RNA–Protein interactions for RNA: ENST00000625879.2

LINC02028-224, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 421 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-224ENST00000625879 NISCHQ9Y2I1 1504 aa34.64■■■■□ 3.14
LINC02028-224ENST00000625879 ABCC9O60706 1549 aa31.7■■■□□ 2.66
LINC02028-224ENST00000625879 CCDC180Q9P1Z9 1646 aa31.37■■■□□ 2.61
LINC02028-224ENST00000625879 DNAJC5BQ9UF47 199 aa30.12■■■□□ 2.41
LINC02028-224ENST00000625879 RB1CC1Q8TDY2 1594 aa30.07■■■□□ 2.4
LINC02028-224ENST00000625879 NACADO15069 1562 aa29.76■■■□□ 2.35
LINC02028-224ENST00000625879 PABPN1Q86U42 306 aaKnown RBP eCLIP29.37■■■□□ 2.29
LINC02028-224ENST00000625879 UNC13AQ9UPW8 1703 aa29.33■■■□□ 2.29
LINC02028-224ENST00000625879 DCAF8L2P0C7V8 631 aa29.27■■■□□ 2.28
LINC02028-224ENST00000625879 MYO15BQ96JP2 1530 aa29.25■■■□□ 2.27
LINC02028-224ENST00000625879 BICRAQ9NZM4 1560 aa29.17■■■□□ 2.26
LINC02028-224ENST00000625879 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
LINC02028-224ENST00000625879 DCAF1Q9Y4B6 1507 aa28.67■■■□□ 2.18
LINC02028-224ENST00000625879 CC2D2AQ9P2K1 1620 aa28.66■■■□□ 2.18
LINC02028-224ENST00000625879 CECR2Q9BXF3 1484 aa28.66■■■□□ 2.18
LINC02028-224ENST00000625879 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
LINC02028-224ENST00000625879 EIF4G1Q04637 1599 aaKnown RBP28.51■■■□□ 2.15
LINC02028-224ENST00000625879 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
LINC02028-224ENST00000625879 DNAJC5Q9H3Z4 198 aa28.12■■■□□ 2.09
LINC02028-224ENST00000625879 CUX2O14529 1486 aa27.65■■■□□ 2.02
LINC02028-224ENST00000625879 NCAPD3P42695 1498 aa27.46■■□□□ 1.99
LINC02028-224ENST00000625879 ERCC6Q03468 1493 aa27.45■■□□□ 1.99
LINC02028-224ENST00000625879 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
LINC02028-224ENST00000625879 HMGXB3Q12766 1538 aa27.24■■□□□ 1.95
LINC02028-224ENST00000625879 SMARCA2P51531 1590 aa27.22■■□□□ 1.95
LINC02028-224ENST00000625879 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
LINC02028-224ENST00000625879 NESP48681 1621 aa27.08■■□□□ 1.93
LINC02028-224ENST00000625879 THOC2Q8NI27 1593 aaKnown RBP26.99■■□□□ 1.91
LINC02028-224ENST00000625879 BAZ1BQ9UIG0 1483 aaKnown RBP26.99■■□□□ 1.91
LINC02028-224ENST00000625879 BAZ1AQ9NRL2 1556 aaPredicted RBP26.95■■□□□ 1.9
LINC02028-224ENST00000625879 LAMC3Q9Y6N6 1575 aa26.94■■□□□ 1.9
LINC02028-224ENST00000625879 PEG3Q9GZU2 1588 aa26.93■■□□□ 1.9
LINC02028-224ENST00000625879 PDS5BQ9NTI5 1447 aa26.78■■□□□ 1.88
LINC02028-224ENST00000625879 KIF21AQ7Z4S6 1674 aa26.76■■□□□ 1.87
LINC02028-224ENST00000625879 MROH2BQ7Z745 1585 aa26.63■■□□□ 1.85
LINC02028-224ENST00000625879 TRIM41Q8WV44 630 aa26.57■■□□□ 1.84
LINC02028-224ENST00000625879 CADPSQ9ULU8 1353 aa26.57■■□□□ 1.84
LINC02028-224ENST00000625879 MRC2Q9UBG0 1479 aa26.56■■□□□ 1.84
LINC02028-224ENST00000625879 WDR62O43379 1518 aa26.54■■□□□ 1.84
LINC02028-224ENST00000625879 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
LINC02028-224ENST00000625879 WIZO95785 1651 aa26.27■■□□□ 1.8
LINC02028-224ENST00000625879 FANCD2Q9BXW9 1451 aa26.26■■□□□ 1.79
LINC02028-224ENST00000625879 OSCARQ8IYS5 282 aa26.22■■□□□ 1.79
LINC02028-224ENST00000625879 CFTRP13569 1480 aa26.19■■□□□ 1.78
LINC02028-224ENST00000625879 URB2Q14146 1524 aaKnown RBP26.06■■□□□ 1.76
LINC02028-224ENST00000625879 TOP2AP11388 1531 aaKnown RBP25.98■■□□□ 1.75
LINC02028-224ENST00000625879 RIMBP3CA6NJZ7 1639 aa25.94■■□□□ 1.74
LINC02028-224ENST00000625879 RIMBP3BA6NNM3 1639 aa25.94■■□□□ 1.74
LINC02028-224ENST00000625879 RIMBP3Q9UFD9 1639 aa25.94■■□□□ 1.74
LINC02028-224ENST00000625879 RSF1Q96T23 1441 aaPredicted RBP25.91■■□□□ 1.74
LINC02028-224ENST00000625879 PRDM2Q13029 1718 aa25.91■■□□□ 1.74
LINC02028-224ENST00000625879 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
LINC02028-224ENST00000625879 ARHGEF11O15085 1522 aa25.83■■□□□ 1.72
LINC02028-224ENST00000625879 ZNF608Q9ULD9 1512 aaPredicted RBP25.79■■□□□ 1.72
LINC02028-224ENST00000625879 TOPBP1Q92547 1522 aa25.71■■□□□ 1.71
LINC02028-224ENST00000625879 ABCC8Q09428 1581 aa25.69■■□□□ 1.7
LINC02028-224ENST00000625879 EIF4G3O43432 1585 aaKnown RBP25.68■■□□□ 1.7
LINC02028-224ENST00000625879 CCDC88BA6NC98 1476 aa25.63■■□□□ 1.69
LINC02028-224ENST00000625879 DNMBPQ6XZF7 1577 aa25.6■■□□□ 1.69
LINC02028-224ENST00000625879 CYB5RLQ6IPT4 315 aa25.58■■□□□ 1.69
LINC02028-224ENST00000625879 CHD1O14646 1710 aa25.56■■□□□ 1.68
LINC02028-224ENST00000625879 TARBP1Q13395 1621 aaKnown RBP25.53■■□□□ 1.68
LINC02028-224ENST00000625879 ARAP1Q96P48 1450 aa25.53■■□□□ 1.68
LINC02028-224ENST00000625879 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.67
LINC02028-224ENST00000625879 TRHP20396 242 aaPredicted RBP25.45■■□□□ 1.66
LINC02028-224ENST00000625879 POLA1P09884 1462 aaPredicted RBP25.41■■□□□ 1.66
LINC02028-224ENST00000625879 FBLN2P98095 1184 aa25.37■■□□□ 1.65
LINC02028-224ENST00000625879 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
LINC02028-224ENST00000625879 CLASP1Q7Z460 1538 aa25.29■■□□□ 1.64
LINC02028-224ENST00000625879 SOGA1O94964 1423 aa25.27■■□□□ 1.64
LINC02028-224ENST00000625879 RAD54L2Q9Y4B4 1467 aa25.26■■□□□ 1.63
LINC02028-224ENST00000625879 SNAPC4Q5SXM2 1469 aa25.25■■□□□ 1.63
LINC02028-224ENST00000625879 SYNJ1O43426 1573 aa25.24■■□□□ 1.63
LINC02028-224ENST00000625879 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
LINC02028-224ENST00000625879 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
LINC02028-224ENST00000625879 FGD5Q6ZNL6 1462 aa25.17■■□□□ 1.62
LINC02028-224ENST00000625879 CHMP7Q8WUX9 453 aaPredicted RBP25.17■■□□□ 1.62
LINC02028-224ENST00000625879 GRIN2BQ13224 1484 aa25.15■■□□□ 1.62
LINC02028-224ENST00000625879 SYNJ2O15056 1496 aa25.14■■□□□ 1.61
LINC02028-224ENST00000625879 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
LINC02028-224ENST00000625879 CUX1P39880 1505 aa25.07■■□□□ 1.6
LINC02028-224ENST00000625879 GAPVD1Q14C86 1478 aa25.03■■□□□ 1.6
LINC02028-224ENST00000625879 PBRM1Q86U86 1689 aa25■■□□□ 1.59
LINC02028-224ENST00000625879 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
LINC02028-224ENST00000625879 ABCA10Q8WWZ4 1543 aa24.9■■□□□ 1.58
LINC02028-224ENST00000625879 GRIN2AQ12879 1464 aa24.82■■□□□ 1.56
LINC02028-224ENST00000625879 NUP160Q12769 1436 aa24.78■■□□□ 1.56
LINC02028-224ENST00000625879 ERCC6L2Q5T890 1561 aa24.77■■□□□ 1.56
LINC02028-224ENST00000625879 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
LINC02028-224ENST00000625879 ADAMTS12P58397 1594 aa24.75■■□□□ 1.55
LINC02028-224ENST00000625879 SHROOM2Q13796 1616 aa24.73■■□□□ 1.55
LINC02028-224ENST00000625879 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
LINC02028-224ENST00000625879 FHAD1B1AJZ9 1412 aa24.66■■□□□ 1.54
LINC02028-224ENST00000625879 KIF13AQ9H1H9 1805 aa24.63■■□□□ 1.53
LINC02028-224ENST00000625879 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
LINC02028-224ENST00000625879 BIVM-ERCC5R4GMW8 1640 aa24.58■■□□□ 1.53
LINC02028-224ENST00000625879 TOP2BQ02880 1626 aa24.57■■□□□ 1.52
LINC02028-224ENST00000625879 PRG4Q92954 1404 aaPredicted RBP24.52■■□□□ 1.52
LINC02028-224ENST00000625879 ABCC10Q5T3U5 1492 aa24.47■■□□□ 1.51
LINC02028-224ENST00000625879 MAPKBP1O60336 1514 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms