RNA–Protein interactions for RNA: ENST00000626188.1

CHRNA4-208, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 441 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-208ENST00000626188 NISCHQ9Y2I1 1504 aa39.31■■■■□ 3.88
CHRNA4-208ENST00000626188 ABCC9O60706 1549 aa36.24■■■■□ 3.39
CHRNA4-208ENST00000626188 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
CHRNA4-208ENST00000626188 DNAJC5BQ9UF47 199 aa34.52■■■■□ 3.12
CHRNA4-208ENST00000626188 RB1CC1Q8TDY2 1594 aa34.18■■■■□ 3.06
CHRNA4-208ENST00000626188 NACADO15069 1562 aa33.77■■■■□ 3
CHRNA4-208ENST00000626188 PABPN1Q86U42 306 aaKnown RBP eCLIP33.67■■■□□ 2.98
CHRNA4-208ENST00000626188 DCAF8L2P0C7V8 631 aa33.64■■■□□ 2.98
CHRNA4-208ENST00000626188 UNC13AQ9UPW8 1703 aa33.31■■■□□ 2.92
CHRNA4-208ENST00000626188 BICRAQ9NZM4 1560 aa33.14■■■□□ 2.9
CHRNA4-208ENST00000626188 MYO15BQ96JP2 1530 aa33.04■■■□□ 2.88
CHRNA4-208ENST00000626188 CECR2Q9BXF3 1484 aa32.71■■■□□ 2.83
CHRNA4-208ENST00000626188 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
CHRNA4-208ENST00000626188 CC2D2AQ9P2K1 1620 aa32.66■■■□□ 2.82
CHRNA4-208ENST00000626188 ZCCHC6Q5VYS8 1495 aaKnown RBP32.43■■■□□ 2.78
CHRNA4-208ENST00000626188 EIF4G1Q04637 1599 aaKnown RBP32.43■■■□□ 2.78
CHRNA4-208ENST00000626188 DCAF1Q9Y4B6 1507 aa32.4■■■□□ 2.78
CHRNA4-208ENST00000626188 SCRIBQ14160 1630 aa32.4■■■□□ 2.78
CHRNA4-208ENST00000626188 DNAJC5Q9H3Z4 198 aa32.2■■■□□ 2.75
CHRNA4-208ENST00000626188 CUX2O14529 1486 aa31.47■■■□□ 2.63
CHRNA4-208ENST00000626188 ERCC6Q03468 1493 aa31.39■■■□□ 2.62
CHRNA4-208ENST00000626188 NCAPD3P42695 1498 aa31.18■■■□□ 2.58
CHRNA4-208ENST00000626188 ATAD2BQ9ULI0 1458 aa31.01■■■□□ 2.55
CHRNA4-208ENST00000626188 NESP48681 1621 aa30.92■■■□□ 2.54
CHRNA4-208ENST00000626188 SMARCA2P51531 1590 aa30.89■■■□□ 2.54
CHRNA4-208ENST00000626188 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
CHRNA4-208ENST00000626188 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
CHRNA4-208ENST00000626188 BAZ1BQ9UIG0 1483 aaKnown RBP30.71■■■□□ 2.51
CHRNA4-208ENST00000626188 THOC2Q8NI27 1593 aaKnown RBP30.69■■■□□ 2.5
CHRNA4-208ENST00000626188 TRIM41Q8WV44 630 aa30.63■■■□□ 2.49
CHRNA4-208ENST00000626188 LAMC3Q9Y6N6 1575 aa30.59■■■□□ 2.49
CHRNA4-208ENST00000626188 BAZ1AQ9NRL2 1556 aaPredicted RBP30.58■■■□□ 2.49
CHRNA4-208ENST00000626188 PDS5BQ9NTI5 1447 aa30.48■■■□□ 2.47
CHRNA4-208ENST00000626188 KIF21AQ7Z4S6 1674 aa30.46■■■□□ 2.47
CHRNA4-208ENST00000626188 PEG3Q9GZU2 1588 aa30.46■■■□□ 2.47
CHRNA4-208ENST00000626188 MROH2BQ7Z745 1585 aa30.29■■■□□ 2.44
CHRNA4-208ENST00000626188 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
CHRNA4-208ENST00000626188 MRC2Q9UBG0 1479 aa30.24■■■□□ 2.43
CHRNA4-208ENST00000626188 WDR62O43379 1518 aa30.15■■■□□ 2.42
CHRNA4-208ENST00000626188 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
CHRNA4-208ENST00000626188 OSCARQ8IYS5 282 aa29.99■■■□□ 2.39
CHRNA4-208ENST00000626188 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
CHRNA4-208ENST00000626188 WIZO95785 1651 aa29.89■■■□□ 2.38
CHRNA4-208ENST00000626188 CFTRP13569 1480 aa29.74■■■□□ 2.35
CHRNA4-208ENST00000626188 URB2Q14146 1524 aaKnown RBP29.66■■■□□ 2.34
CHRNA4-208ENST00000626188 RIMBP3CA6NJZ7 1639 aa29.6■■■□□ 2.33
CHRNA4-208ENST00000626188 RIMBP3BA6NNM3 1639 aa29.6■■■□□ 2.33
CHRNA4-208ENST00000626188 RIMBP3Q9UFD9 1639 aa29.6■■■□□ 2.33
CHRNA4-208ENST00000626188 TOP2AP11388 1531 aaKnown RBP29.47■■■□□ 2.31
CHRNA4-208ENST00000626188 ARHGEF11O15085 1522 aa29.45■■■□□ 2.31
CHRNA4-208ENST00000626188 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
CHRNA4-208ENST00000626188 ZNF608Q9ULD9 1512 aaPredicted RBP29.42■■■□□ 2.3
CHRNA4-208ENST00000626188 IFT140Q96RY7 1462 aa29.42■■■□□ 2.3
CHRNA4-208ENST00000626188 CYB5RLQ6IPT4 315 aa29.35■■■□□ 2.29
CHRNA4-208ENST00000626188 PRDM2Q13029 1718 aa29.32■■■□□ 2.28
CHRNA4-208ENST00000626188 TRHP20396 242 aaPredicted RBP29.29■■■□□ 2.28
CHRNA4-208ENST00000626188 TOPBP1Q92547 1522 aa29.25■■■□□ 2.27
CHRNA4-208ENST00000626188 EIF4G3O43432 1585 aaKnown RBP29.22■■■□□ 2.27
CHRNA4-208ENST00000626188 CCDC88BA6NC98 1476 aa29.16■■■□□ 2.26
CHRNA4-208ENST00000626188 ABCC8Q09428 1581 aa29.15■■■□□ 2.26
CHRNA4-208ENST00000626188 FBLN2P98095 1184 aa29.14■■■□□ 2.26
CHRNA4-208ENST00000626188 ARAP1Q96P48 1450 aa29.11■■■□□ 2.25
CHRNA4-208ENST00000626188 CHD1O14646 1710 aa29.1■■■□□ 2.25
CHRNA4-208ENST00000626188 AQRO60306 1485 aaKnown RBP eCLIP29.1■■■□□ 2.25
CHRNA4-208ENST00000626188 DNMBPQ6XZF7 1577 aa29.08■■■□□ 2.25
CHRNA4-208ENST00000626188 TARBP1Q13395 1621 aaKnown RBP29■■■□□ 2.23
CHRNA4-208ENST00000626188 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
CHRNA4-208ENST00000626188 POLA1P09884 1462 aaPredicted RBP28.91■■■□□ 2.22
CHRNA4-208ENST00000626188 TDRD9Q8NDG6 1382 aaKnown RBP28.84■■■□□ 2.21
CHRNA4-208ENST00000626188 RAD54L2Q9Y4B4 1467 aa28.83■■■□□ 2.21
CHRNA4-208ENST00000626188 SOGA1O94964 1423 aa28.8■■■□□ 2.2
CHRNA4-208ENST00000626188 CHMP7Q8WUX9 453 aaPredicted RBP28.78■■■□□ 2.2
CHRNA4-208ENST00000626188 SNAPC4Q5SXM2 1469 aa28.78■■■□□ 2.2
CHRNA4-208ENST00000626188 CLASP1Q7Z460 1538 aa28.75■■■□□ 2.19
CHRNA4-208ENST00000626188 SYNJ1O43426 1573 aa28.72■■■□□ 2.19
CHRNA4-208ENST00000626188 WDR97A6NE52 1622 aa28.66■■■□□ 2.18
CHRNA4-208ENST00000626188 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
CHRNA4-208ENST00000626188 FGD5Q6ZNL6 1462 aa28.65■■■□□ 2.18
CHRNA4-208ENST00000626188 GRIN2BQ13224 1484 aa28.61■■■□□ 2.17
CHRNA4-208ENST00000626188 SYNJ2O15056 1496 aa28.59■■■□□ 2.17
CHRNA4-208ENST00000626188 GAPVD1Q14C86 1478 aa28.55■■■□□ 2.16
CHRNA4-208ENST00000626188 CUX1P39880 1505 aa28.49■■■□□ 2.15
CHRNA4-208ENST00000626188 PBRM1Q86U86 1689 aa28.41■■■□□ 2.14
CHRNA4-208ENST00000626188 ERCC6L2Q5T890 1561 aa28.27■■■□□ 2.12
CHRNA4-208ENST00000626188 ABCA10Q8WWZ4 1543 aa28.26■■■□□ 2.11
CHRNA4-208ENST00000626188 ABCA5Q8WWZ7 1642 aa28.25■■■□□ 2.11
CHRNA4-208ENST00000626188 GRIN2AQ12879 1464 aa28.23■■■□□ 2.11
CHRNA4-208ENST00000626188 CEP170Q5SW79 1584 aa28.19■■■□□ 2.1
CHRNA4-208ENST00000626188 NUP160Q12769 1436 aa28.14■■■□□ 2.1
CHRNA4-208ENST00000626188 ADAMTS12P58397 1594 aa28.11■■■□□ 2.09
CHRNA4-208ENST00000626188 WRNQ14191 1432 aaPredicted RBP eCLIP28.08■■■□□ 2.09
CHRNA4-208ENST00000626188 SHROOM2Q13796 1616 aa28.05■■■□□ 2.08
CHRNA4-208ENST00000626188 FHAD1B1AJZ9 1412 aa28.04■■■□□ 2.08
CHRNA4-208ENST00000626188 KIF13AQ9H1H9 1805 aa28.03■■■□□ 2.08
CHRNA4-208ENST00000626188 PRG4Q92954 1404 aaPredicted RBP27.98■■■□□ 2.07
CHRNA4-208ENST00000626188 FAM69CQ0P6D2 419 aa27.94■■■□□ 2.06
CHRNA4-208ENST00000626188 NPM1P06748 294 aaKnown RBP eCLIP27.92■■■□□ 2.06
CHRNA4-208ENST00000626188 JPH4Q96JJ6 628 aa27.91■■■□□ 2.06
CHRNA4-208ENST00000626188 ERICH3Q5RHP9 1530 aa27.9■■■□□ 2.06
CHRNA4-208ENST00000626188 ABCC10Q5T3U5 1492 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms