RNA–Protein interactions for RNA: ENST00000625249.1

PNPT1-207, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

TSL 5 BASIC

Gene PNPT1, Length 216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-207ENST00000625249 NISCHQ9Y2I1 1504 aa32.89■■■□□ 2.86
PNPT1-207ENST00000625249 CCDC180Q9P1Z9 1646 aa29.53■■■□□ 2.32
PNPT1-207ENST00000625249 ABCC9O60706 1549 aa29.24■■■□□ 2.27
PNPT1-207ENST00000625249 RB1CC1Q8TDY2 1594 aa27.93■■■□□ 2.06
PNPT1-207ENST00000625249 NACADO15069 1562 aa27.77■■■□□ 2.04
PNPT1-207ENST00000625249 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
PNPT1-207ENST00000625249 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
PNPT1-207ENST00000625249 DCAF8L2P0C7V8 631 aa27.44■■□□□ 1.98
PNPT1-207ENST00000625249 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
PNPT1-207ENST00000625249 DNAJC5BQ9UF47 199 aa27.26■■□□□ 1.95
PNPT1-207ENST00000625249 BICRAQ9NZM4 1560 aa27.22■■□□□ 1.95
PNPT1-207ENST00000625249 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.94
PNPT1-207ENST00000625249 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
PNPT1-207ENST00000625249 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
PNPT1-207ENST00000625249 SHROOM4Q9ULL8 1493 aa26.76■■□□□ 1.87
PNPT1-207ENST00000625249 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
PNPT1-207ENST00000625249 EIF4G1Q04637 1599 aaKnown RBP26.47■■□□□ 1.83
PNPT1-207ENST00000625249 CECR2Q9BXF3 1484 aa26.3■■□□□ 1.8
PNPT1-207ENST00000625249 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
PNPT1-207ENST00000625249 NCAPD3P42695 1498 aa25.62■■□□□ 1.69
PNPT1-207ENST00000625249 ATAD2BQ9ULI0 1458 aa25.58■■□□□ 1.69
PNPT1-207ENST00000625249 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
PNPT1-207ENST00000625249 HMGXB3Q12766 1538 aa25.51■■□□□ 1.67
PNPT1-207ENST00000625249 BAZ1AQ9NRL2 1556 aaPredicted RBP25.51■■□□□ 1.67
PNPT1-207ENST00000625249 PEG3Q9GZU2 1588 aa25.43■■□□□ 1.66
PNPT1-207ENST00000625249 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
PNPT1-207ENST00000625249 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
PNPT1-207ENST00000625249 NESP48681 1621 aa25.22■■□□□ 1.63
PNPT1-207ENST00000625249 ERCC6Q03468 1493 aa25.16■■□□□ 1.62
PNPT1-207ENST00000625249 CUX2O14529 1486 aa25.12■■□□□ 1.61
PNPT1-207ENST00000625249 WIZO95785 1651 aa25.11■■□□□ 1.61
PNPT1-207ENST00000625249 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
PNPT1-207ENST00000625249 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
PNPT1-207ENST00000625249 KIF21AQ7Z4S6 1674 aa24.99■■□□□ 1.59
PNPT1-207ENST00000625249 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
PNPT1-207ENST00000625249 DNAJC5Q9H3Z4 198 aa24.83■■□□□ 1.57
PNPT1-207ENST00000625249 CADPSQ9ULU8 1353 aa24.8■■□□□ 1.56
PNPT1-207ENST00000625249 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
PNPT1-207ENST00000625249 TOP2AP11388 1531 aaKnown RBP24.76■■□□□ 1.55
PNPT1-207ENST00000625249 WDR62O43379 1518 aa24.65■■□□□ 1.54
PNPT1-207ENST00000625249 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.54
PNPT1-207ENST00000625249 CFTRP13569 1480 aa24.62■■□□□ 1.53
PNPT1-207ENST00000625249 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.52
PNPT1-207ENST00000625249 FANCD2Q9BXW9 1451 aa24.56■■□□□ 1.52
PNPT1-207ENST00000625249 PRDM2Q13029 1718 aa24.55■■□□□ 1.52
PNPT1-207ENST00000625249 CCDC88BA6NC98 1476 aa24.44■■□□□ 1.5
PNPT1-207ENST00000625249 URB2Q14146 1524 aaKnown RBP24.4■■□□□ 1.5
PNPT1-207ENST00000625249 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
PNPT1-207ENST00000625249 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
PNPT1-207ENST00000625249 ZNF608Q9ULD9 1512 aaPredicted RBP24.06■■□□□ 1.44
PNPT1-207ENST00000625249 IFT140Q96RY7 1462 aa24.06■■□□□ 1.44
PNPT1-207ENST00000625249 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
PNPT1-207ENST00000625249 EIF4G3O43432 1585 aaKnown RBP24■■□□□ 1.43
PNPT1-207ENST00000625249 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
PNPT1-207ENST00000625249 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
PNPT1-207ENST00000625249 OSCARQ8IYS5 282 aa23.87■■□□□ 1.41
PNPT1-207ENST00000625249 CHD1O14646 1710 aa23.83■■□□□ 1.41
PNPT1-207ENST00000625249 CUX1P39880 1505 aa23.83■■□□□ 1.41
PNPT1-207ENST00000625249 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.4
PNPT1-207ENST00000625249 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
PNPT1-207ENST00000625249 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
PNPT1-207ENST00000625249 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
PNPT1-207ENST00000625249 WDR97A6NE52 1622 aa23.76■■□□□ 1.39
PNPT1-207ENST00000625249 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
PNPT1-207ENST00000625249 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
PNPT1-207ENST00000625249 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
PNPT1-207ENST00000625249 SUPT5HO00267 1087 aaKnown RBP23.73■■□□□ 1.39
PNPT1-207ENST00000625249 SOGA1O94964 1423 aa23.72■■□□□ 1.39
PNPT1-207ENST00000625249 TDRD9Q8NDG6 1382 aaKnown RBP23.66■■□□□ 1.38
PNPT1-207ENST00000625249 ARHGEF11O15085 1522 aa23.65■■□□□ 1.38
PNPT1-207ENST00000625249 SNAPC4Q5SXM2 1469 aa23.61■■□□□ 1.37
PNPT1-207ENST00000625249 PBRM1Q86U86 1689 aa23.6■■□□□ 1.37
PNPT1-207ENST00000625249 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
PNPT1-207ENST00000625249 BIVM-ERCC5R4GMW8 1640 aa23.55■■□□□ 1.36
PNPT1-207ENST00000625249 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
PNPT1-207ENST00000625249 MAGI1Q96QZ7 1491 aaPredicted RBP23.53■■□□□ 1.36
PNPT1-207ENST00000625249 CLASP1Q7Z460 1538 aa23.52■■□□□ 1.36
PNPT1-207ENST00000625249 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
PNPT1-207ENST00000625249 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
PNPT1-207ENST00000625249 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
PNPT1-207ENST00000625249 GAPVD1Q14C86 1478 aa23.48■■□□□ 1.35
PNPT1-207ENST00000625249 FBLN2P98095 1184 aa23.47■■□□□ 1.35
PNPT1-207ENST00000625249 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
PNPT1-207ENST00000625249 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
PNPT1-207ENST00000625249 WRNQ14191 1432 aaPredicted RBP eCLIP23.42■■□□□ 1.34
PNPT1-207ENST00000625249 ADAMTS12P58397 1594 aa23.35■■□□□ 1.33
PNPT1-207ENST00000625249 CHMP7Q8WUX9 453 aaPredicted RBP23.34■■□□□ 1.33
PNPT1-207ENST00000625249 CYB5RLQ6IPT4 315 aa23.31■■□□□ 1.32
PNPT1-207ENST00000625249 GRIN2AQ12879 1464 aa23.27■■□□□ 1.32
PNPT1-207ENST00000625249 CEP170Q5SW79 1584 aa23.25■■□□□ 1.31
PNPT1-207ENST00000625249 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
PNPT1-207ENST00000625249 NUP160Q12769 1436 aa23.19■■□□□ 1.3
PNPT1-207ENST00000625249 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
PNPT1-207ENST00000625249 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
PNPT1-207ENST00000625249 SHROOM2Q13796 1616 aa23.15■■□□□ 1.3
PNPT1-207ENST00000625249 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
PNPT1-207ENST00000625249 CUL7Q14999 1698 aa22.97■■□□□ 1.27
PNPT1-207ENST00000625249 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
PNPT1-207ENST00000625249 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
PNPT1-207ENST00000625249 IGF1RP08069 1367 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms