RNA–Protein interactions for RNA: ENST00000624412.3

CU633967.1-208, humanhuman

TSL 1 (best)

Gene CU633967.1, Length 944 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU633967.1-208ENST00000624412 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
CU633967.1-208ENST00000624412 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
CU633967.1-208ENST00000624412 CHIC1Q5VXU3 224 aa21.55■■□□□ 1.04
CU633967.1-208ENST00000624412 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
CU633967.1-208ENST00000624412 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
CU633967.1-208ENST00000624412 PHF23Q9BUL5 403 aaPredicted RBP18.94■□□□□ 0.62
CU633967.1-208ENST00000624412 ABCC9O60706 1549 aa18.69■□□□□ 0.58
CU633967.1-208ENST00000624412 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
CU633967.1-208ENST00000624412 NACADO15069 1562 aa18.04■□□□□ 0.48
CU633967.1-208ENST00000624412 ZCCHC6Q5VYS8 1495 aaKnown RBP18.02■□□□□ 0.48
CU633967.1-208ENST00000624412 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
CU633967.1-208ENST00000624412 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
CU633967.1-208ENST00000624412 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
CU633967.1-208ENST00000624412 FOXD1Q16676 465 aa17.74■□□□□ 0.43
CU633967.1-208ENST00000624412 UNC13AQ9UPW8 1703 aa17.69■□□□□ 0.42
CU633967.1-208ENST00000624412 SCRIBQ14160 1630 aa17.54■□□□□ 0.4
CU633967.1-208ENST00000624412 BICRAQ9NZM4 1560 aa17.48■□□□□ 0.39
CU633967.1-208ENST00000624412 PLPPR3Q6T4P5 718 aa17.44■□□□□ 0.38
CU633967.1-208ENST00000624412 PABPN1Q86U42 306 aaKnown RBP eCLIP17.4■□□□□ 0.38
CU633967.1-208ENST00000624412 SHROOM4Q9ULL8 1493 aa17.35■□□□□ 0.37
CU633967.1-208ENST00000624412 EIF4G1Q04637 1599 aaKnown RBP17.02■□□□□ 0.32
CU633967.1-208ENST00000624412 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
CU633967.1-208ENST00000624412 CC2D2AQ9P2K1 1620 aa16.94■□□□□ 0.3
CU633967.1-208ENST00000624412 POTEDQ86YR6 584 aa16.92■□□□□ 0.3
CU633967.1-208ENST00000624412 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
CU633967.1-208ENST00000624412 SMARCA4P51532 1647 aa16.78■□□□□ 0.28
CU633967.1-208ENST00000624412 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
CU633967.1-208ENST00000624412 ADRA2BP18089 450 aa16.75■□□□□ 0.27
CU633967.1-208ENST00000624412 PIAS4Q8N2W9 510 aaPredicted RBP16.75■□□□□ 0.27
CU633967.1-208ENST00000624412 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
CU633967.1-208ENST00000624412 MSH5O43196 834 aa16.68■□□□□ 0.26
CU633967.1-208ENST00000624412 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
CU633967.1-208ENST00000624412 MROH2BQ7Z745 1585 aa16.63■□□□□ 0.25
CU633967.1-208ENST00000624412 ATAD2BQ9ULI0 1458 aa16.61■□□□□ 0.25
CU633967.1-208ENST00000624412 PEG3Q9GZU2 1588 aa16.6■□□□□ 0.25
CU633967.1-208ENST00000624412 NCAPD3P42695 1498 aa16.59■□□□□ 0.25
CU633967.1-208ENST00000624412 HMGXB3Q12766 1538 aa16.58■□□□□ 0.24
CU633967.1-208ENST00000624412 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
CU633967.1-208ENST00000624412 WIZO95785 1651 aa16.49■□□□□ 0.23
CU633967.1-208ENST00000624412 RSF1Q96T23 1441 aaPredicted RBP16.43■□□□□ 0.22
CU633967.1-208ENST00000624412 TOP2AP11388 1531 aaKnown RBP16.34■□□□□ 0.21
CU633967.1-208ENST00000624412 LAMC3Q9Y6N6 1575 aa16.2■□□□□ 0.18
CU633967.1-208ENST00000624412 NESP48681 1621 aa16.18■□□□□ 0.18
CU633967.1-208ENST00000624412 ERCC6Q03468 1493 aa16.14■□□□□ 0.17
CU633967.1-208ENST00000624412 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
CU633967.1-208ENST00000624412 CCDC88BA6NC98 1476 aa16.08■□□□□ 0.16
CU633967.1-208ENST00000624412 KIF21AQ7Z4S6 1674 aa16.07■□□□□ 0.16
CU633967.1-208ENST00000624412 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
CU633967.1-208ENST00000624412 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
CU633967.1-208ENST00000624412 CFTRP13569 1480 aa16.03■□□□□ 0.16
CU633967.1-208ENST00000624412 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
CU633967.1-208ENST00000624412 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
CU633967.1-208ENST00000624412 CUX2O14529 1486 aa15.95■□□□□ 0.14
CU633967.1-208ENST00000624412 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
CU633967.1-208ENST00000624412 CEP164Q9UPV0 1460 aa15.95■□□□□ 0.14
CU633967.1-208ENST00000624412 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
CU633967.1-208ENST00000624412 WDR62O43379 1518 aa15.88■□□□□ 0.13
CU633967.1-208ENST00000624412 URB2Q14146 1524 aaKnown RBP15.78■□□□□ 0.12
CU633967.1-208ENST00000624412 DNMBPQ6XZF7 1577 aa15.73■□□□□ 0.11
CU633967.1-208ENST00000624412 TOPBP1Q92547 1522 aa15.71■□□□□ 0.11
CU633967.1-208ENST00000624412 ABCC8Q09428 1581 aa15.7■□□□□ 0.1
CU633967.1-208ENST00000624412 CUX1P39880 1505 aa15.61■□□□□ 0.09
CU633967.1-208ENST00000624412 IFT140Q96RY7 1462 aa15.6■□□□□ 0.09
CU633967.1-208ENST00000624412 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
CU633967.1-208ENST00000624412 POLA1P09884 1462 aaPredicted RBP15.58■□□□□ 0.08
CU633967.1-208ENST00000624412 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
CU633967.1-208ENST00000624412 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
CU633967.1-208ENST00000624412 BIVM-ERCC5R4GMW8 1640 aa15.54■□□□□ 0.08
CU633967.1-208ENST00000624412 TOP2BQ02880 1626 aa15.53■□□□□ 0.08
CU633967.1-208ENST00000624412 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
CU633967.1-208ENST00000624412 SYNJ1O43426 1573 aa15.52■□□□□ 0.07
CU633967.1-208ENST00000624412 EIF4G3O43432 1585 aaKnown RBP15.52■□□□□ 0.07
CU633967.1-208ENST00000624412 ZNF608Q9ULD9 1512 aaPredicted RBP15.49■□□□□ 0.07
CU633967.1-208ENST00000624412 WDR97A6NE52 1622 aa15.49■□□□□ 0.07
CU633967.1-208ENST00000624412 RAD54L2Q9Y4B4 1467 aa15.48■□□□□ 0.07
CU633967.1-208ENST00000624412 SOGA1O94964 1423 aa15.47■□□□□ 0.07
CU633967.1-208ENST00000624412 ABCA10Q8WWZ4 1543 aa15.41■□□□□ 0.06
CU633967.1-208ENST00000624412 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.06
CU633967.1-208ENST00000624412 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
CU633967.1-208ENST00000624412 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
CU633967.1-208ENST00000624412 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
CU633967.1-208ENST00000624412 GRIN2BQ13224 1484 aa15.33■□□□□ 0.04
CU633967.1-208ENST00000624412 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
CU633967.1-208ENST00000624412 CHD1O14646 1710 aa15.32■□□□□ 0.04
CU633967.1-208ENST00000624412 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
CU633967.1-208ENST00000624412 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
CU633967.1-208ENST00000624412 MAPK8IP2Q13387 824 aaPredicted RBP15.28■□□□□ 0.04
CU633967.1-208ENST00000624412 DNAJC5Q9H3Z4 198 aa15.28■□□□□ 0.04
CU633967.1-208ENST00000624412 PPP4R3CPQ6ZMV5 832 aa15.26■□□□□ 0.03
CU633967.1-208ENST00000624412 ADAMTS12P58397 1594 aa15.24■□□□□ 0.03
CU633967.1-208ENST00000624412 ERICH3Q5RHP9 1530 aa15.23■□□□□ 0.03
CU633967.1-208ENST00000624412 SYNJ2O15056 1496 aa15.23■□□□□ 0.03
CU633967.1-208ENST00000624412 OSCARQ8IYS5 282 aa15.2■□□□□ 0.02
CU633967.1-208ENST00000624412 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
CU633967.1-208ENST00000624412 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
CU633967.1-208ENST00000624412 FBLN2P98095 1184 aa15.18■□□□□ 0.02
CU633967.1-208ENST00000624412 CUL7Q14999 1698 aa15.16■□□□□ 0.02
CU633967.1-208ENST00000624412 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
CU633967.1-208ENST00000624412 FHAD1B1AJZ9 1412 aa15.15■□□□□ 0.02
CU633967.1-208ENST00000624412 GRIN2AQ12879 1464 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms