RNA–Protein interactions for RNA: ENST00000625103.1

ABCA2-224, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 3

Gene ABCA2, Length 371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-224ENST00000625103 NISCHQ9Y2I1 1504 aa39.68■■■■□ 3.94
ABCA2-224ENST00000625103 ABCC9O60706 1549 aa35.88■■■■□ 3.33
ABCA2-224ENST00000625103 CCDC180Q9P1Z9 1646 aa35.68■■■■□ 3.3
ABCA2-224ENST00000625103 RB1CC1Q8TDY2 1594 aa34■■■■□ 3.03
ABCA2-224ENST00000625103 DNAJC5BQ9UF47 199 aa34■■■■□ 3.03
ABCA2-224ENST00000625103 NACADO15069 1562 aa33.74■■■□□ 2.99
ABCA2-224ENST00000625103 UNC13AQ9UPW8 1703 aa33.43■■■□□ 2.94
ABCA2-224ENST00000625103 PABPN1Q86U42 306 aaKnown RBP eCLIP33.34■■■□□ 2.93
ABCA2-224ENST00000625103 DCAF8L2P0C7V8 631 aa33.31■■■□□ 2.92
ABCA2-224ENST00000625103 MYO15BQ96JP2 1530 aa33.27■■■□□ 2.92
ABCA2-224ENST00000625103 BICRAQ9NZM4 1560 aa33.23■■■□□ 2.91
ABCA2-224ENST00000625103 ZCCHC6Q5VYS8 1495 aaKnown RBP32.88■■■□□ 2.85
ABCA2-224ENST00000625103 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
ABCA2-224ENST00000625103 SHROOM4Q9ULL8 1493 aa32.58■■■□□ 2.81
ABCA2-224ENST00000625103 SCRIBQ14160 1630 aa32.5■■■□□ 2.79
ABCA2-224ENST00000625103 CC2D2AQ9P2K1 1620 aa32.44■■■□□ 2.78
ABCA2-224ENST00000625103 CECR2Q9BXF3 1484 aa32.32■■■□□ 2.76
ABCA2-224ENST00000625103 EIF4G1Q04637 1599 aaKnown RBP32.32■■■□□ 2.76
ABCA2-224ENST00000625103 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
ABCA2-224ENST00000625103 NCAPD3P42695 1498 aa31.21■■■□□ 2.59
ABCA2-224ENST00000625103 ATAD2BQ9ULI0 1458 aa31.09■■■□□ 2.57
ABCA2-224ENST00000625103 SMARCA4P51532 1647 aa31.01■■■□□ 2.55
ABCA2-224ENST00000625103 CUX2O14529 1486 aa30.98■■■□□ 2.55
ABCA2-224ENST00000625103 HMGXB3Q12766 1538 aa30.95■■■□□ 2.55
ABCA2-224ENST00000625103 SMARCA2P51531 1590 aa30.91■■■□□ 2.54
ABCA2-224ENST00000625103 ERCC6Q03468 1493 aa30.86■■■□□ 2.53
ABCA2-224ENST00000625103 NESP48681 1621 aa30.84■■■□□ 2.53
ABCA2-224ENST00000625103 PEG3Q9GZU2 1588 aa30.75■■■□□ 2.51
ABCA2-224ENST00000625103 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
ABCA2-224ENST00000625103 BAZ1BQ9UIG0 1483 aaKnown RBP30.69■■■□□ 2.5
ABCA2-224ENST00000625103 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
ABCA2-224ENST00000625103 THOC2Q8NI27 1593 aaKnown RBP30.59■■■□□ 2.49
ABCA2-224ENST00000625103 LAMC3Q9Y6N6 1575 aa30.49■■■□□ 2.47
ABCA2-224ENST00000625103 KIF21AQ7Z4S6 1674 aa30.42■■■□□ 2.46
ABCA2-224ENST00000625103 PDS5BQ9NTI5 1447 aa30.23■■■□□ 2.43
ABCA2-224ENST00000625103 WIZO95785 1651 aa30.23■■■□□ 2.43
ABCA2-224ENST00000625103 CADPSQ9ULU8 1353 aa30.19■■■□□ 2.42
ABCA2-224ENST00000625103 WDR62O43379 1518 aa30.07■■■□□ 2.4
ABCA2-224ENST00000625103 MRC2Q9UBG0 1479 aa30.07■■■□□ 2.4
ABCA2-224ENST00000625103 RSF1Q96T23 1441 aaPredicted RBP29.88■■■□□ 2.37
ABCA2-224ENST00000625103 CEP164Q9UPV0 1460 aa29.87■■■□□ 2.37
ABCA2-224ENST00000625103 CFTRP13569 1480 aa29.86■■■□□ 2.37
ABCA2-224ENST00000625103 FANCD2Q9BXW9 1451 aa29.86■■■□□ 2.37
ABCA2-224ENST00000625103 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
ABCA2-224ENST00000625103 URB2Q14146 1524 aaKnown RBP29.72■■■□□ 2.35
ABCA2-224ENST00000625103 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
ABCA2-224ENST00000625103 PRDM2Q13029 1718 aa29.54■■■□□ 2.32
ABCA2-224ENST00000625103 CCDC88BA6NC98 1476 aa29.46■■■□□ 2.31
ABCA2-224ENST00000625103 OSCARQ8IYS5 282 aa29.42■■■□□ 2.3
ABCA2-224ENST00000625103 ZNF608Q9ULD9 1512 aaPredicted RBP29.39■■■□□ 2.3
ABCA2-224ENST00000625103 TOPBP1Q92547 1522 aa29.31■■■□□ 2.28
ABCA2-224ENST00000625103 IFT140Q96RY7 1462 aa29.29■■■□□ 2.28
ABCA2-224ENST00000625103 RIMBP3CA6NJZ7 1639 aa29.24■■■□□ 2.27
ABCA2-224ENST00000625103 RIMBP3BA6NNM3 1639 aa29.24■■■□□ 2.27
ABCA2-224ENST00000625103 RIMBP3Q9UFD9 1639 aa29.24■■■□□ 2.27
ABCA2-224ENST00000625103 EIF4G3O43432 1585 aaKnown RBP29.18■■■□□ 2.26
ABCA2-224ENST00000625103 DNMBPQ6XZF7 1577 aa29.16■■■□□ 2.26
ABCA2-224ENST00000625103 TARBP1Q13395 1621 aaKnown RBP29.12■■■□□ 2.25
ABCA2-224ENST00000625103 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
ABCA2-224ENST00000625103 ABCC8Q09428 1581 aa29.09■■■□□ 2.25
ABCA2-224ENST00000625103 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.24
ABCA2-224ENST00000625103 CHD1O14646 1710 aa29.01■■■□□ 2.23
ABCA2-224ENST00000625103 POLA1P09884 1462 aaPredicted RBP29.01■■■□□ 2.23
ABCA2-224ENST00000625103 RAD54L2Q9Y4B4 1467 aa28.91■■■□□ 2.22
ABCA2-224ENST00000625103 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
ABCA2-224ENST00000625103 TDRD9Q8NDG6 1382 aaKnown RBP28.79■■■□□ 2.2
ABCA2-224ENST00000625103 CYB5RLQ6IPT4 315 aa28.78■■■□□ 2.2
ABCA2-224ENST00000625103 CUX1P39880 1505 aa28.78■■■□□ 2.2
ABCA2-224ENST00000625103 SOGA1O94964 1423 aa28.77■■■□□ 2.2
ABCA2-224ENST00000625103 FGD5Q6ZNL6 1462 aa28.77■■■□□ 2.2
ABCA2-224ENST00000625103 SNAPC4Q5SXM2 1469 aa28.72■■■□□ 2.19
ABCA2-224ENST00000625103 CLASP1Q7Z460 1538 aa28.71■■■□□ 2.19
ABCA2-224ENST00000625103 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
ABCA2-224ENST00000625103 FBLN2P98095 1184 aa28.68■■■□□ 2.18
ABCA2-224ENST00000625103 MAGI1Q96QZ7 1491 aaPredicted RBP28.59■■■□□ 2.17
ABCA2-224ENST00000625103 GRIN2BQ13224 1484 aa28.56■■■□□ 2.16
ABCA2-224ENST00000625103 SYNJ1O43426 1573 aa28.52■■■□□ 2.16
ABCA2-224ENST00000625103 SYNJ2O15056 1496 aa28.52■■■□□ 2.16
ABCA2-224ENST00000625103 PBRM1Q86U86 1689 aa28.51■■■□□ 2.15
ABCA2-224ENST00000625103 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
ABCA2-224ENST00000625103 CHMP7Q8WUX9 453 aaPredicted RBP28.46■■■□□ 2.15
ABCA2-224ENST00000625103 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
ABCA2-224ENST00000625103 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
ABCA2-224ENST00000625103 TRHP20396 242 aaPredicted RBP28.42■■■□□ 2.14
ABCA2-224ENST00000625103 ERCC6L2Q5T890 1561 aa28.3■■■□□ 2.12
ABCA2-224ENST00000625103 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
ABCA2-224ENST00000625103 GRIN2AQ12879 1464 aa28.24■■■□□ 2.11
ABCA2-224ENST00000625103 BIVM-ERCC5R4GMW8 1640 aa28.23■■■□□ 2.11
ABCA2-224ENST00000625103 CEP170Q5SW79 1584 aa28.23■■■□□ 2.11
ABCA2-224ENST00000625103 NUP160Q12769 1436 aa28.21■■■□□ 2.11
ABCA2-224ENST00000625103 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
ABCA2-224ENST00000625103 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
ABCA2-224ENST00000625103 WRNQ14191 1432 aaPredicted RBP eCLIP28.18■■■□□ 2.1
ABCA2-224ENST00000625103 SHROOM2Q13796 1616 aa28.14■■■□□ 2.09
ABCA2-224ENST00000625103 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
ABCA2-224ENST00000625103 ERICH3Q5RHP9 1530 aa28.04■■■□□ 2.08
ABCA2-224ENST00000625103 KIF13AQ9H1H9 1805 aa27.88■■■□□ 2.05
ABCA2-224ENST00000625103 PRG4Q92954 1404 aaPredicted RBP27.86■■■□□ 2.05
ABCA2-224ENST00000625103 RUSC2Q8N2Y8 1516 aa27.86■■■□□ 2.05
ABCA2-224ENST00000625103 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms