RNA–Protein interactions for RNA: ENST00000626684.1

KCNQ2-211, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 3

Gene KCNQ2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-211ENST00000626684 NISCHQ9Y2I1 1504 aa48.07■■■■■ 5.29
KCNQ2-211ENST00000626684 CCDC180Q9P1Z9 1646 aa43.31■■■■■ 4.52
KCNQ2-211ENST00000626684 ABCC9O60706 1549 aa43.12■■■■■ 4.49
KCNQ2-211ENST00000626684 RB1CC1Q8TDY2 1594 aa41.14■■■■■ 4.18
KCNQ2-211ENST00000626684 NACADO15069 1562 aa40.85■■■■■ 4.13
KCNQ2-211ENST00000626684 DNAJC5BQ9UF47 199 aa40.36■■■■■ 4.05
KCNQ2-211ENST00000626684 MYO15BQ96JP2 1530 aa40.32■■■■■ 4.05
KCNQ2-211ENST00000626684 UNC13AQ9UPW8 1703 aa40.31■■■■■ 4.04
KCNQ2-211ENST00000626684 DCAF8L2P0C7V8 631 aa40.28■■■■■ 4.04
KCNQ2-211ENST00000626684 PABPN1Q86U42 306 aaKnown RBP eCLIP40.01■■■■■ 4
KCNQ2-211ENST00000626684 BICRAQ9NZM4 1560 aa39.96■■■■□ 3.99
KCNQ2-211ENST00000626684 ZCCHC6Q5VYS8 1495 aaKnown RBP39.9■■■■□ 3.98
KCNQ2-211ENST00000626684 DCAF1Q9Y4B6 1507 aa39.79■■■■□ 3.96
KCNQ2-211ENST00000626684 SHROOM4Q9ULL8 1493 aa39.49■■■■□ 3.91
KCNQ2-211ENST00000626684 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
KCNQ2-211ENST00000626684 CC2D2AQ9P2K1 1620 aa39.03■■■■□ 3.84
KCNQ2-211ENST00000626684 EIF4G1Q04637 1599 aaKnown RBP38.96■■■■□ 3.83
KCNQ2-211ENST00000626684 CECR2Q9BXF3 1484 aa38.86■■■■□ 3.81
KCNQ2-211ENST00000626684 NCAPD3P42695 1498 aa37.66■■■■□ 3.62
KCNQ2-211ENST00000626684 SMARCA4P51532 1647 aa37.58■■■■□ 3.61
KCNQ2-211ENST00000626684 ATAD2BQ9ULI0 1458 aa37.53■■■■□ 3.6
KCNQ2-211ENST00000626684 SMARCA2P51531 1590 aa37.48■■■■□ 3.59
KCNQ2-211ENST00000626684 HMGXB3Q12766 1538 aa37.48■■■■□ 3.59
KCNQ2-211ENST00000626684 BAZ1AQ9NRL2 1556 aaPredicted RBP37.35■■■■□ 3.57
KCNQ2-211ENST00000626684 CUX2O14529 1486 aa37.26■■■■□ 3.56
KCNQ2-211ENST00000626684 PEG3Q9GZU2 1588 aa37.25■■■■□ 3.55
KCNQ2-211ENST00000626684 ERCC6Q03468 1493 aa37.24■■■■□ 3.55
KCNQ2-211ENST00000626684 BAZ1BQ9UIG0 1483 aaKnown RBP37.18■■■■□ 3.54
KCNQ2-211ENST00000626684 DNAJC5Q9H3Z4 198 aa37.11■■■■□ 3.53
KCNQ2-211ENST00000626684 NESP48681 1621 aa37.05■■■■□ 3.52
KCNQ2-211ENST00000626684 MROH2BQ7Z745 1585 aa37.03■■■■□ 3.52
KCNQ2-211ENST00000626684 LAMC3Q9Y6N6 1575 aa36.88■■■■□ 3.49
KCNQ2-211ENST00000626684 THOC2Q8NI27 1593 aaKnown RBP36.83■■■■□ 3.49
KCNQ2-211ENST00000626684 KIF21AQ7Z4S6 1674 aa36.7■■■■□ 3.47
KCNQ2-211ENST00000626684 WIZO95785 1651 aa36.61■■■■□ 3.45
KCNQ2-211ENST00000626684 PDS5BQ9NTI5 1447 aa36.57■■■■□ 3.44
KCNQ2-211ENST00000626684 CADPSQ9ULU8 1353 aa36.45■■■■□ 3.43
KCNQ2-211ENST00000626684 MRC2Q9UBG0 1479 aa36.31■■■■□ 3.4
KCNQ2-211ENST00000626684 WDR62O43379 1518 aa36.29■■■■□ 3.4
KCNQ2-211ENST00000626684 RSF1Q96T23 1441 aaPredicted RBP36.21■■■■□ 3.39
KCNQ2-211ENST00000626684 TOP2AP11388 1531 aaKnown RBP36.18■■■■□ 3.38
KCNQ2-211ENST00000626684 CEP164Q9UPV0 1460 aa36.16■■■■□ 3.38
KCNQ2-211ENST00000626684 CFTRP13569 1480 aa36.1■■■■□ 3.37
KCNQ2-211ENST00000626684 FANCD2Q9BXW9 1451 aa36.09■■■■□ 3.37
KCNQ2-211ENST00000626684 PRDM2Q13029 1718 aa35.93■■■■□ 3.34
KCNQ2-211ENST00000626684 URB2Q14146 1524 aaKnown RBP35.82■■■■□ 3.32
KCNQ2-211ENST00000626684 CCDC88BA6NC98 1476 aa35.67■■■■□ 3.3
KCNQ2-211ENST00000626684 TOPBP1Q92547 1522 aa35.42■■■■□ 3.26
KCNQ2-211ENST00000626684 IFT140Q96RY7 1462 aa35.42■■■■□ 3.26
KCNQ2-211ENST00000626684 TRIM41Q8WV44 630 aa35.4■■■■□ 3.26
KCNQ2-211ENST00000626684 OSCARQ8IYS5 282 aa35.36■■■■□ 3.25
KCNQ2-211ENST00000626684 DNMBPQ6XZF7 1577 aa35.34■■■■□ 3.25
KCNQ2-211ENST00000626684 ZNF608Q9ULD9 1512 aaPredicted RBP35.34■■■■□ 3.25
KCNQ2-211ENST00000626684 ABCC8Q09428 1581 aa35.34■■■■□ 3.25
KCNQ2-211ENST00000626684 EIF4G3O43432 1585 aaKnown RBP35.26■■■■□ 3.24
KCNQ2-211ENST00000626684 TARBP1Q13395 1621 aaKnown RBP35.18■■■■□ 3.22
KCNQ2-211ENST00000626684 RIMBP3CA6NJZ7 1639 aa35.1■■■■□ 3.21
KCNQ2-211ENST00000626684 RIMBP3BA6NNM3 1639 aa35.1■■■■□ 3.21
KCNQ2-211ENST00000626684 RIMBP3Q9UFD9 1639 aa35.1■■■■□ 3.21
KCNQ2-211ENST00000626684 POLA1P09884 1462 aaPredicted RBP35.06■■■■□ 3.2
KCNQ2-211ENST00000626684 CHD1O14646 1710 aa35.01■■■■□ 3.2
KCNQ2-211ENST00000626684 AQRO60306 1485 aaKnown RBP eCLIP34.97■■■■□ 3.19
KCNQ2-211ENST00000626684 ARHGEF11O15085 1522 aa34.97■■■■□ 3.19
KCNQ2-211ENST00000626684 WDR97A6NE52 1622 aa34.88■■■■□ 3.17
KCNQ2-211ENST00000626684 RAD54L2Q9Y4B4 1467 aa34.86■■■■□ 3.17
KCNQ2-211ENST00000626684 FGD5Q6ZNL6 1462 aa34.83■■■■□ 3.17
KCNQ2-211ENST00000626684 CUX1P39880 1505 aa34.81■■■■□ 3.16
KCNQ2-211ENST00000626684 SOGA1O94964 1423 aa34.81■■■■□ 3.16
KCNQ2-211ENST00000626684 TDRD9Q8NDG6 1382 aaKnown RBP34.72■■■■□ 3.15
KCNQ2-211ENST00000626684 SNAPC4Q5SXM2 1469 aa34.69■■■■□ 3.14
KCNQ2-211ENST00000626684 MAGI1Q96QZ7 1491 aaPredicted RBP34.63■■■■□ 3.13
KCNQ2-211ENST00000626684 FBLN2P98095 1184 aa34.62■■■■□ 3.13
KCNQ2-211ENST00000626684 ARAP1Q96P48 1450 aa34.62■■■■□ 3.13
KCNQ2-211ENST00000626684 CLASP1Q7Z460 1538 aa34.6■■■■□ 3.13
KCNQ2-211ENST00000626684 GRIN2BQ13224 1484 aa34.58■■■■□ 3.13
KCNQ2-211ENST00000626684 PBRM1Q86U86 1689 aa34.57■■■■□ 3.13
KCNQ2-211ENST00000626684 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
KCNQ2-211ENST00000626684 CYB5RLQ6IPT4 315 aa34.51■■■■□ 3.12
KCNQ2-211ENST00000626684 SYNJ2O15056 1496 aa34.5■■■■□ 3.11
KCNQ2-211ENST00000626684 ABCA5Q8WWZ7 1642 aa34.48■■■■□ 3.11
KCNQ2-211ENST00000626684 ABCA10Q8WWZ4 1543 aa34.45■■■■□ 3.11
KCNQ2-211ENST00000626684 GAPVD1Q14C86 1478 aa34.44■■■■□ 3.1
KCNQ2-211ENST00000626684 CHMP7Q8WUX9 453 aaPredicted RBP34.4■■■■□ 3.1
KCNQ2-211ENST00000626684 SUPT5HO00267 1087 aaKnown RBP34.39■■■■□ 3.1
KCNQ2-211ENST00000626684 BIVM-ERCC5R4GMW8 1640 aa34.33■■■■□ 3.09
KCNQ2-211ENST00000626684 TOP2BQ02880 1626 aa34.3■■■■□ 3.08
KCNQ2-211ENST00000626684 WRNQ14191 1432 aaPredicted RBP eCLIP34.25■■■■□ 3.07
KCNQ2-211ENST00000626684 ADAMTS12P58397 1594 aa34.22■■■■□ 3.07
KCNQ2-211ENST00000626684 GRIN2AQ12879 1464 aa34.17■■■■□ 3.06
KCNQ2-211ENST00000626684 TRHP20396 242 aaPredicted RBP34.11■■■■□ 3.05
KCNQ2-211ENST00000626684 CEP170Q5SW79 1584 aa34.08■■■■□ 3.05
KCNQ2-211ENST00000626684 NUP160Q12769 1436 aa34.05■■■■□ 3.04
KCNQ2-211ENST00000626684 ERICH3Q5RHP9 1530 aa34.04■■■■□ 3.04
KCNQ2-211ENST00000626684 FHAD1B1AJZ9 1412 aa34■■■■□ 3.03
KCNQ2-211ENST00000626684 ERCC6L2Q5T890 1561 aa33.99■■■■□ 3.03
KCNQ2-211ENST00000626684 SHROOM2Q13796 1616 aa33.99■■■■□ 3.03
KCNQ2-211ENST00000626684 RUSC2Q8N2Y8 1516 aa33.76■■■■□ 3
KCNQ2-211ENST00000626684 PRG4Q92954 1404 aaPredicted RBP33.64■■■□□ 2.98
KCNQ2-211ENST00000626684 CUL7Q14999 1698 aa33.6■■■□□ 2.97
KCNQ2-211ENST00000626684 KIF13AQ9H1H9 1805 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 273.4 ms