RNA–Protein interactions for RNA: ENST00000624113.1

LINC01669-204, Transcript of long intergenic non-protein coding RNA 1669, humanhuman

TSL 3

Gene LINC01669, Length 233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01669-204ENST00000624113 NISCHQ9Y2I1 1504 aa30.53■■■□□ 2.48
LINC01669-204ENST00000624113 CCDC180Q9P1Z9 1646 aa27.19■■□□□ 1.94
LINC01669-204ENST00000624113 ABCC9O60706 1549 aa26.74■■□□□ 1.87
LINC01669-204ENST00000624113 RB1CC1Q8TDY2 1594 aa25.71■■□□□ 1.71
LINC01669-204ENST00000624113 NACADO15069 1562 aa25.66■■□□□ 1.7
LINC01669-204ENST00000624113 DCAF8L2P0C7V8 631 aa25.58■■□□□ 1.69
LINC01669-204ENST00000624113 MYO15BQ96JP2 1530 aa25.51■■□□□ 1.67
LINC01669-204ENST00000624113 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
LINC01669-204ENST00000624113 DCAF1Q9Y4B6 1507 aa25.32■■□□□ 1.64
LINC01669-204ENST00000624113 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
LINC01669-204ENST00000624113 UNC13AQ9UPW8 1703 aa24.89■■□□□ 1.57
LINC01669-204ENST00000624113 BICRAQ9NZM4 1560 aa24.83■■□□□ 1.57
LINC01669-204ENST00000624113 SHROOM4Q9ULL8 1493 aa24.78■■□□□ 1.56
LINC01669-204ENST00000624113 SCRIBQ14160 1630 aa24.76■■□□□ 1.55
LINC01669-204ENST00000624113 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
LINC01669-204ENST00000624113 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
LINC01669-204ENST00000624113 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
LINC01669-204ENST00000624113 CECR2Q9BXF3 1484 aa24.09■■□□□ 1.45
LINC01669-204ENST00000624113 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
LINC01669-204ENST00000624113 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
LINC01669-204ENST00000624113 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
LINC01669-204ENST00000624113 SMARCA2P51531 1590 aa23.65■■□□□ 1.38
LINC01669-204ENST00000624113 ATAD2BQ9ULI0 1458 aa23.64■■□□□ 1.38
LINC01669-204ENST00000624113 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
LINC01669-204ENST00000624113 PEG3Q9GZU2 1588 aa23.51■■□□□ 1.35
LINC01669-204ENST00000624113 BAZ1BQ9UIG0 1483 aaKnown RBP23.48■■□□□ 1.35
LINC01669-204ENST00000624113 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
LINC01669-204ENST00000624113 RSF1Q96T23 1441 aaPredicted RBP23.21■■□□□ 1.31
LINC01669-204ENST00000624113 WIZO95785 1651 aa23.16■■□□□ 1.3
LINC01669-204ENST00000624113 ERCC6Q03468 1493 aa23.15■■□□□ 1.3
LINC01669-204ENST00000624113 LAMC3Q9Y6N6 1575 aa23.06■■□□□ 1.28
LINC01669-204ENST00000624113 NESP48681 1621 aa23.05■■□□□ 1.28
LINC01669-204ENST00000624113 TOP2AP11388 1531 aaKnown RBP23.03■■□□□ 1.28
LINC01669-204ENST00000624113 CADPSQ9ULU8 1353 aa23■■□□□ 1.27
LINC01669-204ENST00000624113 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
LINC01669-204ENST00000624113 CUX2O14529 1486 aa22.97■■□□□ 1.27
LINC01669-204ENST00000624113 CFTRP13569 1480 aa22.81■■□□□ 1.24
LINC01669-204ENST00000624113 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
LINC01669-204ENST00000624113 CCDC88BA6NC98 1476 aa22.72■■□□□ 1.23
LINC01669-204ENST00000624113 CEP164Q9UPV0 1460 aa22.72■■□□□ 1.23
LINC01669-204ENST00000624113 KIF21AQ7Z4S6 1674 aa22.71■■□□□ 1.23
LINC01669-204ENST00000624113 FANCD2Q9BXW9 1451 aa22.71■■□□□ 1.23
LINC01669-204ENST00000624113 MRC2Q9UBG0 1479 aa22.71■■□□□ 1.23
LINC01669-204ENST00000624113 WDR62O43379 1518 aa22.62■■□□□ 1.21
LINC01669-204ENST00000624113 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
LINC01669-204ENST00000624113 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
LINC01669-204ENST00000624113 URB2Q14146 1524 aaKnown RBP22.43■■□□□ 1.18
LINC01669-204ENST00000624113 DNAJC5Q9H3Z4 198 aa22.4■■□□□ 1.18
LINC01669-204ENST00000624113 ABCC8Q09428 1581 aa22.39■■□□□ 1.18
LINC01669-204ENST00000624113 TOPBP1Q92547 1522 aa22.3■■□□□ 1.16
LINC01669-204ENST00000624113 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
LINC01669-204ENST00000624113 IFT140Q96RY7 1462 aa22.27■■□□□ 1.16
LINC01669-204ENST00000624113 POLA1P09884 1462 aaPredicted RBP22.1■■□□□ 1.13
LINC01669-204ENST00000624113 ZNF608Q9ULD9 1512 aaPredicted RBP22.07■■□□□ 1.12
LINC01669-204ENST00000624113 SOGA1O94964 1423 aa22.05■■□□□ 1.12
LINC01669-204ENST00000624113 CUX1P39880 1505 aa22.04■■□□□ 1.12
LINC01669-204ENST00000624113 FGD5Q6ZNL6 1462 aa22.03■■□□□ 1.12
LINC01669-204ENST00000624113 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
LINC01669-204ENST00000624113 OSCARQ8IYS5 282 aa22■■□□□ 1.11
LINC01669-204ENST00000624113 EIF4G3O43432 1585 aaKnown RBP21.99■■□□□ 1.11
LINC01669-204ENST00000624113 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
LINC01669-204ENST00000624113 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
LINC01669-204ENST00000624113 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.1
LINC01669-204ENST00000624113 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
LINC01669-204ENST00000624113 TDRD9Q8NDG6 1382 aaKnown RBP21.91■■□□□ 1.1
LINC01669-204ENST00000624113 ABCA10Q8WWZ4 1543 aa21.84■■□□□ 1.09
LINC01669-204ENST00000624113 TOP2BQ02880 1626 aa21.84■■□□□ 1.09
LINC01669-204ENST00000624113 GRIN2BQ13224 1484 aa21.83■■□□□ 1.08
LINC01669-204ENST00000624113 MAGI1Q96QZ7 1491 aaPredicted RBP21.8■■□□□ 1.08
LINC01669-204ENST00000624113 BIVM-ERCC5R4GMW8 1640 aa21.8■■□□□ 1.08
LINC01669-204ENST00000624113 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
LINC01669-204ENST00000624113 SYNJ1O43426 1573 aa21.78■■□□□ 1.08
LINC01669-204ENST00000624113 SNAPC4Q5SXM2 1469 aa21.77■■□□□ 1.08
LINC01669-204ENST00000624113 FBLN2P98095 1184 aa21.77■■□□□ 1.08
LINC01669-204ENST00000624113 CHMP7Q8WUX9 453 aaPredicted RBP21.73■■□□□ 1.07
LINC01669-204ENST00000624113 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
LINC01669-204ENST00000624113 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
LINC01669-204ENST00000624113 CHD1O14646 1710 aa21.66■■□□□ 1.06
LINC01669-204ENST00000624113 PBRM1Q86U86 1689 aa21.63■■□□□ 1.05
LINC01669-204ENST00000624113 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
LINC01669-204ENST00000624113 TRIM41Q8WV44 630 aa21.57■■□□□ 1.04
LINC01669-204ENST00000624113 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
LINC01669-204ENST00000624113 ARHGEF11O15085 1522 aa21.56■■□□□ 1.04
LINC01669-204ENST00000624113 ADAMTS12P58397 1594 aa21.53■■□□□ 1.04
LINC01669-204ENST00000624113 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
LINC01669-204ENST00000624113 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
LINC01669-204ENST00000624113 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
LINC01669-204ENST00000624113 CLASP1Q7Z460 1538 aa21.52■■□□□ 1.04
LINC01669-204ENST00000624113 KIF27Q86VH2 1401 aa21.52■■□□□ 1.04
LINC01669-204ENST00000624113 GRIN2AQ12879 1464 aa21.52■■□□□ 1.03
LINC01669-204ENST00000624113 NUP160Q12769 1436 aa21.44■■□□□ 1.02
LINC01669-204ENST00000624113 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
LINC01669-204ENST00000624113 IGF1RP08069 1367 aa21.38■■□□□ 1.01
LINC01669-204ENST00000624113 ARAP1Q96P48 1450 aa21.37■■□□□ 1.01
LINC01669-204ENST00000624113 CEP170Q5SW79 1584 aa21.35■■□□□ 1.01
LINC01669-204ENST00000624113 CUL7Q14999 1698 aa21.33■■□□□ 1
LINC01669-204ENST00000624113 CARMIL1Q5VZK9 1371 aa21.28■■□□□ 1
LINC01669-204ENST00000624113 SHROOM2Q13796 1616 aa21.22■□□□□ 0.99
LINC01669-204ENST00000624113 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
LINC01669-204ENST00000624113 RUSC2Q8N2Y8 1516 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms