RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 NISCHQ9Y2I1 1504 aa45.42■■■■■ 4.86
PCDHB5-202ENST00000623915 ABCC9O60706 1549 aa40.82■■■■■ 4.12
PCDHB5-202ENST00000623915 CCDC180Q9P1Z9 1646 aa40.81■■■■■ 4.12
PCDHB5-202ENST00000623915 RB1CC1Q8TDY2 1594 aa38.82■■■■□ 3.81
PCDHB5-202ENST00000623915 NACADO15069 1562 aa38.56■■■■□ 3.76
PCDHB5-202ENST00000623915 DNAJC5BQ9UF47 199 aa38.37■■■■□ 3.73
PCDHB5-202ENST00000623915 DCAF8L2P0C7V8 631 aa38.17■■■■□ 3.7
PCDHB5-202ENST00000623915 MYO15BQ96JP2 1530 aa38.05■■■■□ 3.68
PCDHB5-202ENST00000623915 UNC13AQ9UPW8 1703 aa38.02■■■■□ 3.68
PCDHB5-202ENST00000623915 PABPN1Q86U42 306 aaKnown RBP eCLIP37.95■■■■□ 3.67
PCDHB5-202ENST00000623915 BICRAQ9NZM4 1560 aa37.79■■■■□ 3.64
PCDHB5-202ENST00000623915 ZCCHC6Q5VYS8 1495 aaKnown RBP37.67■■■■□ 3.62
PCDHB5-202ENST00000623915 DCAF1Q9Y4B6 1507 aa37.54■■■■□ 3.6
PCDHB5-202ENST00000623915 SHROOM4Q9ULL8 1493 aa37.24■■■■□ 3.55
PCDHB5-202ENST00000623915 SCRIBQ14160 1630 aa37.16■■■■□ 3.54
PCDHB5-202ENST00000623915 CC2D2AQ9P2K1 1620 aa36.9■■■■□ 3.5
PCDHB5-202ENST00000623915 EIF4G1Q04637 1599 aaKnown RBP36.82■■■■□ 3.48
PCDHB5-202ENST00000623915 CECR2Q9BXF3 1484 aa36.78■■■■□ 3.48
PCDHB5-202ENST00000623915 NCAPD3P42695 1498 aa35.6■■■■□ 3.29
PCDHB5-202ENST00000623915 ATAD2BQ9ULI0 1458 aa35.5■■■■□ 3.27
PCDHB5-202ENST00000623915 SMARCA4P51532 1647 aa35.46■■■■□ 3.27
PCDHB5-202ENST00000623915 SMARCA2P51531 1590 aa35.37■■■■□ 3.25
PCDHB5-202ENST00000623915 HMGXB3Q12766 1538 aa35.37■■■■□ 3.25
PCDHB5-202ENST00000623915 BAZ1AQ9NRL2 1556 aaPredicted RBP35.25■■■■□ 3.23
PCDHB5-202ENST00000623915 DNAJC5Q9H3Z4 198 aa35.22■■■■□ 3.23
PCDHB5-202ENST00000623915 CUX2O14529 1486 aa35.22■■■■□ 3.23
PCDHB5-202ENST00000623915 ERCC6Q03468 1493 aa35.2■■■■□ 3.23
PCDHB5-202ENST00000623915 PEG3Q9GZU2 1588 aa35.15■■■■□ 3.22
PCDHB5-202ENST00000623915 BAZ1BQ9UIG0 1483 aaKnown RBP35.12■■■■□ 3.21
PCDHB5-202ENST00000623915 NESP48681 1621 aa35.08■■■■□ 3.21
PCDHB5-202ENST00000623915 MROH2BQ7Z745 1585 aa35.01■■■■□ 3.2
PCDHB5-202ENST00000623915 LAMC3Q9Y6N6 1575 aa34.81■■■■□ 3.16
PCDHB5-202ENST00000623915 THOC2Q8NI27 1593 aaKnown RBP34.79■■■■□ 3.16
PCDHB5-202ENST00000623915 KIF21AQ7Z4S6 1674 aa34.64■■■■□ 3.14
PCDHB5-202ENST00000623915 WIZO95785 1651 aa34.58■■■■□ 3.13
PCDHB5-202ENST00000623915 PDS5BQ9NTI5 1447 aa34.55■■■■□ 3.12
PCDHB5-202ENST00000623915 CADPSQ9ULU8 1353 aa34.49■■■■□ 3.11
PCDHB5-202ENST00000623915 MRC2Q9UBG0 1479 aa34.32■■■■□ 3.08
PCDHB5-202ENST00000623915 WDR62O43379 1518 aa34.27■■■■□ 3.08
PCDHB5-202ENST00000623915 RSF1Q96T23 1441 aaPredicted RBP34.25■■■■□ 3.07
PCDHB5-202ENST00000623915 CEP164Q9UPV0 1460 aa34.15■■■■□ 3.06
PCDHB5-202ENST00000623915 TOP2AP11388 1531 aaKnown RBP34.14■■■■□ 3.06
PCDHB5-202ENST00000623915 CFTRP13569 1480 aa34.13■■■■□ 3.05
PCDHB5-202ENST00000623915 FANCD2Q9BXW9 1451 aa34.12■■■■□ 3.05
PCDHB5-202ENST00000623915 URB2Q14146 1524 aaKnown RBP33.89■■■■□ 3.02
PCDHB5-202ENST00000623915 PRDM2Q13029 1718 aa33.79■■■■□ 3
PCDHB5-202ENST00000623915 CCDC88BA6NC98 1476 aa33.74■■■□□ 2.99
PCDHB5-202ENST00000623915 TRIM41Q8WV44 630 aa33.59■■■□□ 2.97
PCDHB5-202ENST00000623915 OSCARQ8IYS5 282 aa33.5■■■□□ 2.95
PCDHB5-202ENST00000623915 TOPBP1Q92547 1522 aa33.48■■■□□ 2.95
PCDHB5-202ENST00000623915 IFT140Q96RY7 1462 aa33.47■■■□□ 2.95
PCDHB5-202ENST00000623915 ZNF608Q9ULD9 1512 aaPredicted RBP33.47■■■□□ 2.95
PCDHB5-202ENST00000623915 DNMBPQ6XZF7 1577 aa33.36■■■□□ 2.93
PCDHB5-202ENST00000623915 ABCC8Q09428 1581 aa33.34■■■□□ 2.93
PCDHB5-202ENST00000623915 EIF4G3O43432 1585 aaKnown RBP33.29■■■□□ 2.92
PCDHB5-202ENST00000623915 TARBP1Q13395 1621 aaKnown RBP33.23■■■□□ 2.91
PCDHB5-202ENST00000623915 RIMBP3CA6NJZ7 1639 aa33.19■■■□□ 2.9
PCDHB5-202ENST00000623915 RIMBP3BA6NNM3 1639 aa33.19■■■□□ 2.9
PCDHB5-202ENST00000623915 RIMBP3Q9UFD9 1639 aa33.19■■■□□ 2.9
PCDHB5-202ENST00000623915 POLA1P09884 1462 aaPredicted RBP33.14■■■□□ 2.9
PCDHB5-202ENST00000623915 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.89
PCDHB5-202ENST00000623915 ARHGEF11O15085 1522 aa33.07■■■□□ 2.89
PCDHB5-202ENST00000623915 CHD1O14646 1710 aa33.04■■■□□ 2.88
PCDHB5-202ENST00000623915 RAD54L2Q9Y4B4 1467 aa33■■■□□ 2.87
PCDHB5-202ENST00000623915 SOGA1O94964 1423 aa32.93■■■□□ 2.86
PCDHB5-202ENST00000623915 FGD5Q6ZNL6 1462 aa32.92■■■□□ 2.86
PCDHB5-202ENST00000623915 SUPT5HO00267 1087 aaKnown RBP32.91■■■□□ 2.86
PCDHB5-202ENST00000623915 CUX1P39880 1505 aa32.9■■■□□ 2.86
PCDHB5-202ENST00000623915 TDRD9Q8NDG6 1382 aaKnown RBP32.88■■■□□ 2.85
PCDHB5-202ENST00000623915 WDR97A6NE52 1622 aa32.85■■■□□ 2.85
PCDHB5-202ENST00000623915 SNAPC4Q5SXM2 1469 aa32.8■■■□□ 2.84
PCDHB5-202ENST00000623915 FBLN2P98095 1184 aa32.79■■■□□ 2.84
PCDHB5-202ENST00000623915 ARAP1Q96P48 1450 aa32.77■■■□□ 2.84
PCDHB5-202ENST00000623915 CYB5RLQ6IPT4 315 aa32.72■■■□□ 2.83
PCDHB5-202ENST00000623915 MAGI1Q96QZ7 1491 aaPredicted RBP32.7■■■□□ 2.83
PCDHB5-202ENST00000623915 CLASP1Q7Z460 1538 aa32.69■■■□□ 2.82
PCDHB5-202ENST00000623915 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
PCDHB5-202ENST00000623915 SYNJ1O43426 1573 aa32.59■■■□□ 2.81
PCDHB5-202ENST00000623915 SYNJ2O15056 1496 aa32.59■■■□□ 2.81
PCDHB5-202ENST00000623915 PBRM1Q86U86 1689 aa32.58■■■□□ 2.81
PCDHB5-202ENST00000623915 CHMP7Q8WUX9 453 aaPredicted RBP32.56■■■□□ 2.8
PCDHB5-202ENST00000623915 ABCA10Q8WWZ4 1543 aa32.55■■■□□ 2.8
PCDHB5-202ENST00000623915 GAPVD1Q14C86 1478 aa32.54■■■□□ 2.8
PCDHB5-202ENST00000623915 ABCA5Q8WWZ7 1642 aa32.54■■■□□ 2.8
PCDHB5-202ENST00000623915 BIVM-ERCC5R4GMW8 1640 aa32.37■■■□□ 2.77
PCDHB5-202ENST00000623915 TOP2BQ02880 1626 aa32.35■■■□□ 2.77
PCDHB5-202ENST00000623915 WRNQ14191 1432 aaPredicted RBP eCLIP32.34■■■□□ 2.77
PCDHB5-202ENST00000623915 TRHP20396 242 aaPredicted RBP32.33■■■□□ 2.77
PCDHB5-202ENST00000623915 ADAMTS12P58397 1594 aa32.29■■■□□ 2.76
PCDHB5-202ENST00000623915 GRIN2AQ12879 1464 aa32.28■■■□□ 2.76
PCDHB5-202ENST00000623915 NUP160Q12769 1436 aa32.2■■■□□ 2.75
PCDHB5-202ENST00000623915 CEP170Q5SW79 1584 aa32.19■■■□□ 2.74
PCDHB5-202ENST00000623915 ERCC6L2Q5T890 1561 aa32.18■■■□□ 2.74
PCDHB5-202ENST00000623915 FHAD1B1AJZ9 1412 aa32.14■■■□□ 2.74
PCDHB5-202ENST00000623915 ERICH3Q5RHP9 1530 aa32.13■■■□□ 2.73
PCDHB5-202ENST00000623915 SHROOM2Q13796 1616 aa32.09■■■□□ 2.73
PCDHB5-202ENST00000623915 RUSC2Q8N2Y8 1516 aa31.85■■■□□ 2.69
PCDHB5-202ENST00000623915 PRG4Q92954 1404 aaPredicted RBP31.83■■■□□ 2.69
PCDHB5-202ENST00000623915 JPH4Q96JJ6 628 aa31.76■■■□□ 2.67
PCDHB5-202ENST00000623915 IGF1RP08069 1367 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 277.8 ms