RNA–Protein interactions for RNA: ENST00000625044.1

PCDHB16-202, Transcript of protocadherin beta 16, humanhuman

TSL 2

Gene PCDHB16, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-202ENST00000625044 NISCHQ9Y2I1 1504 aa49.14■■■■■ 5.46
PCDHB16-202ENST00000625044 CCDC180Q9P1Z9 1646 aa43.67■■■■■ 4.58
PCDHB16-202ENST00000625044 ABCC9O60706 1549 aa42.89■■■■■ 4.46
PCDHB16-202ENST00000625044 RB1CC1Q8TDY2 1594 aa41.17■■■■■ 4.18
PCDHB16-202ENST00000625044 NACADO15069 1562 aa41.12■■■■■ 4.17
PCDHB16-202ENST00000625044 DCAF8L2P0C7V8 631 aa41.1■■■■■ 4.17
PCDHB16-202ENST00000625044 ZCCHC6Q5VYS8 1495 aaKnown RBP40.92■■■■■ 4.14
PCDHB16-202ENST00000625044 MYO15BQ96JP2 1530 aa40.85■■■■■ 4.13
PCDHB16-202ENST00000625044 DCAF1Q9Y4B6 1507 aa40.65■■■■■ 4.1
PCDHB16-202ENST00000625044 UNC13AQ9UPW8 1703 aa40.22■■■■■ 4.03
PCDHB16-202ENST00000625044 PABPN1Q86U42 306 aaKnown RBP eCLIP40.09■■■■■ 4.01
PCDHB16-202ENST00000625044 BICRAQ9NZM4 1560 aa39.97■■■■□ 3.99
PCDHB16-202ENST00000625044 SCRIBQ14160 1630 aa39.88■■■■□ 3.97
PCDHB16-202ENST00000625044 SHROOM4Q9ULL8 1493 aa39.51■■■■□ 3.92
PCDHB16-202ENST00000625044 DNAJC5BQ9UF47 199 aa39.51■■■■□ 3.92
PCDHB16-202ENST00000625044 EIF4G1Q04637 1599 aaKnown RBP38.91■■■■□ 3.82
PCDHB16-202ENST00000625044 CC2D2AQ9P2K1 1620 aa38.77■■■■□ 3.8
PCDHB16-202ENST00000625044 CECR2Q9BXF3 1484 aa38.54■■■■□ 3.76
PCDHB16-202ENST00000625044 SMARCA4P51532 1647 aa38.13■■■■□ 3.69
PCDHB16-202ENST00000625044 BAZ1AQ9NRL2 1556 aaPredicted RBP38.07■■■■□ 3.69
PCDHB16-202ENST00000625044 ATAD2BQ9ULI0 1458 aa37.98■■■■□ 3.67
PCDHB16-202ENST00000625044 NCAPD3P42695 1498 aa37.97■■■■□ 3.67
PCDHB16-202ENST00000625044 SMARCA2P51531 1590 aa37.89■■■■□ 3.66
PCDHB16-202ENST00000625044 MROH2BQ7Z745 1585 aa37.89■■■■□ 3.66
PCDHB16-202ENST00000625044 PEG3Q9GZU2 1588 aa37.77■■■■□ 3.64
PCDHB16-202ENST00000625044 HMGXB3Q12766 1538 aa37.75■■■■□ 3.63
PCDHB16-202ENST00000625044 BAZ1BQ9UIG0 1483 aaKnown RBP37.64■■■■□ 3.62
PCDHB16-202ENST00000625044 WIZO95785 1651 aa37.44■■■■□ 3.58
PCDHB16-202ENST00000625044 RSF1Q96T23 1441 aaPredicted RBP37.44■■■■□ 3.58
PCDHB16-202ENST00000625044 NESP48681 1621 aa37.1■■■■□ 3.53
PCDHB16-202ENST00000625044 TOP2AP11388 1531 aaKnown RBP37.05■■■■□ 3.52
PCDHB16-202ENST00000625044 ERCC6Q03468 1493 aa36.95■■■■□ 3.51
PCDHB16-202ENST00000625044 LAMC3Q9Y6N6 1575 aa36.95■■■■□ 3.51
PCDHB16-202ENST00000625044 CADPSQ9ULU8 1353 aa36.86■■■■□ 3.49
PCDHB16-202ENST00000625044 PDS5BQ9NTI5 1447 aa36.72■■■■□ 3.47
PCDHB16-202ENST00000625044 CCDC88BA6NC98 1476 aa36.63■■■■□ 3.45
PCDHB16-202ENST00000625044 CFTRP13569 1480 aa36.62■■■■□ 3.45
PCDHB16-202ENST00000625044 KIF21AQ7Z4S6 1674 aa36.6■■■■□ 3.45
PCDHB16-202ENST00000625044 CUX2O14529 1486 aa36.59■■■■□ 3.45
PCDHB16-202ENST00000625044 THOC2Q8NI27 1593 aaKnown RBP36.52■■■■□ 3.44
PCDHB16-202ENST00000625044 FANCD2Q9BXW9 1451 aa36.43■■■■□ 3.42
PCDHB16-202ENST00000625044 SUPT5HO00267 1087 aaKnown RBP36.41■■■■□ 3.42
PCDHB16-202ENST00000625044 CEP164Q9UPV0 1460 aa36.38■■■■□ 3.41
PCDHB16-202ENST00000625044 MRC2Q9UBG0 1479 aa36.36■■■■□ 3.41
PCDHB16-202ENST00000625044 PRDM2Q13029 1718 aa36.24■■■■□ 3.39
PCDHB16-202ENST00000625044 WDR62O43379 1518 aa36.24■■■■□ 3.39
PCDHB16-202ENST00000625044 URB2Q14146 1524 aaKnown RBP36.09■■■■□ 3.37
PCDHB16-202ENST00000625044 TOPBP1Q92547 1522 aa35.84■■■■□ 3.33
PCDHB16-202ENST00000625044 ABCC8Q09428 1581 aa35.8■■■■□ 3.32
PCDHB16-202ENST00000625044 DNMBPQ6XZF7 1577 aa35.76■■■■□ 3.32
PCDHB16-202ENST00000625044 IFT140Q96RY7 1462 aa35.62■■■■□ 3.29
PCDHB16-202ENST00000625044 DNAJC5Q9H3Z4 198 aa35.62■■■■□ 3.29
PCDHB16-202ENST00000625044 CUX1P39880 1505 aa35.55■■■■□ 3.28
PCDHB16-202ENST00000625044 POLA1P09884 1462 aaPredicted RBP35.54■■■■□ 3.28
PCDHB16-202ENST00000625044 ZNF608Q9ULD9 1512 aaPredicted RBP35.51■■■■□ 3.27
PCDHB16-202ENST00000625044 TARBP1Q13395 1621 aaKnown RBP35.45■■■■□ 3.27
PCDHB16-202ENST00000625044 FGD5Q6ZNL6 1462 aa35.43■■■■□ 3.26
PCDHB16-202ENST00000625044 RAD54L2Q9Y4B4 1467 aa35.39■■■■□ 3.26
PCDHB16-202ENST00000625044 SOGA1O94964 1423 aa35.39■■■■□ 3.26
PCDHB16-202ENST00000625044 EIF4G3O43432 1585 aaKnown RBP35.32■■■■□ 3.24
PCDHB16-202ENST00000625044 AQRO60306 1485 aaKnown RBP eCLIP35.29■■■■□ 3.24
PCDHB16-202ENST00000625044 WRNQ14191 1432 aaPredicted RBP eCLIP35.27■■■■□ 3.24
PCDHB16-202ENST00000625044 TDRD9Q8NDG6 1382 aaKnown RBP35.22■■■■□ 3.23
PCDHB16-202ENST00000625044 SYNJ1O43426 1573 aa35.19■■■■□ 3.22
PCDHB16-202ENST00000625044 TOP2BQ02880 1626 aa35.19■■■■□ 3.22
PCDHB16-202ENST00000625044 BIVM-ERCC5R4GMW8 1640 aa35.17■■■■□ 3.22
PCDHB16-202ENST00000625044 WDR97A6NE52 1622 aa35.12■■■■□ 3.21
PCDHB16-202ENST00000625044 ABCA10Q8WWZ4 1543 aa35.08■■■■□ 3.21
PCDHB16-202ENST00000625044 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
PCDHB16-202ENST00000625044 GRIN2BQ13224 1484 aa34.97■■■■□ 3.19
PCDHB16-202ENST00000625044 GAPVD1Q14C86 1478 aa34.97■■■■□ 3.19
PCDHB16-202ENST00000625044 SNAPC4Q5SXM2 1469 aa34.95■■■■□ 3.19
PCDHB16-202ENST00000625044 ABCA5Q8WWZ7 1642 aa34.94■■■■□ 3.18
PCDHB16-202ENST00000625044 MAGI1Q96QZ7 1491 aaPredicted RBP34.89■■■■□ 3.18
PCDHB16-202ENST00000625044 FBLN2P98095 1184 aa34.87■■■■□ 3.17
PCDHB16-202ENST00000625044 CHD1O14646 1710 aa34.86■■■■□ 3.17
PCDHB16-202ENST00000625044 PBRM1Q86U86 1689 aa34.84■■■■□ 3.17
PCDHB16-202ENST00000625044 CHMP7Q8WUX9 453 aaPredicted RBP34.76■■■■□ 3.16
PCDHB16-202ENST00000625044 SYNJ2O15056 1496 aa34.76■■■■□ 3.15
PCDHB16-202ENST00000625044 ERICH3Q5RHP9 1530 aa34.65■■■■□ 3.14
PCDHB16-202ENST00000625044 ADAMTS12P58397 1594 aa34.61■■■■□ 3.13
PCDHB16-202ENST00000625044 FHAD1B1AJZ9 1412 aa34.56■■■■□ 3.12
PCDHB16-202ENST00000625044 CLASP1Q7Z460 1538 aa34.54■■■■□ 3.12
PCDHB16-202ENST00000625044 KIF27Q86VH2 1401 aa34.54■■■■□ 3.12
PCDHB16-202ENST00000625044 GRIN2AQ12879 1464 aa34.53■■■■□ 3.12
PCDHB16-202ENST00000625044 ARHGEF11O15085 1522 aa34.51■■■■□ 3.12
PCDHB16-202ENST00000625044 RIMBP3CA6NJZ7 1639 aa34.5■■■■□ 3.11
PCDHB16-202ENST00000625044 RIMBP3BA6NNM3 1639 aa34.5■■■■□ 3.11
PCDHB16-202ENST00000625044 RIMBP3Q9UFD9 1639 aa34.5■■■■□ 3.11
PCDHB16-202ENST00000625044 IGF1RP08069 1367 aa34.45■■■■□ 3.11
PCDHB16-202ENST00000625044 TRIM41Q8WV44 630 aa34.4■■■■□ 3.1
PCDHB16-202ENST00000625044 NUP160Q12769 1436 aa34.39■■■■□ 3.1
PCDHB16-202ENST00000625044 CEP170Q5SW79 1584 aa34.36■■■■□ 3.09
PCDHB16-202ENST00000625044 CUL7Q14999 1698 aa34.28■■■■□ 3.08
PCDHB16-202ENST00000625044 ARAP1Q96P48 1450 aa34.24■■■■□ 3.07
PCDHB16-202ENST00000625044 RUSC2Q8N2Y8 1516 aa34.23■■■■□ 3.07
PCDHB16-202ENST00000625044 CARMIL1Q5VZK9 1371 aa34.22■■■■□ 3.07
PCDHB16-202ENST00000625044 CYB5RLQ6IPT4 315 aa34.21■■■■□ 3.07
PCDHB16-202ENST00000625044 SHROOM2Q13796 1616 aa34.12■■■■□ 3.05
PCDHB16-202ENST00000625044 ERCC6L2Q5T890 1561 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms