RNA–Protein interactions for RNA: ENST00000623170.1

RANBP6-203, Transcript of RAN binding protein 6, humanhuman

TSL 4

Gene RANBP6, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP6-203ENST00000623170 NISCHQ9Y2I1 1504 aa30.93■■■□□ 2.54
RANBP6-203ENST00000623170 CCDC180Q9P1Z9 1646 aa27.05■■□□□ 1.92
RANBP6-203ENST00000623170 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
RANBP6-203ENST00000623170 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
RANBP6-203ENST00000623170 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
RANBP6-203ENST00000623170 DCAF8L2P0C7V8 631 aa25.27■■□□□ 1.64
RANBP6-203ENST00000623170 ABCC9O60706 1549 aa25.22■■□□□ 1.63
RANBP6-203ENST00000623170 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
RANBP6-203ENST00000623170 NACADO15069 1562 aa25.1■■□□□ 1.61
RANBP6-203ENST00000623170 RB1CC1Q8TDY2 1594 aa24.85■■□□□ 1.57
RANBP6-203ENST00000623170 SCRIBQ14160 1630 aa24.72■■□□□ 1.55
RANBP6-203ENST00000623170 UNC13AQ9UPW8 1703 aa24.29■■□□□ 1.48
RANBP6-203ENST00000623170 SUPT5HO00267 1087 aaKnown RBP24.26■■□□□ 1.47
RANBP6-203ENST00000623170 BICRAQ9NZM4 1560 aa24■■□□□ 1.43
RANBP6-203ENST00000623170 RSF1Q96T23 1441 aaPredicted RBP24■■□□□ 1.43
RANBP6-203ENST00000623170 BAZ1AQ9NRL2 1556 aaPredicted RBP23.93■■□□□ 1.42
RANBP6-203ENST00000623170 CECR2Q9BXF3 1484 aa23.91■■□□□ 1.42
RANBP6-203ENST00000623170 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
RANBP6-203ENST00000623170 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
RANBP6-203ENST00000623170 PABPN1Q86U42 306 aaKnown RBP eCLIP23.7■■□□□ 1.38
RANBP6-203ENST00000623170 WIZO95785 1651 aa23.66■■□□□ 1.38
RANBP6-203ENST00000623170 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
RANBP6-203ENST00000623170 PEG3Q9GZU2 1588 aa23.52■■□□□ 1.36
RANBP6-203ENST00000623170 SMARCA2P51531 1590 aa23.39■■□□□ 1.33
RANBP6-203ENST00000623170 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
RANBP6-203ENST00000623170 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
RANBP6-203ENST00000623170 EIF4G1Q04637 1599 aaKnown RBP23.29■■□□□ 1.32
RANBP6-203ENST00000623170 BAZ1BQ9UIG0 1483 aaKnown RBP23.21■■□□□ 1.31
RANBP6-203ENST00000623170 CCDC88BA6NC98 1476 aa23.17■■□□□ 1.3
RANBP6-203ENST00000623170 HMGXB3Q12766 1538 aa23.16■■□□□ 1.3
RANBP6-203ENST00000623170 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
RANBP6-203ENST00000623170 CC2D2AQ9P2K1 1620 aa22.89■■□□□ 1.25
RANBP6-203ENST00000623170 TRIM41Q8WV44 630 aa22.88■■□□□ 1.25
RANBP6-203ENST00000623170 ABCC8Q09428 1581 aa22.72■■□□□ 1.23
RANBP6-203ENST00000623170 PRDM2Q13029 1718 aa22.65■■□□□ 1.22
RANBP6-203ENST00000623170 CFTRP13569 1480 aa22.62■■□□□ 1.21
RANBP6-203ENST00000623170 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
RANBP6-203ENST00000623170 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
RANBP6-203ENST00000623170 EEA1Q15075 1411 aa22.49■■□□□ 1.19
RANBP6-203ENST00000623170 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
RANBP6-203ENST00000623170 BIVM-ERCC5R4GMW8 1640 aa22.48■■□□□ 1.19
RANBP6-203ENST00000623170 TOP2BQ02880 1626 aa22.47■■□□□ 1.19
RANBP6-203ENST00000623170 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
RANBP6-203ENST00000623170 LOC105371045A0A1W2PR82 267 aa22.35■■□□□ 1.17
RANBP6-203ENST00000623170 FAM9AQ8IZU1 332 aaPredicted RBP22.35■■□□□ 1.17
RANBP6-203ENST00000623170 CUX1P39880 1505 aa22.31■■□□□ 1.16
RANBP6-203ENST00000623170 SOGA1O94964 1423 aa22.29■■□□□ 1.16
RANBP6-203ENST00000623170 FANCD2Q9BXW9 1451 aa22.25■■□□□ 1.15
RANBP6-203ENST00000623170 CSRNP3Q8WYN3 585 aa22.18■■□□□ 1.14
RANBP6-203ENST00000623170 KIF21BO75037 1637 aa22.17■■□□□ 1.14
RANBP6-203ENST00000623170 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
RANBP6-203ENST00000623170 NESP48681 1621 aa22.16■■□□□ 1.14
RANBP6-203ENST00000623170 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
RANBP6-203ENST00000623170 CEP164Q9UPV0 1460 aa22.14■■□□□ 1.13
RANBP6-203ENST00000623170 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.13
RANBP6-203ENST00000623170 GOLGA3Q08378 1498 aa22.12■■□□□ 1.13
RANBP6-203ENST00000623170 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
RANBP6-203ENST00000623170 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
RANBP6-203ENST00000623170 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
RANBP6-203ENST00000623170 TOPBP1Q92547 1522 aa22.04■■□□□ 1.12
RANBP6-203ENST00000623170 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
RANBP6-203ENST00000623170 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
RANBP6-203ENST00000623170 DNAJC5BQ9UF47 199 aa21.98■■□□□ 1.11
RANBP6-203ENST00000623170 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
RANBP6-203ENST00000623170 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
RANBP6-203ENST00000623170 CUX2O14529 1486 aa21.93■■□□□ 1.1
RANBP6-203ENST00000623170 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
RANBP6-203ENST00000623170 POLA1P09884 1462 aaPredicted RBP21.92■■□□□ 1.1
RANBP6-203ENST00000623170 CEP162Q5TB80 1403 aa21.91■■□□□ 1.1
RANBP6-203ENST00000623170 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
RANBP6-203ENST00000623170 UBTFP17480 764 aaKnown RBP21.87■■□□□ 1.09
RANBP6-203ENST00000623170 RAPGEF2Q9Y4G8 1499 aa21.87■■□□□ 1.09
RANBP6-203ENST00000623170 WDR97A6NE52 1622 aa21.86■■□□□ 1.09
RANBP6-203ENST00000623170 MRC2Q9UBG0 1479 aa21.85■■□□□ 1.09
RANBP6-203ENST00000623170 RAD54L2Q9Y4B4 1467 aa21.77■■□□□ 1.08
RANBP6-203ENST00000623170 CUL7Q14999 1698 aa21.76■■□□□ 1.07
RANBP6-203ENST00000623170 IGF1RP08069 1367 aa21.75■■□□□ 1.07
RANBP6-203ENST00000623170 WDR62O43379 1518 aa21.74■■□□□ 1.07
RANBP6-203ENST00000623170 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
RANBP6-203ENST00000623170 CLIP1P30622 1438 aa21.72■■□□□ 1.07
RANBP6-203ENST00000623170 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
RANBP6-203ENST00000623170 CARMIL1Q5VZK9 1371 aa21.69■■□□□ 1.06
RANBP6-203ENST00000623170 ERCC6Q03468 1493 aa21.67■■□□□ 1.06
RANBP6-203ENST00000623170 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
RANBP6-203ENST00000623170 THOC2Q8NI27 1593 aaKnown RBP21.62■■□□□ 1.05
RANBP6-203ENST00000623170 TRIM26Q12899 539 aaPredicted RBP21.62■■□□□ 1.05
RANBP6-203ENST00000623170 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
RANBP6-203ENST00000623170 VPS8Q8N3P4 1428 aa21.58■■□□□ 1.05
RANBP6-203ENST00000623170 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
RANBP6-203ENST00000623170 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
RANBP6-203ENST00000623170 PCGF6Q9BYE7 350 aa21.53■■□□□ 1.04
RANBP6-203ENST00000623170 CTTNBP2Q8WZ74 1663 aa21.52■■□□□ 1.04
RANBP6-203ENST00000623170 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
RANBP6-203ENST00000623170 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
RANBP6-203ENST00000623170 ADAMTS12P58397 1594 aa21.45■■□□□ 1.02
RANBP6-203ENST00000623170 ARHGAP35Q9NRY4 1499 aa21.44■■□□□ 1.02
RANBP6-203ENST00000623170 FHAD1B1AJZ9 1412 aa21.43■■□□□ 1.02
RANBP6-203ENST00000623170 EFCAB5A4FU69 1503 aa21.43■■□□□ 1.02
RANBP6-203ENST00000623170 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
RANBP6-203ENST00000623170 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms