RNA–Protein interactions for RNA: ENST00000625023.1

AC002540.1-201, humanhuman

BASIC

Gene AC002540.1, Length 1,349 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002540.1-201ENST00000625023 AEBP2Q6ZN18 517 aaPredicted RBP21.04■□□□□ 0.96
AC002540.1-201ENST00000625023 NISCHQ9Y2I1 1504 aa21.03■□□□□ 0.96
AC002540.1-201ENST00000625023 CHIC1Q5VXU3 224 aa19.78■□□□□ 0.76
AC002540.1-201ENST00000625023 CCDC180Q9P1Z9 1646 aa18.74■□□□□ 0.59
AC002540.1-201ENST00000625023 ABCC9O60706 1549 aa18.38■□□□□ 0.53
AC002540.1-201ENST00000625023 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
AC002540.1-201ENST00000625023 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
AC002540.1-201ENST00000625023 RB1CC1Q8TDY2 1594 aa17.65■□□□□ 0.42
AC002540.1-201ENST00000625023 NACADO15069 1562 aa17.64■□□□□ 0.42
AC002540.1-201ENST00000625023 MYO15BQ96JP2 1530 aa17.58■□□□□ 0.4
AC002540.1-201ENST00000625023 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
AC002540.1-201ENST00000625023 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
AC002540.1-201ENST00000625023 DCAF8L2P0C7V8 631 aa17.42■□□□□ 0.38
AC002540.1-201ENST00000625023 UNC13AQ9UPW8 1703 aa17.32■□□□□ 0.36
AC002540.1-201ENST00000625023 BICRAQ9NZM4 1560 aa17.22■□□□□ 0.35
AC002540.1-201ENST00000625023 PABPN1Q86U42 306 aaKnown RBP eCLIP17.14■□□□□ 0.33
AC002540.1-201ENST00000625023 DNAJC5BQ9UF47 199 aa17.07■□□□□ 0.32
AC002540.1-201ENST00000625023 SCRIBQ14160 1630 aa17.02■□□□□ 0.31
AC002540.1-201ENST00000625023 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
AC002540.1-201ENST00000625023 FOXD1Q16676 465 aa16.92■□□□□ 0.3
AC002540.1-201ENST00000625023 EIF4G1Q04637 1599 aaKnown RBP16.72■□□□□ 0.27
AC002540.1-201ENST00000625023 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
AC002540.1-201ENST00000625023 POTEDQ86YR6 584 aa16.56■□□□□ 0.24
AC002540.1-201ENST00000625023 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
AC002540.1-201ENST00000625023 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
AC002540.1-201ENST00000625023 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
AC002540.1-201ENST00000625023 ATAD2BQ9ULI0 1458 aa16.29■□□□□ 0.2
AC002540.1-201ENST00000625023 BAZ1AQ9NRL2 1556 aaPredicted RBP16.28■□□□□ 0.2
AC002540.1-201ENST00000625023 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
AC002540.1-201ENST00000625023 SMARCA2P51531 1590 aa16.22■□□□□ 0.19
AC002540.1-201ENST00000625023 HMGXB3Q12766 1538 aa16.21■□□□□ 0.19
AC002540.1-201ENST00000625023 MROH2BQ7Z745 1585 aa16.2■□□□□ 0.18
AC002540.1-201ENST00000625023 MSH5O43196 834 aa16.1■□□□□ 0.17
AC002540.1-201ENST00000625023 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.16
AC002540.1-201ENST00000625023 WIZO95785 1651 aa16■□□□□ 0.15
AC002540.1-201ENST00000625023 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
AC002540.1-201ENST00000625023 NESP48681 1621 aa15.91■□□□□ 0.14
AC002540.1-201ENST00000625023 LAMC3Q9Y6N6 1575 aa15.86■□□□□ 0.13
AC002540.1-201ENST00000625023 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
AC002540.1-201ENST00000625023 ERCC6Q03468 1493 aa15.8■□□□□ 0.12
AC002540.1-201ENST00000625023 CADPSQ9ULU8 1353 aa15.79■□□□□ 0.12
AC002540.1-201ENST00000625023 CUX2O14529 1486 aa15.77■□□□□ 0.12
AC002540.1-201ENST00000625023 THOC2Q8NI27 1593 aaKnown RBP15.73■□□□□ 0.11
AC002540.1-201ENST00000625023 PIAS4Q8N2W9 510 aaPredicted RBP15.72■□□□□ 0.11
AC002540.1-201ENST00000625023 PDS5BQ9NTI5 1447 aa15.72■□□□□ 0.11
AC002540.1-201ENST00000625023 KIF21AQ7Z4S6 1674 aa15.71■□□□□ 0.11
AC002540.1-201ENST00000625023 CFTRP13569 1480 aa15.7■□□□□ 0.1
AC002540.1-201ENST00000625023 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
AC002540.1-201ENST00000625023 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
AC002540.1-201ENST00000625023 MRC2Q9UBG0 1479 aa15.58■□□□□ 0.08
AC002540.1-201ENST00000625023 WDR62O43379 1518 aa15.58■□□□□ 0.08
AC002540.1-201ENST00000625023 CEP164Q9UPV0 1460 aa15.55■□□□□ 0.08
AC002540.1-201ENST00000625023 PRDM2Q13029 1718 aa15.55■□□□□ 0.08
AC002540.1-201ENST00000625023 URB2Q14146 1524 aaKnown RBP15.47■□□□□ 0.07
AC002540.1-201ENST00000625023 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
AC002540.1-201ENST00000625023 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
AC002540.1-201ENST00000625023 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
AC002540.1-201ENST00000625023 TOPBP1Q92547 1522 aa15.34■□□□□ 0.05
AC002540.1-201ENST00000625023 ADRA2BP18089 450 aa15.34■□□□□ 0.05
AC002540.1-201ENST00000625023 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
AC002540.1-201ENST00000625023 SUPT5HO00267 1087 aaKnown RBP15.32■□□□□ 0.04
AC002540.1-201ENST00000625023 DNMBPQ6XZF7 1577 aa15.31■□□□□ 0.04
AC002540.1-201ENST00000625023 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
AC002540.1-201ENST00000625023 TARBP1Q13395 1621 aaKnown RBP15.23■□□□□ 0.03
AC002540.1-201ENST00000625023 ZNF608Q9ULD9 1512 aaPredicted RBP15.22■□□□□ 0.03
AC002540.1-201ENST00000625023 POLA1P09884 1462 aaPredicted RBP15.21■□□□□ 0.03
AC002540.1-201ENST00000625023 CUX1P39880 1505 aa15.2■□□□□ 0.02
AC002540.1-201ENST00000625023 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
AC002540.1-201ENST00000625023 FGD5Q6ZNL6 1462 aa15.13■□□□□ 0.01
AC002540.1-201ENST00000625023 RAD54L2Q9Y4B4 1467 aa15.12■□□□□ 0.01
AC002540.1-201ENST00000625023 SOGA1O94964 1423 aa15.11■□□□□ 0.01
AC002540.1-201ENST00000625023 AQRO60306 1485 aaKnown RBP eCLIP15.1■□□□□ 0.01
AC002540.1-201ENST00000625023 WDR97A6NE52 1622 aa15.09■□□□□ 0.01
AC002540.1-201ENST00000625023 OSCARQ8IYS5 282 aa15.04■□□□□ -0
AC002540.1-201ENST00000625023 BIVM-ERCC5R4GMW8 1640 aa15.04■□□□□ -0
AC002540.1-201ENST00000625023 TDRD9Q8NDG6 1382 aaKnown RBP15.03■□□□□ -0
AC002540.1-201ENST00000625023 TOP2BQ02880 1626 aa15.03■□□□□ -0
AC002540.1-201ENST00000625023 ABCA10Q8WWZ4 1543 aa15.02■□□□□ -0
AC002540.1-201ENST00000625023 SYNJ1O43426 1573 aa15.02□□□□□ -0.01
AC002540.1-201ENST00000625023 WRNQ14191 1432 aaPredicted RBP eCLIP15.02□□□□□ -0.01
AC002540.1-201ENST00000625023 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
AC002540.1-201ENST00000625023 CHD1O14646 1710 aa14.96□□□□□ -0.01
AC002540.1-201ENST00000625023 GRIN2BQ13224 1484 aa14.96□□□□□ -0.02
AC002540.1-201ENST00000625023 GAPVD1Q14C86 1478 aa14.94□□□□□ -0.02
AC002540.1-201ENST00000625023 SNAPC4Q5SXM2 1469 aa14.94□□□□□ -0.02
AC002540.1-201ENST00000625023 MAGI1Q96QZ7 1491 aaPredicted RBP14.94□□□□□ -0.02
AC002540.1-201ENST00000625023 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
AC002540.1-201ENST00000625023 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
AC002540.1-201ENST00000625023 CLASP1Q7Z460 1538 aa14.85□□□□□ -0.03
AC002540.1-201ENST00000625023 RIMBP3CA6NJZ7 1639 aa14.85□□□□□ -0.03
AC002540.1-201ENST00000625023 RIMBP3BA6NNM3 1639 aa14.85□□□□□ -0.03
AC002540.1-201ENST00000625023 RIMBP3Q9UFD9 1639 aa14.85□□□□□ -0.03
AC002540.1-201ENST00000625023 ARHGEF11O15085 1522 aa14.84□□□□□ -0.03
AC002540.1-201ENST00000625023 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
AC002540.1-201ENST00000625023 FBLN2P98095 1184 aa14.81□□□□□ -0.04
AC002540.1-201ENST00000625023 CHMP7Q8WUX9 453 aaPredicted RBP14.81□□□□□ -0.04
AC002540.1-201ENST00000625023 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
AC002540.1-201ENST00000625023 GRIN2AQ12879 1464 aa14.78□□□□□ -0.04
AC002540.1-201ENST00000625023 FHAD1B1AJZ9 1412 aa14.77□□□□□ -0.04
AC002540.1-201ENST00000625023 NUP160Q12769 1436 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms