RNA–Protein interactions for RNA: ENST00000623566.3

ARHGEF9-211, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 3

Gene ARHGEF9, Length 584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-211ENST00000623566 NISCHQ9Y2I1 1504 aa37.91■■■■□ 3.66
ARHGEF9-211ENST00000623566 CCDC180Q9P1Z9 1646 aa33.86■■■■□ 3.01
ARHGEF9-211ENST00000623566 ABCC9O60706 1549 aa33.66■■■□□ 2.98
ARHGEF9-211ENST00000623566 RB1CC1Q8TDY2 1594 aa32.09■■■□□ 2.73
ARHGEF9-211ENST00000623566 DCAF8L2P0C7V8 631 aa31.95■■■□□ 2.71
ARHGEF9-211ENST00000623566 NACADO15069 1562 aa31.91■■■□□ 2.7
ARHGEF9-211ENST00000623566 MYO15BQ96JP2 1530 aa31.51■■■□□ 2.63
ARHGEF9-211ENST00000623566 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
ARHGEF9-211ENST00000623566 UNC13AQ9UPW8 1703 aa31.44■■■□□ 2.62
ARHGEF9-211ENST00000623566 PABPN1Q86U42 306 aaKnown RBP eCLIP31.4■■■□□ 2.62
ARHGEF9-211ENST00000623566 DNAJC5BQ9UF47 199 aa31.27■■■□□ 2.6
ARHGEF9-211ENST00000623566 DCAF1Q9Y4B6 1507 aa31.24■■■□□ 2.59
ARHGEF9-211ENST00000623566 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
ARHGEF9-211ENST00000623566 SCRIBQ14160 1630 aa31■■■□□ 2.55
ARHGEF9-211ENST00000623566 SHROOM4Q9ULL8 1493 aa30.66■■■□□ 2.5
ARHGEF9-211ENST00000623566 CC2D2AQ9P2K1 1620 aa30.39■■■□□ 2.46
ARHGEF9-211ENST00000623566 EIF4G1Q04637 1599 aaKnown RBP30.38■■■□□ 2.45
ARHGEF9-211ENST00000623566 CECR2Q9BXF3 1484 aa30.24■■■□□ 2.43
ARHGEF9-211ENST00000623566 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
ARHGEF9-211ENST00000623566 NCAPD3P42695 1498 aa29.45■■■□□ 2.31
ARHGEF9-211ENST00000623566 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
ARHGEF9-211ENST00000623566 BAZ1AQ9NRL2 1556 aaPredicted RBP29.39■■■□□ 2.3
ARHGEF9-211ENST00000623566 SMARCA2P51531 1590 aa29.37■■■□□ 2.29
ARHGEF9-211ENST00000623566 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
ARHGEF9-211ENST00000623566 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.28
ARHGEF9-211ENST00000623566 BAZ1BQ9UIG0 1483 aaKnown RBP29.22■■■□□ 2.27
ARHGEF9-211ENST00000623566 PEG3Q9GZU2 1588 aa29.18■■■□□ 2.26
ARHGEF9-211ENST00000623566 ERCC6Q03468 1493 aa29.02■■■□□ 2.24
ARHGEF9-211ENST00000623566 NESP48681 1621 aa29.02■■■□□ 2.24
ARHGEF9-211ENST00000623566 WIZO95785 1651 aa28.95■■■□□ 2.22
ARHGEF9-211ENST00000623566 CUX2O14529 1486 aa28.78■■■□□ 2.2
ARHGEF9-211ENST00000623566 LAMC3Q9Y6N6 1575 aa28.76■■■□□ 2.19
ARHGEF9-211ENST00000623566 RSF1Q96T23 1441 aaPredicted RBP28.74■■■□□ 2.19
ARHGEF9-211ENST00000623566 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.18
ARHGEF9-211ENST00000623566 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
ARHGEF9-211ENST00000623566 CADPSQ9ULU8 1353 aa28.59■■■□□ 2.17
ARHGEF9-211ENST00000623566 PDS5BQ9NTI5 1447 aa28.57■■■□□ 2.16
ARHGEF9-211ENST00000623566 TOP2AP11388 1531 aaKnown RBP28.56■■■□□ 2.16
ARHGEF9-211ENST00000623566 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
ARHGEF9-211ENST00000623566 MRC2Q9UBG0 1479 aa28.35■■■□□ 2.13
ARHGEF9-211ENST00000623566 CFTRP13569 1480 aa28.34■■■□□ 2.13
ARHGEF9-211ENST00000623566 FANCD2Q9BXW9 1451 aa28.32■■■□□ 2.12
ARHGEF9-211ENST00000623566 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
ARHGEF9-211ENST00000623566 WDR62O43379 1518 aa28.27■■■□□ 2.12
ARHGEF9-211ENST00000623566 CCDC88BA6NC98 1476 aa28.23■■■□□ 2.11
ARHGEF9-211ENST00000623566 PRDM2Q13029 1718 aa28.11■■■□□ 2.09
ARHGEF9-211ENST00000623566 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
ARHGEF9-211ENST00000623566 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
ARHGEF9-211ENST00000623566 SUPT5HO00267 1087 aaKnown RBP27.79■■■□□ 2.04
ARHGEF9-211ENST00000623566 DNMBPQ6XZF7 1577 aa27.73■■■□□ 2.03
ARHGEF9-211ENST00000623566 ZNF608Q9ULD9 1512 aaPredicted RBP27.71■■■□□ 2.03
ARHGEF9-211ENST00000623566 IFT140Q96RY7 1462 aa27.7■■■□□ 2.03
ARHGEF9-211ENST00000623566 ABCC8Q09428 1581 aa27.68■■■□□ 2.02
ARHGEF9-211ENST00000623566 EIF4G3O43432 1585 aaKnown RBP27.56■■■□□ 2
ARHGEF9-211ENST00000623566 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
ARHGEF9-211ENST00000623566 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
ARHGEF9-211ENST00000623566 OSCARQ8IYS5 282 aa27.51■■□□□ 1.99
ARHGEF9-211ENST00000623566 RAD54L2Q9Y4B4 1467 aa27.49■■□□□ 1.99
ARHGEF9-211ENST00000623566 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.99
ARHGEF9-211ENST00000623566 CUX1P39880 1505 aa27.47■■□□□ 1.99
ARHGEF9-211ENST00000623566 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
ARHGEF9-211ENST00000623566 SOGA1O94964 1423 aa27.41■■□□□ 1.98
ARHGEF9-211ENST00000623566 TRIM41Q8WV44 630 aa27.41■■□□□ 1.98
ARHGEF9-211ENST00000623566 TDRD9Q8NDG6 1382 aaKnown RBP27.36■■□□□ 1.97
ARHGEF9-211ENST00000623566 CHD1O14646 1710 aa27.32■■□□□ 1.96
ARHGEF9-211ENST00000623566 FBLN2P98095 1184 aa27.26■■□□□ 1.95
ARHGEF9-211ENST00000623566 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
ARHGEF9-211ENST00000623566 SNAPC4Q5SXM2 1469 aa27.22■■□□□ 1.95
ARHGEF9-211ENST00000623566 RIMBP3CA6NJZ7 1639 aa27.2■■□□□ 1.95
ARHGEF9-211ENST00000623566 RIMBP3BA6NNM3 1639 aa27.2■■□□□ 1.95
ARHGEF9-211ENST00000623566 RIMBP3Q9UFD9 1639 aa27.2■■□□□ 1.95
ARHGEF9-211ENST00000623566 ARHGEF11O15085 1522 aa27.14■■□□□ 1.94
ARHGEF9-211ENST00000623566 GRIN2BQ13224 1484 aa27.13■■□□□ 1.93
ARHGEF9-211ENST00000623566 SYNJ1O43426 1573 aa27.13■■□□□ 1.93
ARHGEF9-211ENST00000623566 WRNQ14191 1432 aaPredicted RBP eCLIP27.11■■□□□ 1.93
ARHGEF9-211ENST00000623566 PBRM1Q86U86 1689 aa27.11■■□□□ 1.93
ARHGEF9-211ENST00000623566 GAPVD1Q14C86 1478 aa27.1■■□□□ 1.93
ARHGEF9-211ENST00000623566 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
ARHGEF9-211ENST00000623566 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
ARHGEF9-211ENST00000623566 MAGI1Q96QZ7 1491 aaPredicted RBP27.09■■□□□ 1.93
ARHGEF9-211ENST00000623566 TOP2BQ02880 1626 aa27.08■■□□□ 1.93
ARHGEF9-211ENST00000623566 ABCA5Q8WWZ7 1642 aa27.07■■□□□ 1.92
ARHGEF9-211ENST00000623566 CHMP7Q8WUX9 453 aaPredicted RBP27.05■■□□□ 1.92
ARHGEF9-211ENST00000623566 SYNJ2O15056 1496 aa27■■□□□ 1.91
ARHGEF9-211ENST00000623566 CLASP1Q7Z460 1538 aa26.95■■□□□ 1.91
ARHGEF9-211ENST00000623566 CYB5RLQ6IPT4 315 aa26.91■■□□□ 1.9
ARHGEF9-211ENST00000623566 ARAP1Q96P48 1450 aa26.9■■□□□ 1.9
ARHGEF9-211ENST00000623566 ADAMTS12P58397 1594 aa26.86■■□□□ 1.89
ARHGEF9-211ENST00000623566 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
ARHGEF9-211ENST00000623566 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
ARHGEF9-211ENST00000623566 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
ARHGEF9-211ENST00000623566 CEP170Q5SW79 1584 aa26.74■■□□□ 1.87
ARHGEF9-211ENST00000623566 NUP160Q12769 1436 aa26.67■■□□□ 1.86
ARHGEF9-211ENST00000623566 ERCC6L2Q5T890 1561 aa26.64■■□□□ 1.86
ARHGEF9-211ENST00000623566 KIF27Q86VH2 1401 aa26.55■■□□□ 1.84
ARHGEF9-211ENST00000623566 TRHP20396 242 aaPredicted RBP26.54■■□□□ 1.84
ARHGEF9-211ENST00000623566 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
ARHGEF9-211ENST00000623566 IGF1RP08069 1367 aa26.49■■□□□ 1.83
ARHGEF9-211ENST00000623566 RUSC2Q8N2Y8 1516 aa26.48■■□□□ 1.83
ARHGEF9-211ENST00000623566 CUL7Q14999 1698 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms