST00000626926 WDR62O43379 1518 aa16.68■□□□□ 0.26
CPSF7-226ENST00000626926 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
CPSF7-226ENST00000626926 CFTRP13569 1480 aa16.66■□□□□ 0.26
CPSF7-226ENST00000626926 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
CPSF7-226ENST00000626926 PRDM2Q13029 1718 aa16.6■□□□□ 0.25
CPSF7-226ENST00000626926 FANCD2Q9BXW9 1451 aa16.59■□□□□ 0.25
CPSF7-226ENST00000626926 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
CPSF7-226ENST00000626926 URB2Q14146 1524 aaKnown RBP16.46■□□□□ 0.23
CPSF7-226ENST00000626926 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
CPSF7-226ENST00000626926 ABCC8Q09428 1581 aa16.3■□□□□ 0.2
CPSF7-226ENST00000626926 DNMBPQ6XZF7 1577 aa16.29■□□□□ 0.2
CPSF7-226ENST00000626926 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
CPSF7-226ENST00000626926 ZNF608Q9ULD9 1512 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-226ENST00000626926 TARBP1Q13395 1621 aaKnown RBP16.21■□□□□ 0.19
CPSF7-226ENST00000626926 EIF4G3O43432 1585 aaKnown RBP16.2■□□□□ 0.18
CPSF7-226ENST00000626926 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-226ENST00000626926 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
CPSF7-226ENST00000626926 WDR97A6NE52 1622 aa16.12■□□□□ 0.17
CPSF7-226ENST00000626926 CUX1P39880 1505 aa16.06■□□□□ 0.16
CPSF7-226ENST00000626926 CHD1O14646 1710 aa16.05■□□□□ 0.16
CPSF7-226ENST00000626926 AQRO60306 1485 aaKnown RBP eCLIP16.04■□□□□ 0.168e-8■■■■□ 24.7
CPSF7-226ENST00000626926 FGD5Q6ZNL6 1462 aa16.04■□□□□ 0.16
CPSF7-226ENST00000626926 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.16
CPSF7-226ENST00000626926 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.16
CPSF7-226ENST00000626926 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.16
CPSF7-226ENST00000626926 RAD54L2Q9Y4B4 1467 aa16.02■□□□□ 0.15
CPSF7-226ENST00000626926 SOGA1O94964 1423 aa16.01■□□□□ 0.15
CPSF7-226ENST00000626926 ARHGEF11O15085 1522 aa15.99■□□□□ 0.15
CPSF7-226ENST00000626926 TRIM41Q8WV44 630 aa15.97■□□□□ 0.15
CPSF7-226ENST00000626926 MAGI1Q96QZ7 1491 aaPredicted RBP15.95■□□□□ 0.14
CPSF7-226ENST00000626926 TDRD9Q8NDG6 1382 aaKnown RBP15.93■□□□□ 0.14
CPSF7-226ENST00000626926 SNAPC4Q5SXM2 1469 aa15.92■□□□□ 0.14
CPSF7-226ENST00000626926 ABCA5Q8WWZ7 1642 aa15.92■□□□□ 0.14
CPSF7-226ENST00000626926 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
CPSF7-226ENST00000626926 ABCA10Q8WWZ4 1543 aa15.91■□□□□ 0.14
CPSF7-226ENST00000626926 PBRM1Q86U86 1689 aa15.91■□□□□ 0.14
CPSF7-226ENST00000626926 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
CPSF7-226ENST00000626926 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
CPSF7-226ENST00000626926 SUPT5HO00267 1087 aaKnown RBP15.88■□□□□ 0.13
CPSF7-226ENST00000626926 TOP2BQ02880 1626 aa15.87■□□□□ 0.13
CPSF7-226ENST00000626926 SYNJ2O15056 1496 aa15.86■□□□□ 0.13
CPSF7-226ENST00000626926 SYNJ1O43426 1573 aa15.86■□□□□ 0.13
CPSF7-226ENST00000626926 GAPVD1Q14C86 1478 aa15.85■□□□□ 0.13
CPSF7-226ENST00000626926 ARAP1Q96P48 1450 aa15.83■□□□□ 0.12
CPSF7-226ENST00000626926 WRNQ14191 1432 aaPredicted RBP eCLIP15.81■□□□□ 0.12
CPSF7-226ENST00000626926 FBLN2P98095 1184 aa15.78■□□□□ 0.12
CPSF7-226ENST00000626926 ADAMTS12P58397 1594 aa15.77■□□□□ 0.11
CPSF7-226ENST00000626926 CHMP7Q8WUX9 453 aaPredicted RBP15.75■□□□□ 0.11
CPSF7-226ENST00000626926 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
CPSF7-226ENST00000626926 GRIN2AQ12879 1464 aa15.72■□□□□ 0.11
CPSF7-226ENST00000626926 CYB5RLQ6IPT4 315 aa15.7■□□□□ 0.1
CPSF7-226ENST00000626926 NUP160Q12769 1436 aa15.69■□□□□ 0.1
CPSF7-226ENST00000626926 CEP170Q5SW79 1584 aa15.67■□□□□ 0.1
CPSF7-226ENST00000626926 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
CPSF7-226ENST00000626926 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
CPSF7-226ENST00000626926 ERCC6L2Q5T890 1561 aa15.58■□□□□ 0.09
CPSF7-226ENST00000626926 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
CPSF7-226ENST00000626926 CUL7Q14999 1698 aa15.53■□□□□ 0.08
CPSF7-226ENST00000626926 KIF27Q86VH2 1401 aa15.49■□□□□ 0.07
CPSF7-226ENST00000626926 IGF1RP08069 1367 aa15.46■□□□□ 0.07
CPSF7-226ENST00000626926 PRG4Q92954 1404 aaPredicted RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms