RNA–Protein interactions for RNA: ENST00000624387.3

ARHGEF9-215, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 3

Gene ARHGEF9, Length 547 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-215ENST00000624387 NISCHQ9Y2I1 1504 aa27.83■■■□□ 2.05
ARHGEF9-215ENST00000624387 CCDC180Q9P1Z9 1646 aa24.9■■□□□ 1.58
ARHGEF9-215ENST00000624387 ABCC9O60706 1549 aa24.65■■□□□ 1.54
ARHGEF9-215ENST00000624387 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
ARHGEF9-215ENST00000624387 NACADO15069 1562 aa23.48■■□□□ 1.35
ARHGEF9-215ENST00000624387 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
ARHGEF9-215ENST00000624387 MYO15BQ96JP2 1530 aa23.22■■□□□ 1.31
ARHGEF9-215ENST00000624387 ZCCHC6Q5VYS8 1495 aaKnown RBP23.11■■□□□ 1.29
ARHGEF9-215ENST00000624387 UNC13AQ9UPW8 1703 aa23.03■■□□□ 1.28
ARHGEF9-215ENST00000624387 DCAF1Q9Y4B6 1507 aa23.01■■□□□ 1.27
ARHGEF9-215ENST00000624387 PABPN1Q86U42 306 aaKnown RBP eCLIP22.98■■□□□ 1.27
ARHGEF9-215ENST00000624387 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
ARHGEF9-215ENST00000624387 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
ARHGEF9-215ENST00000624387 SCRIBQ14160 1630 aa22.71■■□□□ 1.23
ARHGEF9-215ENST00000624387 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
ARHGEF9-215ENST00000624387 EIF4G1Q04637 1599 aaKnown RBP22.29■■□□□ 1.16
ARHGEF9-215ENST00000624387 CC2D2AQ9P2K1 1620 aa22.28■■□□□ 1.16
ARHGEF9-215ENST00000624387 CECR2Q9BXF3 1484 aa22.19■■□□□ 1.14
ARHGEF9-215ENST00000624387 SMARCA4P51532 1647 aa21.67■■□□□ 1.06
ARHGEF9-215ENST00000624387 NCAPD3P42695 1498 aa21.64■■□□□ 1.06
ARHGEF9-215ENST00000624387 BAZ1AQ9NRL2 1556 aaPredicted RBP21.63■■□□□ 1.05
ARHGEF9-215ENST00000624387 SMARCA2P51531 1590 aa21.62■■□□□ 1.05
ARHGEF9-215ENST00000624387 ATAD2BQ9ULI0 1458 aa21.61■■□□□ 1.05
ARHGEF9-215ENST00000624387 HMGXB3Q12766 1538 aa21.53■■□□□ 1.04
ARHGEF9-215ENST00000624387 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
ARHGEF9-215ENST00000624387 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
ARHGEF9-215ENST00000624387 MROH2BQ7Z745 1585 aa21.43■■□□□ 1.02
ARHGEF9-215ENST00000624387 ERCC6Q03468 1493 aa21.33■■□□□ 1.01
ARHGEF9-215ENST00000624387 NESP48681 1621 aa21.21■□□□□ 0.99
ARHGEF9-215ENST00000624387 WIZO95785 1651 aa21.21■□□□□ 0.99
ARHGEF9-215ENST00000624387 CUX2O14529 1486 aa21.17■□□□□ 0.98
ARHGEF9-215ENST00000624387 LAMC3Q9Y6N6 1575 aa21.17■□□□□ 0.98
ARHGEF9-215ENST00000624387 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
ARHGEF9-215ENST00000624387 PDS5BQ9NTI5 1447 aa21.05■□□□□ 0.96
ARHGEF9-215ENST00000624387 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
ARHGEF9-215ENST00000624387 KIF21AQ7Z4S6 1674 aa20.99■□□□□ 0.95
ARHGEF9-215ENST00000624387 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
ARHGEF9-215ENST00000624387 THOC2Q8NI27 1593 aaKnown RBP20.97■□□□□ 0.95
ARHGEF9-215ENST00000624387 DNAJC5Q9H3Z4 198 aa20.84■□□□□ 0.93
ARHGEF9-215ENST00000624387 MRC2Q9UBG0 1479 aa20.82■□□□□ 0.92
ARHGEF9-215ENST00000624387 CFTRP13569 1480 aa20.81■□□□□ 0.92
ARHGEF9-215ENST00000624387 CEP164Q9UPV0 1460 aa20.81■□□□□ 0.92
ARHGEF9-215ENST00000624387 FANCD2Q9BXW9 1451 aa20.79■□□□□ 0.92
ARHGEF9-215ENST00000624387 WDR62O43379 1518 aa20.74■□□□□ 0.91
ARHGEF9-215ENST00000624387 CCDC88BA6NC98 1476 aa20.71■□□□□ 0.91
ARHGEF9-215ENST00000624387 PRDM2Q13029 1718 aa20.69■□□□□ 0.9
ARHGEF9-215ENST00000624387 URB2Q14146 1524 aaKnown RBP20.57■□□□□ 0.88
ARHGEF9-215ENST00000624387 ABCC8Q09428 1581 aa20.44■□□□□ 0.86
ARHGEF9-215ENST00000624387 SUPT5HO00267 1087 aaKnown RBP20.41■□□□□ 0.86
ARHGEF9-215ENST00000624387 TOPBP1Q92547 1522 aa20.41■□□□□ 0.86
ARHGEF9-215ENST00000624387 IFT140Q96RY7 1462 aa20.38■□□□□ 0.85
ARHGEF9-215ENST00000624387 DNMBPQ6XZF7 1577 aa20.38■□□□□ 0.85
ARHGEF9-215ENST00000624387 ZNF608Q9ULD9 1512 aaPredicted RBP20.27■□□□□ 0.83
ARHGEF9-215ENST00000624387 OSCARQ8IYS5 282 aa20.26■□□□□ 0.83
ARHGEF9-215ENST00000624387 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
ARHGEF9-215ENST00000624387 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
ARHGEF9-215ENST00000624387 TARBP1Q13395 1621 aaKnown RBP20.19■□□□□ 0.82
ARHGEF9-215ENST00000624387 SOGA1O94964 1423 aa20.15■□□□□ 0.82
ARHGEF9-215ENST00000624387 AQRO60306 1485 aaKnown RBP eCLIP20.14■□□□□ 0.81
ARHGEF9-215ENST00000624387 FGD5Q6ZNL6 1462 aa20.13■□□□□ 0.81
ARHGEF9-215ENST00000624387 CUX1P39880 1505 aa20.12■□□□□ 0.81
ARHGEF9-215ENST00000624387 RAD54L2Q9Y4B4 1467 aa20.12■□□□□ 0.81
ARHGEF9-215ENST00000624387 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
ARHGEF9-215ENST00000624387 WDR97A6NE52 1622 aa20.06■□□□□ 0.8
ARHGEF9-215ENST00000624387 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
ARHGEF9-215ENST00000624387 FBLN2P98095 1184 aa20.04■□□□□ 0.8
ARHGEF9-215ENST00000624387 CHD1O14646 1710 aa20.02■□□□□ 0.8
ARHGEF9-215ENST00000624387 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
ARHGEF9-215ENST00000624387 GRIN2BQ13224 1484 aa19.95■□□□□ 0.78
ARHGEF9-215ENST00000624387 RIMBP3CA6NJZ7 1639 aa19.94■□□□□ 0.78
ARHGEF9-215ENST00000624387 RIMBP3BA6NNM3 1639 aa19.94■□□□□ 0.78
ARHGEF9-215ENST00000624387 RIMBP3Q9UFD9 1639 aa19.94■□□□□ 0.78
ARHGEF9-215ENST00000624387 WRNQ14191 1432 aaPredicted RBP eCLIP19.93■□□□□ 0.78
ARHGEF9-215ENST00000624387 MAGI1Q96QZ7 1491 aaPredicted RBP19.93■□□□□ 0.78
ARHGEF9-215ENST00000624387 CHMP7Q8WUX9 453 aaPredicted RBP19.92■□□□□ 0.78
ARHGEF9-215ENST00000624387 GAPVD1Q14C86 1478 aa19.92■□□□□ 0.78
ARHGEF9-215ENST00000624387 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
ARHGEF9-215ENST00000624387 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
ARHGEF9-215ENST00000624387 PBRM1Q86U86 1689 aa19.91■□□□□ 0.78
ARHGEF9-215ENST00000624387 ARHGEF11O15085 1522 aa19.9■□□□□ 0.78
ARHGEF9-215ENST00000624387 BIVM-ERCC5R4GMW8 1640 aa19.9■□□□□ 0.78
ARHGEF9-215ENST00000624387 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
ARHGEF9-215ENST00000624387 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
ARHGEF9-215ENST00000624387 ABCA5Q8WWZ7 1642 aa19.85■□□□□ 0.77
ARHGEF9-215ENST00000624387 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
ARHGEF9-215ENST00000624387 CYB5RLQ6IPT4 315 aa19.76■□□□□ 0.75
ARHGEF9-215ENST00000624387 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
ARHGEF9-215ENST00000624387 ARAP1Q96P48 1450 aa19.69■□□□□ 0.74
ARHGEF9-215ENST00000624387 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
ARHGEF9-215ENST00000624387 GRIN2AQ12879 1464 aa19.68■□□□□ 0.74
ARHGEF9-215ENST00000624387 FHAD1B1AJZ9 1412 aa19.68■□□□□ 0.74
ARHGEF9-215ENST00000624387 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
ARHGEF9-215ENST00000624387 NUP160Q12769 1436 aa19.58■□□□□ 0.72
ARHGEF9-215ENST00000624387 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
ARHGEF9-215ENST00000624387 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
ARHGEF9-215ENST00000624387 CUL7Q14999 1698 aa19.49■□□□□ 0.71
ARHGEF9-215ENST00000624387 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
ARHGEF9-215ENST00000624387 IGF1RP08069 1367 aa19.45■□□□□ 0.7
ARHGEF9-215ENST00000624387 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
ARHGEF9-215ENST00000624387 JPH4Q96JJ6 628 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms