RNA–Protein interactions for RNA: ENST00000625115.1

CU633904.1-206, humanhuman

TSL 1 (best)

Gene CU633904.1, Length 888 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU633904.1-206ENST00000625115 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
CU633904.1-206ENST00000625115 ABCC9O60706 1549 aa28.81■■■□□ 2.2
CU633904.1-206ENST00000625115 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
CU633904.1-206ENST00000625115 DNAJC5BQ9UF47 199 aa27.39■■□□□ 1.98
CU633904.1-206ENST00000625115 RB1CC1Q8TDY2 1594 aa27.16■■□□□ 1.94
CU633904.1-206ENST00000625115 DCAF8L2P0C7V8 631 aa26.96■■□□□ 1.91
CU633904.1-206ENST00000625115 NACADO15069 1562 aa26.87■■□□□ 1.89
CU633904.1-206ENST00000625115 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
CU633904.1-206ENST00000625115 UNC13AQ9UPW8 1703 aa26.56■■□□□ 1.84
CU633904.1-206ENST00000625115 BICRAQ9NZM4 1560 aa26.39■■□□□ 1.82
CU633904.1-206ENST00000625115 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
CU633904.1-206ENST00000625115 CC2D2AQ9P2K1 1620 aa25.95■■□□□ 1.74
CU633904.1-206ENST00000625115 ZCCHC6Q5VYS8 1495 aaKnown RBP25.94■■□□□ 1.74
CU633904.1-206ENST00000625115 CECR2Q9BXF3 1484 aa25.94■■□□□ 1.74
CU633904.1-206ENST00000625115 SCRIBQ14160 1630 aa25.88■■□□□ 1.73
CU633904.1-206ENST00000625115 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
CU633904.1-206ENST00000625115 DCAF1Q9Y4B6 1507 aa25.85■■□□□ 1.73
CU633904.1-206ENST00000625115 EIF4G1Q04637 1599 aaKnown RBP25.78■■□□□ 1.72
CU633904.1-206ENST00000625115 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
CU633904.1-206ENST00000625115 ERCC6Q03468 1493 aa24.89■■□□□ 1.57
CU633904.1-206ENST00000625115 CUX2O14529 1486 aa24.86■■□□□ 1.57
CU633904.1-206ENST00000625115 NCAPD3P42695 1498 aa24.83■■□□□ 1.56
CU633904.1-206ENST00000625115 ATAD2BQ9ULI0 1458 aa24.73■■□□□ 1.55
CU633904.1-206ENST00000625115 NESP48681 1621 aa24.64■■□□□ 1.54
CU633904.1-206ENST00000625115 SMARCA2P51531 1590 aa24.61■■□□□ 1.53
CU633904.1-206ENST00000625115 SMARCA4P51532 1647 aa24.6■■□□□ 1.53
CU633904.1-206ENST00000625115 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
CU633904.1-206ENST00000625115 BAZ1BQ9UIG0 1483 aaKnown RBP24.49■■□□□ 1.51
CU633904.1-206ENST00000625115 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
CU633904.1-206ENST00000625115 THOC2Q8NI27 1593 aaKnown RBP24.35■■□□□ 1.49
CU633904.1-206ENST00000625115 LAMC3Q9Y6N6 1575 aa24.31■■□□□ 1.48
CU633904.1-206ENST00000625115 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
CU633904.1-206ENST00000625115 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
CU633904.1-206ENST00000625115 KIF21AQ7Z4S6 1674 aa24.26■■□□□ 1.47
CU633904.1-206ENST00000625115 PDS5BQ9NTI5 1447 aa24.23■■□□□ 1.47
CU633904.1-206ENST00000625115 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
CU633904.1-206ENST00000625115 CADPSQ9ULU8 1353 aa24.11■■□□□ 1.45
CU633904.1-206ENST00000625115 MRC2Q9UBG0 1479 aa24.03■■□□□ 1.44
CU633904.1-206ENST00000625115 WIZO95785 1651 aa23.97■■□□□ 1.43
CU633904.1-206ENST00000625115 WDR62O43379 1518 aa23.94■■□□□ 1.42
CU633904.1-206ENST00000625115 CEP164Q9UPV0 1460 aa23.87■■□□□ 1.41
CU633904.1-206ENST00000625115 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
CU633904.1-206ENST00000625115 OSCARQ8IYS5 282 aa23.8■■□□□ 1.4
CU633904.1-206ENST00000625115 CFTRP13569 1480 aa23.72■■□□□ 1.39
CU633904.1-206ENST00000625115 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
CU633904.1-206ENST00000625115 RSF1Q96T23 1441 aaPredicted RBP23.63■■□□□ 1.37
CU633904.1-206ENST00000625115 TOP2AP11388 1531 aaKnown RBP23.57■■□□□ 1.36
CU633904.1-206ENST00000625115 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
CU633904.1-206ENST00000625115 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
CU633904.1-206ENST00000625115 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
CU633904.1-206ENST00000625115 ZNF608Q9ULD9 1512 aaPredicted RBP23.45■■□□□ 1.34
CU633904.1-206ENST00000625115 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
CU633904.1-206ENST00000625115 IFT140Q96RY7 1462 aa23.39■■□□□ 1.34
CU633904.1-206ENST00000625115 CCDC88BA6NC98 1476 aa23.38■■□□□ 1.33
CU633904.1-206ENST00000625115 ARHGEF11O15085 1522 aa23.33■■□□□ 1.33
CU633904.1-206ENST00000625115 TOPBP1Q92547 1522 aa23.33■■□□□ 1.32
CU633904.1-206ENST00000625115 CYB5RLQ6IPT4 315 aa23.32■■□□□ 1.32
CU633904.1-206ENST00000625115 FBLN2P98095 1184 aa23.25■■□□□ 1.31
CU633904.1-206ENST00000625115 EIF4G3O43432 1585 aaKnown RBP23.24■■□□□ 1.31
CU633904.1-206ENST00000625115 AQRO60306 1485 aaKnown RBP eCLIP23.23■■□□□ 1.31
CU633904.1-206ENST00000625115 TRHP20396 242 aaPredicted RBP23.21■■□□□ 1.31
CU633904.1-206ENST00000625115 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
CU633904.1-206ENST00000625115 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
CU633904.1-206ENST00000625115 CHD1O14646 1710 aa23.16■■□□□ 1.3
CU633904.1-206ENST00000625115 TARBP1Q13395 1621 aaKnown RBP23.12■■□□□ 1.29
CU633904.1-206ENST00000625115 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
CU633904.1-206ENST00000625115 POLA1P09884 1462 aaPredicted RBP23.06■■□□□ 1.28
CU633904.1-206ENST00000625115 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
CU633904.1-206ENST00000625115 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
CU633904.1-206ENST00000625115 SOGA1O94964 1423 aa23■■□□□ 1.27
CU633904.1-206ENST00000625115 CHMP7Q8WUX9 453 aaPredicted RBP22.95■■□□□ 1.26
CU633904.1-206ENST00000625115 SNAPC4Q5SXM2 1469 aa22.92■■□□□ 1.26
CU633904.1-206ENST00000625115 FGD5Q6ZNL6 1462 aa22.89■■□□□ 1.25
CU633904.1-206ENST00000625115 CLASP1Q7Z460 1538 aa22.83■■□□□ 1.25
CU633904.1-206ENST00000625115 SYNJ1O43426 1573 aa22.82■■□□□ 1.24
CU633904.1-206ENST00000625115 CUX1P39880 1505 aa22.81■■□□□ 1.24
CU633904.1-206ENST00000625115 GRIN2BQ13224 1484 aa22.79■■□□□ 1.24
CU633904.1-206ENST00000625115 MAGI1Q96QZ7 1491 aaPredicted RBP22.79■■□□□ 1.24
CU633904.1-206ENST00000625115 AEBP2Q6ZN18 517 aaPredicted RBP22.78■■□□□ 1.24
CU633904.1-206ENST00000625115 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
CU633904.1-206ENST00000625115 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
CU633904.1-206ENST00000625115 GAPVD1Q14C86 1478 aa22.7■■□□□ 1.22
CU633904.1-206ENST00000625115 PBRM1Q86U86 1689 aa22.66■■□□□ 1.22
CU633904.1-206ENST00000625115 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
CU633904.1-206ENST00000625115 ERCC6L2Q5T890 1561 aa22.55■■□□□ 1.2
CU633904.1-206ENST00000625115 ABCA5Q8WWZ7 1642 aa22.54■■□□□ 1.2
CU633904.1-206ENST00000625115 SUPT5HO00267 1087 aaKnown RBP22.51■■□□□ 1.19
CU633904.1-206ENST00000625115 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
CU633904.1-206ENST00000625115 WRNQ14191 1432 aaPredicted RBP eCLIP22.45■■□□□ 1.18
CU633904.1-206ENST00000625115 CEP170Q5SW79 1584 aa22.45■■□□□ 1.18
CU633904.1-206ENST00000625115 NUP160Q12769 1436 aa22.41■■□□□ 1.18
CU633904.1-206ENST00000625115 ADAMTS12P58397 1594 aa22.41■■□□□ 1.18
CU633904.1-206ENST00000625115 FHAD1B1AJZ9 1412 aa22.37■■□□□ 1.17
CU633904.1-206ENST00000625115 SHROOM2Q13796 1616 aa22.32■■□□□ 1.16
CU633904.1-206ENST00000625115 TOP2BQ02880 1626 aa22.31■■□□□ 1.16
CU633904.1-206ENST00000625115 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
CU633904.1-206ENST00000625115 JPH4Q96JJ6 628 aa22.3■■□□□ 1.16
CU633904.1-206ENST00000625115 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
CU633904.1-206ENST00000625115 KIF13AQ9H1H9 1805 aa22.27■■□□□ 1.15
CU633904.1-206ENST00000625115 ERICH3Q5RHP9 1530 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms