RNA–Protein interactions for RNA: ENST00000622406.4

PCID2-216, Transcript of PCI domain containing 2, humanhuman

TSL 5 BASIC

Gene PCID2, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCID2-216ENST00000622406 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
PCID2-216ENST00000622406 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
PCID2-216ENST00000622406 ABCC9O60706 1549 aa22.8■■□□□ 1.24
PCID2-216ENST00000622406 DCAF8L2P0C7V8 631 aa22.01■■□□□ 1.11
PCID2-216ENST00000622406 RB1CC1Q8TDY2 1594 aa21.75■■□□□ 1.07
PCID2-216ENST00000622406 NACADO15069 1562 aa21.67■■□□□ 1.06
PCID2-216ENST00000622406 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
PCID2-216ENST00000622406 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
PCID2-216ENST00000622406 PABPN1Q86U42 306 aaKnown RBP eCLIP21.39■■□□□ 1.022e-6■□□□□ 11.3
PCID2-216ENST00000622406 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
PCID2-216ENST00000622406 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
PCID2-216ENST00000622406 DNAJC5BQ9UF47 199 aa21.14■□□□□ 0.98
PCID2-216ENST00000622406 BICRAQ9NZM4 1560 aa21.07■□□□□ 0.96
PCID2-216ENST00000622406 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
PCID2-216ENST00000622406 SHROOM4Q9ULL8 1493 aa20.76■□□□□ 0.91
PCID2-216ENST00000622406 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
PCID2-216ENST00000622406 CC2D2AQ9P2K1 1620 aa20.53■□□□□ 0.88
PCID2-216ENST00000622406 CECR2Q9BXF3 1484 aa20.48■□□□□ 0.87
PCID2-216ENST00000622406 SMARCA4P51532 1647 aa20.05■□□□□ 0.8
PCID2-216ENST00000622406 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
PCID2-216ENST00000622406 ATAD2BQ9ULI0 1458 aa20.04■□□□□ 0.8
PCID2-216ENST00000622406 BAZ1AQ9NRL2 1556 aaPredicted RBP20.03■□□□□ 0.8
PCID2-216ENST00000622406 SMARCA2P51531 1590 aa19.98■□□□□ 0.79
PCID2-216ENST00000622406 MROH2BQ7Z745 1585 aa19.94■□□□□ 0.78
PCID2-216ENST00000622406 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
PCID2-216ENST00000622406 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
PCID2-216ENST00000622406 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
PCID2-216ENST00000622406 WIZO95785 1651 aa19.71■□□□□ 0.75
PCID2-216ENST00000622406 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
PCID2-216ENST00000622406 ERCC6Q03468 1493 aa19.68■□□□□ 0.74
PCID2-216ENST00000622406 NESP48681 1621 aa19.66■□□□□ 0.74
PCID2-216ENST00000622406 CADPSQ9ULU8 1353 aa19.51■□□□□ 0.71
PCID2-216ENST00000622406 LAMC3Q9Y6N6 1575 aa19.5■□□□□ 0.71
PCID2-216ENST00000622406 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
PCID2-216ENST00000622406 TOP2AP11388 1531 aaKnown RBP19.45■□□□□ 0.7
PCID2-216ENST00000622406 CUX2O14529 1486 aa19.42■□□□□ 0.7
PCID2-216ENST00000622406 SUPT5HO00267 1087 aaKnown RBP19.36■□□□□ 0.69
PCID2-216ENST00000622406 KIF21AQ7Z4S6 1674 aa19.32■□□□□ 0.68
PCID2-216ENST00000622406 CCDC88BA6NC98 1476 aa19.31■□□□□ 0.68
PCID2-216ENST00000622406 CFTRP13569 1480 aa19.29■□□□□ 0.68
PCID2-216ENST00000622406 FANCD2Q9BXW9 1451 aa19.27■□□□□ 0.67
PCID2-216ENST00000622406 THOC2Q8NI27 1593 aaKnown RBP19.26■□□□□ 0.67
PCID2-216ENST00000622406 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
PCID2-216ENST00000622406 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
PCID2-216ENST00000622406 DNAJC5Q9H3Z4 198 aa19.15■□□□□ 0.66
PCID2-216ENST00000622406 WDR62O43379 1518 aa19.1■□□□□ 0.65
PCID2-216ENST00000622406 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
PCID2-216ENST00000622406 PRDM2Q13029 1718 aa18.98■□□□□ 0.63
PCID2-216ENST00000622406 TOPBP1Q92547 1522 aa18.92■□□□□ 0.62
PCID2-216ENST00000622406 ABCC8Q09428 1581 aa18.9■□□□□ 0.62
PCID2-216ENST00000622406 IFT140Q96RY7 1462 aa18.84■□□□□ 0.61
PCID2-216ENST00000622406 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
PCID2-216ENST00000622406 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
PCID2-216ENST00000622406 OSCARQ8IYS5 282 aa18.77■□□□□ 0.6
PCID2-216ENST00000622406 SOGA1O94964 1423 aa18.75■□□□□ 0.59
PCID2-216ENST00000622406 POLA1P09884 1462 aaPredicted RBP18.74■□□□□ 0.59
PCID2-216ENST00000622406 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
PCID2-216ENST00000622406 AQRO60306 1485 aaKnown RBP eCLIP18.72■□□□□ 0.596e-9■■■■■ 40.7
PCID2-216ENST00000622406 CUX1P39880 1505 aa18.71■□□□□ 0.59
PCID2-216ENST00000622406 TDRD9Q8NDG6 1382 aaKnown RBP18.7■□□□□ 0.58
PCID2-216ENST00000622406 FGD5Q6ZNL6 1462 aa18.69■□□□□ 0.58
PCID2-216ENST00000622406 FBLN2P98095 1184 aa18.68■□□□□ 0.58
PCID2-216ENST00000622406 TARBP1Q13395 1621 aaKnown RBP18.65■□□□□ 0.58
PCID2-216ENST00000622406 EIF4G3O43432 1585 aaKnown RBP18.62■□□□□ 0.57
PCID2-216ENST00000622406 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
PCID2-216ENST00000622406 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.56
PCID2-216ENST00000622406 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
PCID2-216ENST00000622406 CHMP7Q8WUX9 453 aaPredicted RBP18.54■□□□□ 0.56
PCID2-216ENST00000622406 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
PCID2-216ENST00000622406 GAPVD1Q14C86 1478 aa18.49■□□□□ 0.55
PCID2-216ENST00000622406 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
PCID2-216ENST00000622406 SYNJ1O43426 1573 aa18.47■□□□□ 0.55
PCID2-216ENST00000622406 ABCA10Q8WWZ4 1543 aa18.46■□□□□ 0.55
PCID2-216ENST00000622406 TOP2BQ02880 1626 aa18.46■□□□□ 0.55
PCID2-216ENST00000622406 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
PCID2-216ENST00000622406 BIVM-ERCC5R4GMW8 1640 aa18.42■□□□□ 0.54
PCID2-216ENST00000622406 CHD1O14646 1710 aa18.42■□□□□ 0.54
PCID2-216ENST00000622406 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
PCID2-216ENST00000622406 SYNJ2O15056 1496 aa18.37■□□□□ 0.53
PCID2-216ENST00000622406 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
PCID2-216ENST00000622406 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
PCID2-216ENST00000622406 PBRM1Q86U86 1689 aa18.33■□□□□ 0.53
PCID2-216ENST00000622406 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
PCID2-216ENST00000622406 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
PCID2-216ENST00000622406 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
PCID2-216ENST00000622406 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
PCID2-216ENST00000622406 FHAD1B1AJZ9 1412 aa18.26■□□□□ 0.51
PCID2-216ENST00000622406 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
PCID2-216ENST00000622406 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
PCID2-216ENST00000622406 KIF27Q86VH2 1401 aa18.22■□□□□ 0.51
PCID2-216ENST00000622406 CLASP1Q7Z460 1538 aa18.2■□□□□ 0.5
PCID2-216ENST00000622406 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
PCID2-216ENST00000622406 IGF1RP08069 1367 aa18.19■□□□□ 0.5
PCID2-216ENST00000622406 ARAP1Q96P48 1450 aa18.16■□□□□ 0.5
PCID2-216ENST00000622406 NUP160Q12769 1436 aa18.13■□□□□ 0.49
PCID2-216ENST00000622406 JPH4Q96JJ6 628 aa18.11■□□□□ 0.49
PCID2-216ENST00000622406 CEP170Q5SW79 1584 aa18.11■□□□□ 0.49
PCID2-216ENST00000622406 CARMIL1Q5VZK9 1371 aa18.09■□□□□ 0.49
PCID2-216ENST00000622406 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.49
PCID2-216ENST00000622406 PRG4Q92954 1404 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms