RNA–Protein interactions for RNA: ENST00000626313.1

KCNQ2-210, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 5

Gene KCNQ2, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-210ENST00000626313 NISCHQ9Y2I1 1504 aa43.62■■■■■ 4.57
KCNQ2-210ENST00000626313 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
KCNQ2-210ENST00000626313 ABCC9O60706 1549 aa38.2■■■■□ 3.71
KCNQ2-210ENST00000626313 RB1CC1Q8TDY2 1594 aa36.64■■■■□ 3.46
KCNQ2-210ENST00000626313 DCAF8L2P0C7V8 631 aa36.57■■■■□ 3.44
KCNQ2-210ENST00000626313 NACADO15069 1562 aa36.54■■■■□ 3.44
KCNQ2-210ENST00000626313 ZCCHC6Q5VYS8 1495 aaKnown RBP36.32■■■■□ 3.41
KCNQ2-210ENST00000626313 MYO15BQ96JP2 1530 aa36.23■■■■□ 3.39
KCNQ2-210ENST00000626313 DCAF1Q9Y4B6 1507 aa36.03■■■■□ 3.36
KCNQ2-210ENST00000626313 UNC13AQ9UPW8 1703 aa35.81■■■■□ 3.32
KCNQ2-210ENST00000626313 PABPN1Q86U42 306 aaKnown RBP eCLIP35.66■■■■□ 3.3
KCNQ2-210ENST00000626313 BICRAQ9NZM4 1560 aa35.52■■■■□ 3.28
KCNQ2-210ENST00000626313 SCRIBQ14160 1630 aa35.51■■■■□ 3.28
KCNQ2-210ENST00000626313 DNAJC5BQ9UF47 199 aa35.12■■■■□ 3.21
KCNQ2-210ENST00000626313 SHROOM4Q9ULL8 1493 aa35.11■■■■□ 3.21
KCNQ2-210ENST00000626313 EIF4G1Q04637 1599 aaKnown RBP34.62■■■■□ 3.13
KCNQ2-210ENST00000626313 CC2D2AQ9P2K1 1620 aa34.52■■■■□ 3.12
KCNQ2-210ENST00000626313 CECR2Q9BXF3 1484 aa34.32■■■■□ 3.08
KCNQ2-210ENST00000626313 SMARCA4P51532 1647 aa33.9■■■■□ 3.02
KCNQ2-210ENST00000626313 BAZ1AQ9NRL2 1556 aaPredicted RBP33.83■■■■□ 3.01
KCNQ2-210ENST00000626313 ATAD2BQ9ULI0 1458 aa33.73■■■□□ 2.99
KCNQ2-210ENST00000626313 NCAPD3P42695 1498 aa33.69■■■□□ 2.98
KCNQ2-210ENST00000626313 SMARCA2P51531 1590 aa33.69■■■□□ 2.98
KCNQ2-210ENST00000626313 MROH2BQ7Z745 1585 aa33.64■■■□□ 2.98
KCNQ2-210ENST00000626313 HMGXB3Q12766 1538 aa33.56■■■□□ 2.96
KCNQ2-210ENST00000626313 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.96
KCNQ2-210ENST00000626313 BAZ1BQ9UIG0 1483 aaKnown RBP33.49■■■□□ 2.95
KCNQ2-210ENST00000626313 WIZO95785 1651 aa33.28■■■□□ 2.92
KCNQ2-210ENST00000626313 RSF1Q96T23 1441 aaPredicted RBP33.18■■■□□ 2.9
KCNQ2-210ENST00000626313 NESP48681 1621 aa33■■■□□ 2.87
KCNQ2-210ENST00000626313 ERCC6Q03468 1493 aa32.96■■■□□ 2.87
KCNQ2-210ENST00000626313 TOP2AP11388 1531 aaKnown RBP32.91■■■□□ 2.86
KCNQ2-210ENST00000626313 LAMC3Q9Y6N6 1575 aa32.87■■■□□ 2.85
KCNQ2-210ENST00000626313 CADPSQ9ULU8 1353 aa32.73■■■□□ 2.83
KCNQ2-210ENST00000626313 PDS5BQ9NTI5 1447 aa32.65■■■□□ 2.82
KCNQ2-210ENST00000626313 KIF21AQ7Z4S6 1674 aa32.62■■■□□ 2.81
KCNQ2-210ENST00000626313 CUX2O14529 1486 aa32.59■■■□□ 2.81
KCNQ2-210ENST00000626313 THOC2Q8NI27 1593 aaKnown RBP32.53■■■□□ 2.8
KCNQ2-210ENST00000626313 CCDC88BA6NC98 1476 aa32.5■■■□□ 2.79
KCNQ2-210ENST00000626313 CFTRP13569 1480 aa32.5■■■□□ 2.79
KCNQ2-210ENST00000626313 FANCD2Q9BXW9 1451 aa32.4■■■□□ 2.78
KCNQ2-210ENST00000626313 CEP164Q9UPV0 1460 aa32.38■■■□□ 2.77
KCNQ2-210ENST00000626313 MRC2Q9UBG0 1479 aa32.35■■■□□ 2.77
KCNQ2-210ENST00000626313 SUPT5HO00267 1087 aaKnown RBP32.31■■■□□ 2.76
KCNQ2-210ENST00000626313 PRDM2Q13029 1718 aa32.28■■■□□ 2.76
KCNQ2-210ENST00000626313 WDR62O43379 1518 aa32.23■■■□□ 2.75
KCNQ2-210ENST00000626313 URB2Q14146 1524 aaKnown RBP32.07■■■□□ 2.72
KCNQ2-210ENST00000626313 TOPBP1Q92547 1522 aa31.85■■■□□ 2.69
KCNQ2-210ENST00000626313 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
KCNQ2-210ENST00000626313 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
KCNQ2-210ENST00000626313 DNAJC5Q9H3Z4 198 aa31.71■■■□□ 2.67
KCNQ2-210ENST00000626313 IFT140Q96RY7 1462 aa31.68■■■□□ 2.66
KCNQ2-210ENST00000626313 POLA1P09884 1462 aaPredicted RBP31.58■■■□□ 2.65
KCNQ2-210ENST00000626313 CUX1P39880 1505 aa31.57■■■□□ 2.64
KCNQ2-210ENST00000626313 ZNF608Q9ULD9 1512 aaPredicted RBP31.57■■■□□ 2.64
KCNQ2-210ENST00000626313 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
KCNQ2-210ENST00000626313 FGD5Q6ZNL6 1462 aa31.5■■■□□ 2.63
KCNQ2-210ENST00000626313 EIF4G3O43432 1585 aaKnown RBP31.46■■■□□ 2.63
KCNQ2-210ENST00000626313 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
KCNQ2-210ENST00000626313 SOGA1O94964 1423 aa31.43■■■□□ 2.62
KCNQ2-210ENST00000626313 AQRO60306 1485 aaKnown RBP eCLIP31.37■■■□□ 2.61
KCNQ2-210ENST00000626313 WRNQ14191 1432 aaPredicted RBP eCLIP31.32■■■□□ 2.6
KCNQ2-210ENST00000626313 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
KCNQ2-210ENST00000626313 SYNJ1O43426 1573 aa31.26■■■□□ 2.59
KCNQ2-210ENST00000626313 TOP2BQ02880 1626 aa31.24■■■□□ 2.59
KCNQ2-210ENST00000626313 BIVM-ERCC5R4GMW8 1640 aa31.24■■■□□ 2.59
KCNQ2-210ENST00000626313 WDR97A6NE52 1622 aa31.23■■■□□ 2.59
KCNQ2-210ENST00000626313 OSCARQ8IYS5 282 aa31.2■■■□□ 2.59
KCNQ2-210ENST00000626313 ABCA10Q8WWZ4 1543 aa31.15■■■□□ 2.58
KCNQ2-210ENST00000626313 SNAPC4Q5SXM2 1469 aa31.1■■■□□ 2.57
KCNQ2-210ENST00000626313 GRIN2BQ13224 1484 aa31.09■■■□□ 2.57
KCNQ2-210ENST00000626313 CHD1O14646 1710 aa31.09■■■□□ 2.57
KCNQ2-210ENST00000626313 GAPVD1Q14C86 1478 aa31.08■■■□□ 2.57
KCNQ2-210ENST00000626313 FBLN2P98095 1184 aa31.07■■■□□ 2.56
KCNQ2-210ENST00000626313 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
KCNQ2-210ENST00000626313 PBRM1Q86U86 1689 aa31.05■■■□□ 2.56
KCNQ2-210ENST00000626313 MAGI1Q96QZ7 1491 aaPredicted RBP31.02■■■□□ 2.56
KCNQ2-210ENST00000626313 CHMP7Q8WUX9 453 aaPredicted RBP30.91■■■□□ 2.54
KCNQ2-210ENST00000626313 SYNJ2O15056 1496 aa30.9■■■□□ 2.54
KCNQ2-210ENST00000626313 ADAMTS12P58397 1594 aa30.79■■■□□ 2.52
KCNQ2-210ENST00000626313 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
KCNQ2-210ENST00000626313 RIMBP3CA6NJZ7 1639 aa30.76■■■□□ 2.52
KCNQ2-210ENST00000626313 RIMBP3BA6NNM3 1639 aa30.76■■■□□ 2.52
KCNQ2-210ENST00000626313 RIMBP3Q9UFD9 1639 aa30.76■■■□□ 2.52
KCNQ2-210ENST00000626313 ARHGEF11O15085 1522 aa30.74■■■□□ 2.51
KCNQ2-210ENST00000626313 TRIM41Q8WV44 630 aa30.73■■■□□ 2.51
KCNQ2-210ENST00000626313 CLASP1Q7Z460 1538 aa30.72■■■□□ 2.51
KCNQ2-210ENST00000626313 FHAD1B1AJZ9 1412 aa30.71■■■□□ 2.51
KCNQ2-210ENST00000626313 GRIN2AQ12879 1464 aa30.7■■■□□ 2.5
KCNQ2-210ENST00000626313 KIF27Q86VH2 1401 aa30.67■■■□□ 2.5
KCNQ2-210ENST00000626313 CEP170Q5SW79 1584 aa30.56■■■□□ 2.48
KCNQ2-210ENST00000626313 NUP160Q12769 1436 aa30.55■■■□□ 2.48
KCNQ2-210ENST00000626313 IGF1RP08069 1367 aa30.52■■■□□ 2.48
KCNQ2-210ENST00000626313 CUL7Q14999 1698 aa30.49■■■□□ 2.47
KCNQ2-210ENST00000626313 ARAP1Q96P48 1450 aa30.49■■■□□ 2.47
KCNQ2-210ENST00000626313 CYB5RLQ6IPT4 315 aa30.46■■■□□ 2.47
KCNQ2-210ENST00000626313 CARMIL1Q5VZK9 1371 aa30.37■■■□□ 2.45
KCNQ2-210ENST00000626313 RUSC2Q8N2Y8 1516 aa30.35■■■□□ 2.45
KCNQ2-210ENST00000626313 SHROOM2Q13796 1616 aa30.33■■■□□ 2.45
KCNQ2-210ENST00000626313 ERCC6L2Q5T890 1561 aa30.31■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms