RNA–Protein interactions for RNA: ENST00000625033.1

PCDHB2-205, Transcript of protocadherin beta 2, humanhuman

TSL 4 BASIC

Gene PCDHB2, Length 519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-205ENST00000625033 NISCHQ9Y2I1 1504 aa27.61■■■□□ 2.01
PCDHB2-205ENST00000625033 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
PCDHB2-205ENST00000625033 ABCC9O60706 1549 aa24.22■■□□□ 1.47
PCDHB2-205ENST00000625033 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
PCDHB2-205ENST00000625033 NACADO15069 1562 aa23.18■■□□□ 1.3
PCDHB2-205ENST00000625033 ZCCHC6Q5VYS8 1495 aaKnown RBP23■■□□□ 1.27
PCDHB2-205ENST00000625033 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
PCDHB2-205ENST00000625033 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
PCDHB2-205ENST00000625033 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
PCDHB2-205ENST00000625033 DCAF1Q9Y4B6 1507 aa22.85■■□□□ 1.25
PCDHB2-205ENST00000625033 BICRAQ9NZM4 1560 aa22.66■■□□□ 1.22
PCDHB2-205ENST00000625033 PABPN1Q86U42 306 aaKnown RBP eCLIP22.52■■□□□ 1.2
PCDHB2-205ENST00000625033 SCRIBQ14160 1630 aa22.5■■□□□ 1.19
PCDHB2-205ENST00000625033 DNAJC5BQ9UF47 199 aa22.36■■□□□ 1.17
PCDHB2-205ENST00000625033 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
PCDHB2-205ENST00000625033 EIF4G1Q04637 1599 aaKnown RBP22.02■■□□□ 1.12
PCDHB2-205ENST00000625033 CC2D2AQ9P2K1 1620 aa21.98■■□□□ 1.11
PCDHB2-205ENST00000625033 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
PCDHB2-205ENST00000625033 SMARCA4P51532 1647 aa21.52■■□□□ 1.04
PCDHB2-205ENST00000625033 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
PCDHB2-205ENST00000625033 ATAD2BQ9ULI0 1458 aa21.37■■□□□ 1.01
PCDHB2-205ENST00000625033 NCAPD3P42695 1498 aa21.35■■□□□ 1.01
PCDHB2-205ENST00000625033 SMARCA2P51531 1590 aa21.33■■□□□ 1.01
PCDHB2-205ENST00000625033 PEG3Q9GZU2 1588 aa21.31■■□□□ 1
PCDHB2-205ENST00000625033 HMGXB3Q12766 1538 aa21.31■■□□□ 1
PCDHB2-205ENST00000625033 MROH2BQ7Z745 1585 aa21.3■■□□□ 1
PCDHB2-205ENST00000625033 BAZ1BQ9UIG0 1483 aaKnown RBP21.16■□□□□ 0.98
PCDHB2-205ENST00000625033 WIZO95785 1651 aa21.12■□□□□ 0.97
PCDHB2-205ENST00000625033 NESP48681 1621 aa20.96■□□□□ 0.95
PCDHB2-205ENST00000625033 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
PCDHB2-205ENST00000625033 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
PCDHB2-205ENST00000625033 ERCC6Q03468 1493 aa20.83■□□□□ 0.93
PCDHB2-205ENST00000625033 TOP2AP11388 1531 aaKnown RBP20.83■□□□□ 0.92
PCDHB2-205ENST00000625033 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.92
PCDHB2-205ENST00000625033 THOC2Q8NI27 1593 aaKnown RBP20.77■□□□□ 0.92
PCDHB2-205ENST00000625033 CUX2O14529 1486 aa20.73■□□□□ 0.91
PCDHB2-205ENST00000625033 CADPSQ9ULU8 1353 aa20.68■□□□□ 0.9
PCDHB2-205ENST00000625033 PRDM2Q13029 1718 aa20.64■□□□□ 0.89
PCDHB2-205ENST00000625033 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
PCDHB2-205ENST00000625033 CFTRP13569 1480 aa20.58■□□□□ 0.89
PCDHB2-205ENST00000625033 CCDC88BA6NC98 1476 aa20.54■□□□□ 0.88
PCDHB2-205ENST00000625033 WDR62O43379 1518 aa20.51■□□□□ 0.87
PCDHB2-205ENST00000625033 FANCD2Q9BXW9 1451 aa20.5■□□□□ 0.87
PCDHB2-205ENST00000625033 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
PCDHB2-205ENST00000625033 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
PCDHB2-205ENST00000625033 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
PCDHB2-205ENST00000625033 DNAJC5Q9H3Z4 198 aa20.19■□□□□ 0.82
PCDHB2-205ENST00000625033 TOPBP1Q92547 1522 aa20.18■□□□□ 0.82
PCDHB2-205ENST00000625033 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
PCDHB2-205ENST00000625033 SUPT5HO00267 1087 aaKnown RBP20.13■□□□□ 0.81
PCDHB2-205ENST00000625033 ABCC8Q09428 1581 aa20.08■□□□□ 0.81
PCDHB2-205ENST00000625033 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
PCDHB2-205ENST00000625033 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
PCDHB2-205ENST00000625033 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
PCDHB2-205ENST00000625033 EIF4G3O43432 1585 aaKnown RBP20.02■□□□□ 0.8
PCDHB2-205ENST00000625033 CUX1P39880 1505 aa20.01■□□□□ 0.79
PCDHB2-205ENST00000625033 POLA1P09884 1462 aaPredicted RBP19.99■□□□□ 0.79
PCDHB2-205ENST00000625033 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
PCDHB2-205ENST00000625033 FGD5Q6ZNL6 1462 aa19.92■□□□□ 0.78
PCDHB2-205ENST00000625033 RAD54L2Q9Y4B4 1467 aa19.9■□□□□ 0.78
PCDHB2-205ENST00000625033 BIVM-ERCC5R4GMW8 1640 aa19.85■□□□□ 0.77
PCDHB2-205ENST00000625033 CHD1O14646 1710 aa19.85■□□□□ 0.77
PCDHB2-205ENST00000625033 AQRO60306 1485 aaKnown RBP eCLIP19.84■□□□□ 0.77
PCDHB2-205ENST00000625033 SOGA1O94964 1423 aa19.82■□□□□ 0.76
PCDHB2-205ENST00000625033 SYNJ1O43426 1573 aa19.81■□□□□ 0.76
PCDHB2-205ENST00000625033 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
PCDHB2-205ENST00000625033 PBRM1Q86U86 1689 aa19.78■□□□□ 0.76
PCDHB2-205ENST00000625033 ABCA5Q8WWZ7 1642 aa19.75■□□□□ 0.75
PCDHB2-205ENST00000625033 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
PCDHB2-205ENST00000625033 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
PCDHB2-205ENST00000625033 WRNQ14191 1432 aaPredicted RBP eCLIP19.71■□□□□ 0.75
PCDHB2-205ENST00000625033 SNAPC4Q5SXM2 1469 aa19.69■□□□□ 0.74
PCDHB2-205ENST00000625033 OSCARQ8IYS5 282 aa19.69■□□□□ 0.74
PCDHB2-205ENST00000625033 GRIN2BQ13224 1484 aa19.64■□□□□ 0.73
PCDHB2-205ENST00000625033 RIMBP3CA6NJZ7 1639 aa19.63■□□□□ 0.73
PCDHB2-205ENST00000625033 RIMBP3BA6NNM3 1639 aa19.63■□□□□ 0.73
PCDHB2-205ENST00000625033 RIMBP3Q9UFD9 1639 aa19.63■□□□□ 0.73
PCDHB2-205ENST00000625033 GAPVD1Q14C86 1478 aa19.63■□□□□ 0.73
PCDHB2-205ENST00000625033 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
PCDHB2-205ENST00000625033 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
PCDHB2-205ENST00000625033 ARHGEF11O15085 1522 aa19.56■□□□□ 0.72
PCDHB2-205ENST00000625033 SYNJ2O15056 1496 aa19.55■□□□□ 0.72
PCDHB2-205ENST00000625033 ADAMTS12P58397 1594 aa19.55■□□□□ 0.72
PCDHB2-205ENST00000625033 FBLN2P98095 1184 aa19.49■□□□□ 0.71
PCDHB2-205ENST00000625033 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
PCDHB2-205ENST00000625033 GRIN2AQ12879 1464 aa19.43■□□□□ 0.7
PCDHB2-205ENST00000625033 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
PCDHB2-205ENST00000625033 CEP170Q5SW79 1584 aa19.42■□□□□ 0.7
PCDHB2-205ENST00000625033 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
PCDHB2-205ENST00000625033 ARAP1Q96P48 1450 aa19.4■□□□□ 0.7
PCDHB2-205ENST00000625033 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
PCDHB2-205ENST00000625033 NUP160Q12769 1436 aa19.35■□□□□ 0.69
PCDHB2-205ENST00000625033 CUL7Q14999 1698 aa19.33■□□□□ 0.68
PCDHB2-205ENST00000625033 SHROOM2Q13796 1616 aa19.33■□□□□ 0.68
PCDHB2-205ENST00000625033 ERCC6L2Q5T890 1561 aa19.29■□□□□ 0.68
PCDHB2-205ENST00000625033 RUSC2Q8N2Y8 1516 aa19.29■□□□□ 0.68
PCDHB2-205ENST00000625033 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
PCDHB2-205ENST00000625033 IGF1RP08069 1367 aa19.23■□□□□ 0.67
PCDHB2-205ENST00000625033 CYB5RLQ6IPT4 315 aa19.22■□□□□ 0.67
PCDHB2-205ENST00000625033 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms