RNA–Protein interactions for RNA: ENST00000626422.2

MECP2-215, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-215ENST00000626422 NISCHQ9Y2I1 1504 aa31.88■■■□□ 2.69
MECP2-215ENST00000626422 ABCC9O60706 1549 aa29.01■■■□□ 2.23
MECP2-215ENST00000626422 CCDC180Q9P1Z9 1646 aa28.71■■■□□ 2.19
MECP2-215ENST00000626422 DNAJC5BQ9UF47 199 aa27.54■■■□□ 2
MECP2-215ENST00000626422 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
MECP2-215ENST00000626422 NACADO15069 1562 aa27.18■■□□□ 1.94
MECP2-215ENST00000626422 DCAF8L2P0C7V8 631 aa27.05■■□□□ 1.92
MECP2-215ENST00000626422 PABPN1Q86U42 306 aaKnown RBP eCLIP26.99■■□□□ 1.91
MECP2-215ENST00000626422 UNC13AQ9UPW8 1703 aa26.97■■□□□ 1.91
MECP2-215ENST00000626422 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
MECP2-215ENST00000626422 MYO15BQ96JP2 1530 aa26.68■■□□□ 1.86
MECP2-215ENST00000626422 ZCCHC6Q5VYS8 1495 aaKnown RBP26.35■■□□□ 1.81
MECP2-215ENST00000626422 DCAF1Q9Y4B6 1507 aa26.26■■□□□ 1.79
MECP2-215ENST00000626422 CC2D2AQ9P2K1 1620 aa26.21■■□□□ 1.79
MECP2-215ENST00000626422 SCRIBQ14160 1630 aa26.19■■□□□ 1.78
MECP2-215ENST00000626422 SHROOM4Q9ULL8 1493 aa26.17■■□□□ 1.78
MECP2-215ENST00000626422 CECR2Q9BXF3 1484 aa26.12■■□□□ 1.77
MECP2-215ENST00000626422 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
MECP2-215ENST00000626422 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.66
MECP2-215ENST00000626422 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
MECP2-215ENST00000626422 CUX2O14529 1486 aa25.03■■□□□ 1.6
MECP2-215ENST00000626422 ATAD2BQ9ULI0 1458 aa25.02■■□□□ 1.6
MECP2-215ENST00000626422 ERCC6Q03468 1493 aa25■■□□□ 1.59
MECP2-215ENST00000626422 SMARCA4P51532 1647 aa24.94■■□□□ 1.58
MECP2-215ENST00000626422 NESP48681 1621 aa24.89■■□□□ 1.57
MECP2-215ENST00000626422 SMARCA2P51531 1590 aa24.88■■□□□ 1.57
MECP2-215ENST00000626422 HMGXB3Q12766 1538 aa24.88■■□□□ 1.57
MECP2-215ENST00000626422 BAZ1BQ9UIG0 1483 aaKnown RBP24.73■■□□□ 1.55
MECP2-215ENST00000626422 BAZ1AQ9NRL2 1556 aaPredicted RBP24.72■■□□□ 1.55
MECP2-215ENST00000626422 PEG3Q9GZU2 1588 aa24.67■■□□□ 1.54
MECP2-215ENST00000626422 THOC2Q8NI27 1593 aaKnown RBP24.66■■□□□ 1.54
MECP2-215ENST00000626422 MROH2BQ7Z745 1585 aa24.61■■□□□ 1.53
MECP2-215ENST00000626422 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
MECP2-215ENST00000626422 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
MECP2-215ENST00000626422 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
MECP2-215ENST00000626422 WIZO95785 1651 aa24.33■■□□□ 1.49
MECP2-215ENST00000626422 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
MECP2-215ENST00000626422 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
MECP2-215ENST00000626422 WDR62O43379 1518 aa24.21■■□□□ 1.47
MECP2-215ENST00000626422 TRIM41Q8WV44 630 aa24.18■■□□□ 1.46
MECP2-215ENST00000626422 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
MECP2-215ENST00000626422 FANCD2Q9BXW9 1451 aa24.07■■□□□ 1.44
MECP2-215ENST00000626422 CFTRP13569 1480 aa24■■□□□ 1.43
MECP2-215ENST00000626422 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
MECP2-215ENST00000626422 URB2Q14146 1524 aaKnown RBP23.93■■□□□ 1.42
MECP2-215ENST00000626422 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
MECP2-215ENST00000626422 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
MECP2-215ENST00000626422 PRDM2Q13029 1718 aa23.8■■□□□ 1.4
MECP2-215ENST00000626422 CCDC88BA6NC98 1476 aa23.69■■□□□ 1.38
MECP2-215ENST00000626422 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
MECP2-215ENST00000626422 RIMBP3CA6NJZ7 1639 aa23.66■■□□□ 1.38
MECP2-215ENST00000626422 RIMBP3BA6NNM3 1639 aa23.66■■□□□ 1.38
MECP2-215ENST00000626422 RIMBP3Q9UFD9 1639 aa23.66■■□□□ 1.38
MECP2-215ENST00000626422 IFT140Q96RY7 1462 aa23.61■■□□□ 1.37
MECP2-215ENST00000626422 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
MECP2-215ENST00000626422 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
MECP2-215ENST00000626422 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
MECP2-215ENST00000626422 DNMBPQ6XZF7 1577 aa23.47■■□□□ 1.35
MECP2-215ENST00000626422 ABCC8Q09428 1581 aa23.45■■□□□ 1.34
MECP2-215ENST00000626422 CHD1O14646 1710 aa23.45■■□□□ 1.34
MECP2-215ENST00000626422 TARBP1Q13395 1621 aaKnown RBP23.44■■□□□ 1.34
MECP2-215ENST00000626422 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
MECP2-215ENST00000626422 CYB5RLQ6IPT4 315 aa23.38■■□□□ 1.33
MECP2-215ENST00000626422 POLA1P09884 1462 aaPredicted RBP23.34■■□□□ 1.33
MECP2-215ENST00000626422 FBLN2P98095 1184 aa23.3■■□□□ 1.32
MECP2-215ENST00000626422 RAD54L2Q9Y4B4 1467 aa23.3■■□□□ 1.32
MECP2-215ENST00000626422 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
MECP2-215ENST00000626422 TDRD9Q8NDG6 1382 aaKnown RBP23.23■■□□□ 1.31
MECP2-215ENST00000626422 SOGA1O94964 1423 aa23.22■■□□□ 1.31
MECP2-215ENST00000626422 TRHP20396 242 aaPredicted RBP23.18■■□□□ 1.3
MECP2-215ENST00000626422 FGD5Q6ZNL6 1462 aa23.16■■□□□ 1.3
MECP2-215ENST00000626422 SNAPC4Q5SXM2 1469 aa23.15■■□□□ 1.3
MECP2-215ENST00000626422 CUX1P39880 1505 aa23.12■■□□□ 1.29
MECP2-215ENST00000626422 CLASP1Q7Z460 1538 aa23.12■■□□□ 1.29
MECP2-215ENST00000626422 WDR97A6NE52 1622 aa23.08■■□□□ 1.28
MECP2-215ENST00000626422 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
MECP2-215ENST00000626422 SYNJ1O43426 1573 aa23.03■■□□□ 1.28
MECP2-215ENST00000626422 MAGI1Q96QZ7 1491 aaPredicted RBP23.03■■□□□ 1.28
MECP2-215ENST00000626422 GRIN2BQ13224 1484 aa23.02■■□□□ 1.28
MECP2-215ENST00000626422 PBRM1Q86U86 1689 aa22.99■■□□□ 1.27
MECP2-215ENST00000626422 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
MECP2-215ENST00000626422 GAPVD1Q14C86 1478 aa22.92■■□□□ 1.26
MECP2-215ENST00000626422 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
MECP2-215ENST00000626422 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
MECP2-215ENST00000626422 ERCC6L2Q5T890 1561 aa22.81■■□□□ 1.24
MECP2-215ENST00000626422 GRIN2AQ12879 1464 aa22.74■■□□□ 1.23
MECP2-215ENST00000626422 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
MECP2-215ENST00000626422 SUPT5HO00267 1087 aaKnown RBP22.72■■□□□ 1.23
MECP2-215ENST00000626422 ADAMTS12P58397 1594 aa22.71■■□□□ 1.23
MECP2-215ENST00000626422 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
MECP2-215ENST00000626422 WRNQ14191 1432 aaPredicted RBP eCLIP22.67■■□□□ 1.22
MECP2-215ENST00000626422 NUP160Q12769 1436 aa22.66■■□□□ 1.22
MECP2-215ENST00000626422 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
MECP2-215ENST00000626422 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
MECP2-215ENST00000626422 SHROOM2Q13796 1616 aa22.64■■□□□ 1.22
MECP2-215ENST00000626422 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
MECP2-215ENST00000626422 KIF13AQ9H1H9 1805 aa22.54■■□□□ 1.2
MECP2-215ENST00000626422 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
MECP2-215ENST00000626422 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
MECP2-215ENST00000626422 JPH4Q96JJ6 628 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms