RNA–Protein interactions for RNA: ENST00000622710.4

LRCOL1-206, Transcript of leucine rich colipase like 1, humanhuman

TSL 1 (best)

Gene LRCOL1, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1-206ENST00000622710 NISCHQ9Y2I1 1504 aa50.66■■■■■ 5.7
LRCOL1-206ENST00000622710 CCDC180Q9P1Z9 1646 aa45.13■■■■■ 4.82
LRCOL1-206ENST00000622710 ABCC9O60706 1549 aa44.19■■■■■ 4.67
LRCOL1-206ENST00000622710 RB1CC1Q8TDY2 1594 aa42.49■■■■■ 4.39
LRCOL1-206ENST00000622710 NACADO15069 1562 aa42.43■■■■■ 4.38
LRCOL1-206ENST00000622710 DCAF8L2P0C7V8 631 aa42.21■■■■■ 4.35
LRCOL1-206ENST00000622710 ZCCHC6Q5VYS8 1495 aaKnown RBP42.21■■■■■ 4.35
LRCOL1-206ENST00000622710 MYO15BQ96JP2 1530 aa42.16■■■■■ 4.34
LRCOL1-206ENST00000622710 DCAF1Q9Y4B6 1507 aa41.94■■■■■ 4.3
LRCOL1-206ENST00000622710 UNC13AQ9UPW8 1703 aa41.55■■■■■ 4.24
LRCOL1-206ENST00000622710 BICRAQ9NZM4 1560 aa41.24■■■■■ 4.19
LRCOL1-206ENST00000622710 PABPN1Q86U42 306 aaKnown RBP eCLIP41.22■■■■■ 4.19
LRCOL1-206ENST00000622710 SCRIBQ14160 1630 aa41.15■■■■■ 4.18
LRCOL1-206ENST00000622710 SHROOM4Q9ULL8 1493 aa40.82■■■■■ 4.12
LRCOL1-206ENST00000622710 DNAJC5BQ9UF47 199 aa40.61■■■■■ 4.09
LRCOL1-206ENST00000622710 EIF4G1Q04637 1599 aaKnown RBP40.14■■■■■ 4.02
LRCOL1-206ENST00000622710 CC2D2AQ9P2K1 1620 aa40■■■■□ 3.99
LRCOL1-206ENST00000622710 CECR2Q9BXF3 1484 aa39.73■■■■□ 3.95
LRCOL1-206ENST00000622710 SMARCA4P51532 1647 aa39.35■■■■□ 3.89
LRCOL1-206ENST00000622710 BAZ1AQ9NRL2 1556 aaPredicted RBP39.28■■■■□ 3.88
LRCOL1-206ENST00000622710 ATAD2BQ9ULI0 1458 aa39.14■■■■□ 3.86
LRCOL1-206ENST00000622710 NCAPD3P42695 1498 aa39.13■■■■□ 3.85
LRCOL1-206ENST00000622710 SMARCA2P51531 1590 aa39.1■■■■□ 3.85
LRCOL1-206ENST00000622710 MROH2BQ7Z745 1585 aa39.04■■■■□ 3.84
LRCOL1-206ENST00000622710 PEG3Q9GZU2 1588 aa38.99■■■■□ 3.83
LRCOL1-206ENST00000622710 HMGXB3Q12766 1538 aa38.97■■■■□ 3.83
LRCOL1-206ENST00000622710 BAZ1BQ9UIG0 1483 aaKnown RBP38.81■■■■□ 3.8
LRCOL1-206ENST00000622710 WIZO95785 1651 aa38.61■■■■□ 3.77
LRCOL1-206ENST00000622710 RSF1Q96T23 1441 aaPredicted RBP38.54■■■■□ 3.76
LRCOL1-206ENST00000622710 TOP2AP11388 1531 aaKnown RBP38.22■■■■□ 3.71
LRCOL1-206ENST00000622710 NESP48681 1621 aa38.22■■■■□ 3.71
LRCOL1-206ENST00000622710 LAMC3Q9Y6N6 1575 aa38.14■■■■□ 3.7
LRCOL1-206ENST00000622710 ERCC6Q03468 1493 aa38.1■■■■□ 3.69
LRCOL1-206ENST00000622710 CADPSQ9ULU8 1353 aa37.95■■■■□ 3.67
LRCOL1-206ENST00000622710 PDS5BQ9NTI5 1447 aa37.84■■■■□ 3.65
LRCOL1-206ENST00000622710 KIF21AQ7Z4S6 1674 aa37.79■■■■□ 3.64
LRCOL1-206ENST00000622710 CUX2O14529 1486 aa37.77■■■■□ 3.64
LRCOL1-206ENST00000622710 CFTRP13569 1480 aa37.75■■■■□ 3.63
LRCOL1-206ENST00000622710 THOC2Q8NI27 1593 aaKnown RBP37.73■■■■□ 3.63
LRCOL1-206ENST00000622710 CCDC88BA6NC98 1476 aa37.73■■■■□ 3.63
LRCOL1-206ENST00000622710 FANCD2Q9BXW9 1451 aa37.55■■■■□ 3.6
LRCOL1-206ENST00000622710 CEP164Q9UPV0 1460 aa37.52■■■■□ 3.6
LRCOL1-206ENST00000622710 MRC2Q9UBG0 1479 aa37.5■■■■□ 3.59
LRCOL1-206ENST00000622710 PRDM2Q13029 1718 aa37.49■■■■□ 3.59
LRCOL1-206ENST00000622710 WDR62O43379 1518 aa37.41■■■■□ 3.58
LRCOL1-206ENST00000622710 SUPT5HO00267 1087 aaKnown RBP37.38■■■■□ 3.57
LRCOL1-206ENST00000622710 URB2Q14146 1524 aaKnown RBP37.2■■■■□ 3.55
LRCOL1-206ENST00000622710 TOPBP1Q92547 1522 aa36.95■■■■□ 3.5
LRCOL1-206ENST00000622710 ABCC8Q09428 1581 aa36.91■■■■□ 3.5
LRCOL1-206ENST00000622710 DNMBPQ6XZF7 1577 aa36.91■■■■□ 3.5
LRCOL1-206ENST00000622710 IFT140Q96RY7 1462 aa36.74■■■■□ 3.47
LRCOL1-206ENST00000622710 DNAJC5Q9H3Z4 198 aa36.65■■■■□ 3.46
LRCOL1-206ENST00000622710 CUX1P39880 1505 aa36.64■■■■□ 3.46
LRCOL1-206ENST00000622710 POLA1P09884 1462 aaPredicted RBP36.63■■■■□ 3.45
LRCOL1-206ENST00000622710 TARBP1Q13395 1621 aaKnown RBP36.58■■■■□ 3.45
LRCOL1-206ENST00000622710 ZNF608Q9ULD9 1512 aaPredicted RBP36.58■■■■□ 3.45
LRCOL1-206ENST00000622710 FGD5Q6ZNL6 1462 aa36.52■■■■□ 3.44
LRCOL1-206ENST00000622710 EIF4G3O43432 1585 aaKnown RBP36.48■■■■□ 3.43
LRCOL1-206ENST00000622710 RAD54L2Q9Y4B4 1467 aa36.44■■■■□ 3.42
LRCOL1-206ENST00000622710 SOGA1O94964 1423 aa36.42■■■■□ 3.42
LRCOL1-206ENST00000622710 WRNQ14191 1432 aaPredicted RBP eCLIP36.34■■■■□ 3.41
LRCOL1-206ENST00000622710 AQRO60306 1485 aaKnown RBP eCLIP36.33■■■■□ 3.41
LRCOL1-206ENST00000622710 BIVM-ERCC5R4GMW8 1640 aa36.31■■■■□ 3.4
LRCOL1-206ENST00000622710 TOP2BQ02880 1626 aa36.3■■■■□ 3.4
LRCOL1-206ENST00000622710 WDR97A6NE52 1622 aa36.3■■■■□ 3.4
LRCOL1-206ENST00000622710 SYNJ1O43426 1573 aa36.29■■■■□ 3.4
LRCOL1-206ENST00000622710 TDRD9Q8NDG6 1382 aaKnown RBP36.23■■■■□ 3.39
LRCOL1-206ENST00000622710 ABCA10Q8WWZ4 1543 aa36.18■■■■□ 3.38
LRCOL1-206ENST00000622710 OSCARQ8IYS5 282 aa36.08■■■■□ 3.37
LRCOL1-206ENST00000622710 ABCA5Q8WWZ7 1642 aa36.08■■■■□ 3.37
LRCOL1-206ENST00000622710 GRIN2BQ13224 1484 aa36.05■■■■□ 3.36
LRCOL1-206ENST00000622710 GAPVD1Q14C86 1478 aa36.03■■■■□ 3.36
LRCOL1-206ENST00000622710 SNAPC4Q5SXM2 1469 aa36.03■■■■□ 3.36
LRCOL1-206ENST00000622710 CHD1O14646 1710 aa36.01■■■■□ 3.36
LRCOL1-206ENST00000622710 PBRM1Q86U86 1689 aa36■■■■□ 3.35
LRCOL1-206ENST00000622710 MAGI1Q96QZ7 1491 aaPredicted RBP35.99■■■■□ 3.35
LRCOL1-206ENST00000622710 FBLN2P98095 1184 aa35.84■■■■□ 3.33
LRCOL1-206ENST00000622710 SYNJ2O15056 1496 aa35.84■■■■□ 3.33
LRCOL1-206ENST00000622710 CHMP7Q8WUX9 453 aaPredicted RBP35.75■■■■□ 3.31
LRCOL1-206ENST00000622710 ERICH3Q5RHP9 1530 aa35.74■■■■□ 3.31
LRCOL1-206ENST00000622710 ADAMTS12P58397 1594 aa35.73■■■■□ 3.31
LRCOL1-206ENST00000622710 CLASP1Q7Z460 1538 aa35.64■■■■□ 3.3
LRCOL1-206ENST00000622710 RIMBP3CA6NJZ7 1639 aa35.61■■■■□ 3.29
LRCOL1-206ENST00000622710 RIMBP3BA6NNM3 1639 aa35.61■■■■□ 3.29
LRCOL1-206ENST00000622710 RIMBP3Q9UFD9 1639 aa35.61■■■■□ 3.29
LRCOL1-206ENST00000622710 FHAD1B1AJZ9 1412 aa35.61■■■■□ 3.29
LRCOL1-206ENST00000622710 GRIN2AQ12879 1464 aa35.6■■■■□ 3.29
LRCOL1-206ENST00000622710 ARHGEF11O15085 1522 aa35.6■■■■□ 3.29
LRCOL1-206ENST00000622710 KIF27Q86VH2 1401 aa35.57■■■■□ 3.29
LRCOL1-206ENST00000622710 NUP160Q12769 1436 aa35.46■■■■□ 3.27
LRCOL1-206ENST00000622710 CEP170Q5SW79 1584 aa35.45■■■■□ 3.27
LRCOL1-206ENST00000622710 IGF1RP08069 1367 aa35.42■■■■□ 3.26
LRCOL1-206ENST00000622710 CUL7Q14999 1698 aa35.41■■■■□ 3.26
LRCOL1-206ENST00000622710 TRIM41Q8WV44 630 aa35.38■■■■□ 3.25
LRCOL1-206ENST00000622710 ARAP1Q96P48 1450 aa35.32■■■■□ 3.24
LRCOL1-206ENST00000622710 SHROOM2Q13796 1616 aa35.23■■■■□ 3.23
LRCOL1-206ENST00000622710 RUSC2Q8N2Y8 1516 aa35.22■■■■□ 3.23
LRCOL1-206ENST00000622710 CARMIL1Q5VZK9 1371 aa35.2■■■■□ 3.23
LRCOL1-206ENST00000622710 CYB5RLQ6IPT4 315 aa35.17■■■■□ 3.22
LRCOL1-206ENST00000622710 ERCC6L2Q5T890 1561 aa35.13■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms