RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 NISCHQ9Y2I1 1504 aa39.69■■■■□ 3.94
DDB2-216ENST00000622878 CCDC180Q9P1Z9 1646 aa35.46■■■■□ 3.27
DDB2-216ENST00000622878 ABCC9O60706 1549 aa35.01■■■■□ 3.2
DDB2-216ENST00000622878 RB1CC1Q8TDY2 1594 aa33.52■■■□□ 2.96
DDB2-216ENST00000622878 NACADO15069 1562 aa33.41■■■□□ 2.94
DDB2-216ENST00000622878 DCAF8L2P0C7V8 631 aa33.19■■■□□ 2.9
DDB2-216ENST00000622878 MYO15BQ96JP2 1530 aa33.12■■■□□ 2.89
DDB2-216ENST00000622878 ZCCHC6Q5VYS8 1495 aaKnown RBP32.98■■■□□ 2.87
DDB2-216ENST00000622878 DCAF1Q9Y4B6 1507 aa32.84■■■□□ 2.85
DDB2-216ENST00000622878 UNC13AQ9UPW8 1703 aa32.83■■■□□ 2.85
DDB2-216ENST00000622878 PABPN1Q86U42 306 aaKnown RBP eCLIP32.65■■■□□ 2.82
DDB2-216ENST00000622878 BICRAQ9NZM4 1560 aa32.6■■■□□ 2.81
DDB2-216ENST00000622878 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
DDB2-216ENST00000622878 SCRIBQ14160 1630 aa32.28■■■□□ 2.76
DDB2-216ENST00000622878 SHROOM4Q9ULL8 1493 aa32.18■■■□□ 2.74
DDB2-216ENST00000622878 EIF4G1Q04637 1599 aaKnown RBP31.73■■■□□ 2.67
DDB2-216ENST00000622878 CC2D2AQ9P2K1 1620 aa31.69■■■□□ 2.66
DDB2-216ENST00000622878 CECR2Q9BXF3 1484 aa31.51■■■□□ 2.63
DDB2-216ENST00000622878 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
DDB2-216ENST00000622878 NCAPD3P42695 1498 aa30.86■■■□□ 2.53
DDB2-216ENST00000622878 ATAD2BQ9ULI0 1458 aa30.81■■■□□ 2.52
DDB2-216ENST00000622878 BAZ1AQ9NRL2 1556 aaPredicted RBP30.76■■■□□ 2.52
DDB2-216ENST00000622878 SMARCA2P51531 1590 aa30.72■■■□□ 2.51
DDB2-216ENST00000622878 HMGXB3Q12766 1538 aa30.65■■■□□ 2.5
DDB2-216ENST00000622878 PEG3Q9GZU2 1588 aa30.62■■■□□ 2.49
DDB2-216ENST00000622878 MROH2BQ7Z745 1585 aa30.58■■■□□ 2.49
DDB2-216ENST00000622878 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
DDB2-216ENST00000622878 WIZO95785 1651 aa30.23■■■□□ 2.43
DDB2-216ENST00000622878 NESP48681 1621 aa30.22■■■□□ 2.43
DDB2-216ENST00000622878 ERCC6Q03468 1493 aa30.17■■■□□ 2.42
DDB2-216ENST00000622878 RSF1Q96T23 1441 aaPredicted RBP30.09■■■□□ 2.41
DDB2-216ENST00000622878 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
DDB2-216ENST00000622878 CUX2O14529 1486 aa30.04■■■□□ 2.4
DDB2-216ENST00000622878 CADPSQ9ULU8 1353 aa29.9■■■□□ 2.38
DDB2-216ENST00000622878 TOP2AP11388 1531 aaKnown RBP29.87■■■□□ 2.37
DDB2-216ENST00000622878 THOC2Q8NI27 1593 aaKnown RBP29.86■■■□□ 2.37
DDB2-216ENST00000622878 PDS5BQ9NTI5 1447 aa29.86■■■□□ 2.37
DDB2-216ENST00000622878 KIF21AQ7Z4S6 1674 aa29.85■■■□□ 2.37
DDB2-216ENST00000622878 CFTRP13569 1480 aa29.68■■■□□ 2.34
DDB2-216ENST00000622878 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
DDB2-216ENST00000622878 MRC2Q9UBG0 1479 aa29.59■■■□□ 2.33
DDB2-216ENST00000622878 FANCD2Q9BXW9 1451 aa29.55■■■□□ 2.32
DDB2-216ENST00000622878 WDR62O43379 1518 aa29.54■■■□□ 2.32
DDB2-216ENST00000622878 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
DDB2-216ENST00000622878 CEP164Q9UPV0 1460 aa29.54■■■□□ 2.32
DDB2-216ENST00000622878 PRDM2Q13029 1718 aa29.42■■■□□ 2.3
DDB2-216ENST00000622878 URB2Q14146 1524 aaKnown RBP29.32■■■□□ 2.28
DDB2-216ENST00000622878 TOPBP1Q92547 1522 aa29.05■■■□□ 2.24
DDB2-216ENST00000622878 ABCC8Q09428 1581 aa29.01■■■□□ 2.23
DDB2-216ENST00000622878 DNMBPQ6XZF7 1577 aa28.98■■■□□ 2.23
DDB2-216ENST00000622878 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
DDB2-216ENST00000622878 SUPT5HO00267 1087 aaKnown RBP28.94■■■□□ 2.22
DDB2-216ENST00000622878 ZNF608Q9ULD9 1512 aaPredicted RBP28.88■■■□□ 2.21
DDB2-216ENST00000622878 TARBP1Q13395 1621 aaKnown RBP28.8■■■□□ 2.2
DDB2-216ENST00000622878 POLA1P09884 1462 aaPredicted RBP28.78■■■□□ 2.2
DDB2-216ENST00000622878 EIF4G3O43432 1585 aaKnown RBP28.74■■■□□ 2.19
DDB2-216ENST00000622878 CUX1P39880 1505 aa28.71■■■□□ 2.19
DDB2-216ENST00000622878 OSCARQ8IYS5 282 aa28.7■■■□□ 2.18
DDB2-216ENST00000622878 RAD54L2Q9Y4B4 1467 aa28.66■■■□□ 2.18
DDB2-216ENST00000622878 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.183e-7■■■■■ 36.6
DDB2-216ENST00000622878 FGD5Q6ZNL6 1462 aa28.65■■■□□ 2.18
DDB2-216ENST00000622878 SOGA1O94964 1423 aa28.63■■■□□ 2.17
DDB2-216ENST00000622878 WDR97A6NE52 1622 aa28.53■■■□□ 2.16
DDB2-216ENST00000622878 TDRD9Q8NDG6 1382 aaKnown RBP28.52■■■□□ 2.16
DDB2-216ENST00000622878 CHD1O14646 1710 aa28.45■■■□□ 2.14
DDB2-216ENST00000622878 ABCA10Q8WWZ4 1543 aa28.37■■■□□ 2.13
DDB2-216ENST00000622878 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
DDB2-216ENST00000622878 SNAPC4Q5SXM2 1469 aa28.36■■■□□ 2.13
DDB2-216ENST00000622878 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
DDB2-216ENST00000622878 TOP2BQ02880 1626 aa28.36■■■□□ 2.13
DDB2-216ENST00000622878 GRIN2BQ13224 1484 aa28.35■■■□□ 2.13
DDB2-216ENST00000622878 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
DDB2-216ENST00000622878 SYNJ1O43426 1573 aa28.33■■■□□ 2.13
DDB2-216ENST00000622878 RIMBP3CA6NJZ7 1639 aa28.32■■■□□ 2.12
DDB2-216ENST00000622878 RIMBP3BA6NNM3 1639 aa28.32■■■□□ 2.12
DDB2-216ENST00000622878 RIMBP3Q9UFD9 1639 aa28.32■■■□□ 2.12
DDB2-216ENST00000622878 MAGI1Q96QZ7 1491 aaPredicted RBP28.32■■■□□ 2.12
DDB2-216ENST00000622878 ABCA5Q8WWZ7 1642 aa28.31■■■□□ 2.12
DDB2-216ENST00000622878 GAPVD1Q14C86 1478 aa28.3■■■□□ 2.12
DDB2-216ENST00000622878 FBLN2P98095 1184 aa28.3■■■□□ 2.12
DDB2-216ENST00000622878 PBRM1Q86U86 1689 aa28.29■■■□□ 2.12
DDB2-216ENST00000622878 ARHGEF11O15085 1522 aa28.27■■■□□ 2.12
DDB2-216ENST00000622878 SYNJ2O15056 1496 aa28.22■■■□□ 2.11
DDB2-216ENST00000622878 CHMP7Q8WUX9 453 aaPredicted RBP28.19■■■□□ 2.1
DDB2-216ENST00000622878 CLASP1Q7Z460 1538 aa28.16■■■□□ 2.1
DDB2-216ENST00000622878 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
DDB2-216ENST00000622878 ARAP1Q96P48 1450 aa28.02■■■□□ 2.08
DDB2-216ENST00000622878 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
DDB2-216ENST00000622878 GRIN2AQ12879 1464 aa28■■■□□ 2.07
DDB2-216ENST00000622878 CYB5RLQ6IPT4 315 aa27.99■■■□□ 2.07
DDB2-216ENST00000622878 FHAD1B1AJZ9 1412 aa27.96■■■□□ 2.07
DDB2-216ENST00000622878 NUP160Q12769 1436 aa27.91■■■□□ 2.06
DDB2-216ENST00000622878 CEP170Q5SW79 1584 aa27.9■■■□□ 2.06
DDB2-216ENST00000622878 KIF27Q86VH2 1401 aa27.77■■■□□ 2.04
DDB2-216ENST00000622878 SHROOM2Q13796 1616 aa27.77■■■□□ 2.04
DDB2-216ENST00000622878 IGF1RP08069 1367 aa27.75■■■□□ 2.03
DDB2-216ENST00000622878 ERCC6L2Q5T890 1561 aa27.74■■■□□ 2.03
DDB2-216ENST00000622878 CUL7Q14999 1698 aa27.67■■■□□ 2.02
DDB2-216ENST00000622878 RUSC2Q8N2Y8 1516 aa27.64■■■□□ 2.02
DDB2-216ENST00000622878 JPH4Q96JJ6 628 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms