RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 NISCHQ9Y2I1 1504 aa11.05□□□□□ -0.64
LINC00649-219ENST00000622171 CCDC180Q9P1Z9 1646 aa9.89□□□□□ -0.83
LINC00649-219ENST00000622171 ABCC9O60706 1549 aa9.88□□□□□ -0.83
LINC00649-219ENST00000622171 DCAF8L2P0C7V8 631 aa9.38□□□□□ -0.91
LINC00649-219ENST00000622171 RB1CC1Q8TDY2 1594 aa9.35□□□□□ -0.91
LINC00649-219ENST00000622171 UNC13AQ9UPW8 1703 aa9.33□□□□□ -0.92
LINC00649-219ENST00000622171 NACADO15069 1562 aa9.26□□□□□ -0.93
LINC00649-219ENST00000622171 PABPN1Q86U42 306 aaKnown RBP eCLIP9.2□□□□□ -0.94
LINC00649-219ENST00000622171 ZCCHC6Q5VYS8 1495 aaKnown RBP9.2□□□□□ -0.94
LINC00649-219ENST00000622171 SCRIBQ14160 1630 aa9.17□□□□□ -0.94
LINC00649-219ENST00000622171 BICRAQ9NZM4 1560 aa9.13□□□□□ -0.95
LINC00649-219ENST00000622171 DNAJC5BQ9UF47 199 aa9.12□□□□□ -0.95
LINC00649-219ENST00000622171 MYO15BQ96JP2 1530 aa9.06□□□□□ -0.96
LINC00649-219ENST00000622171 DCAF1Q9Y4B6 1507 aa9.03□□□□□ -0.96
LINC00649-219ENST00000622171 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
LINC00649-219ENST00000622171 EIF4G1Q04637 1599 aaKnown RBP8.88□□□□□ -0.99
LINC00649-219ENST00000622171 SHROOM4Q9ULL8 1493 aa8.87□□□□□ -0.99
LINC00649-219ENST00000622171 CECR2Q9BXF3 1484 aa8.82□□□□□ -1
LINC00649-219ENST00000622171 SMARCA4P51532 1647 aa8.66□□□□□ -1.02
LINC00649-219ENST00000622171 MROH2BQ7Z745 1585 aa8.59□□□□□ -1.03
LINC00649-219ENST00000622171 ATAD2BQ9ULI0 1458 aa8.57□□□□□ -1.04
LINC00649-219ENST00000622171 BAZ1AQ9NRL2 1556 aaPredicted RBP8.56□□□□□ -1.04
LINC00649-219ENST00000622171 WIZO95785 1651 aa8.56□□□□□ -1.04
LINC00649-219ENST00000622171 SMARCA2P51531 1590 aa8.54□□□□□ -1.04
LINC00649-219ENST00000622171 NESP48681 1621 aa8.54□□□□□ -1.04
LINC00649-219ENST00000622171 BAZ1BQ9UIG0 1483 aaKnown RBP8.53□□□□□ -1.04
LINC00649-219ENST00000622171 HMGXB3Q12766 1538 aa8.52□□□□□ -1.05
LINC00649-219ENST00000622171 NCAPD3P42695 1498 aa8.51□□□□□ -1.05
LINC00649-219ENST00000622171 KIF21AQ7Z4S6 1674 aa8.49□□□□□ -1.05
LINC00649-219ENST00000622171 ERCC6Q03468 1493 aa8.48□□□□□ -1.05
LINC00649-219ENST00000622171 PEG3Q9GZU2 1588 aa8.48□□□□□ -1.05
LINC00649-219ENST00000622171 THOC2Q8NI27 1593 aaKnown RBP8.4□□□□□ -1.06
LINC00649-219ENST00000622171 RSF1Q96T23 1441 aaPredicted RBP8.38□□□□□ -1.07
LINC00649-219ENST00000622171 LAMC3Q9Y6N6 1575 aa8.37□□□□□ -1.07
LINC00649-219ENST00000622171 TOP2AP11388 1531 aaKnown RBP8.36□□□□□ -1.07
LINC00649-219ENST00000622171 CUX2O14529 1486 aa8.32□□□□□ -1.08
LINC00649-219ENST00000622171 PRDM2Q13029 1718 aa8.32□□□□□ -1.08
LINC00649-219ENST00000622171 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
LINC00649-219ENST00000622171 PDS5BQ9NTI5 1447 aa8.27□□□□□ -1.09
LINC00649-219ENST00000622171 CCDC88BA6NC98 1476 aa8.26□□□□□ -1.09
LINC00649-219ENST00000622171 FANCD2Q9BXW9 1451 aa8.26□□□□□ -1.09
LINC00649-219ENST00000622171 MRC2Q9UBG0 1479 aa8.26□□□□□ -1.09
LINC00649-219ENST00000622171 CEP164Q9UPV0 1460 aa8.26□□□□□ -1.09
LINC00649-219ENST00000622171 WDR62O43379 1518 aa8.24□□□□□ -1.09
LINC00649-219ENST00000622171 URB2Q14146 1524 aaKnown RBP8.23□□□□□ -1.09
LINC00649-219ENST00000622171 CFTRP13569 1480 aa8.22□□□□□ -1.09
LINC00649-219ENST00000622171 SUPT5HO00267 1087 aaKnown RBP8.21□□□□□ -1.1
LINC00649-219ENST00000622171 DNAJC5Q9H3Z4 198 aa8.17□□□□□ -1.1
LINC00649-219ENST00000622171 TOPBP1Q92547 1522 aa8.13□□□□□ -1.11
LINC00649-219ENST00000622171 ZNF608Q9ULD9 1512 aaPredicted RBP8.13□□□□□ -1.11
LINC00649-219ENST00000622171 EIF4G3O43432 1585 aaKnown RBP8.11□□□□□ -1.11
LINC00649-219ENST00000622171 DNMBPQ6XZF7 1577 aa8.11□□□□□ -1.11
LINC00649-219ENST00000622171 CHD1O14646 1710 aa8.09□□□□□ -1.11
LINC00649-219ENST00000622171 RAD54L2Q9Y4B4 1467 aa8.07□□□□□ -1.12
LINC00649-219ENST00000622171 CUX1P39880 1505 aa8.07□□□□□ -1.12
LINC00649-219ENST00000622171 TARBP1Q13395 1621 aaKnown RBP8.07□□□□□ -1.12
LINC00649-219ENST00000622171 POLA1P09884 1462 aaPredicted RBP8.06□□□□□ -1.12
LINC00649-219ENST00000622171 ABCC8Q09428 1581 aa8.05□□□□□ -1.12
LINC00649-219ENST00000622171 FGD5Q6ZNL6 1462 aa8.05□□□□□ -1.12
LINC00649-219ENST00000622171 IFT140Q96RY7 1462 aa8.05□□□□□ -1.12
LINC00649-219ENST00000622171 TRIM41Q8WV44 630 aa8.04□□□□□ -1.12
LINC00649-219ENST00000622171 AQRO60306 1485 aaKnown RBP eCLIP8.04□□□□□ -1.12
LINC00649-219ENST00000622171 WDR97A6NE52 1622 aa8.03□□□□□ -1.12
LINC00649-219ENST00000622171 PBRM1Q86U86 1689 aa8.03□□□□□ -1.12
LINC00649-219ENST00000622171 SYNJ1O43426 1573 aa8.01□□□□□ -1.13
LINC00649-219ENST00000622171 TDRD9Q8NDG6 1382 aaKnown RBP8□□□□□ -1.13
LINC00649-219ENST00000622171 RIMBP3CA6NJZ7 1639 aa8□□□□□ -1.13
LINC00649-219ENST00000622171 RIMBP3BA6NNM3 1639 aa8□□□□□ -1.13
LINC00649-219ENST00000622171 RIMBP3Q9UFD9 1639 aa8□□□□□ -1.13
LINC00649-219ENST00000622171 FBLN2P98095 1184 aa7.99□□□□□ -1.13
LINC00649-219ENST00000622171 SOGA1O94964 1423 aa7.98□□□□□ -1.13
LINC00649-219ENST00000622171 SNAPC4Q5SXM2 1469 aa7.98□□□□□ -1.13
LINC00649-219ENST00000622171 BIVM-ERCC5R4GMW8 1640 aa7.96□□□□□ -1.14
LINC00649-219ENST00000622171 ABCA5Q8WWZ7 1642 aa7.94□□□□□ -1.14
LINC00649-219ENST00000622171 OSCARQ8IYS5 282 aa7.94□□□□□ -1.14
LINC00649-219ENST00000622171 TOP2BQ02880 1626 aa7.93□□□□□ -1.14
LINC00649-219ENST00000622171 ARHGEF11O15085 1522 aa7.93□□□□□ -1.14
LINC00649-219ENST00000622171 WRNQ14191 1432 aaPredicted RBP eCLIP7.92□□□□□ -1.14
LINC00649-219ENST00000622171 GAPVD1Q14C86 1478 aa7.9□□□□□ -1.14
LINC00649-219ENST00000622171 ADAMTS12P58397 1594 aa7.89□□□□□ -1.15
LINC00649-219ENST00000622171 ABCA10Q8WWZ4 1543 aa7.89□□□□□ -1.15
LINC00649-219ENST00000622171 GRIN2BQ13224 1484 aa7.89□□□□□ -1.15
LINC00649-219ENST00000622171 CLASP1Q7Z460 1538 aa7.88□□□□□ -1.15
LINC00649-219ENST00000622171 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
LINC00649-219ENST00000622171 ERCC6L2Q5T890 1561 aa7.87□□□□□ -1.15
LINC00649-219ENST00000622171 MAGI1Q96QZ7 1491 aaPredicted RBP7.87□□□□□ -1.15
LINC00649-219ENST00000622171 CEP170Q5SW79 1584 aa7.86□□□□□ -1.15
LINC00649-219ENST00000622171 CHMP7Q8WUX9 453 aaPredicted RBP7.86□□□□□ -1.15
LINC00649-219ENST00000622171 SYNJ2O15056 1496 aa7.86□□□□□ -1.15
LINC00649-219ENST00000622171 CYB5RLQ6IPT4 315 aa7.84□□□□□ -1.15
LINC00649-219ENST00000622171 GRIN2AQ12879 1464 aa7.82□□□□□ -1.16
LINC00649-219ENST00000622171 ERICH3Q5RHP9 1530 aa7.78□□□□□ -1.16
LINC00649-219ENST00000622171 RUSC2Q8N2Y8 1516 aa7.78□□□□□ -1.16
LINC00649-219ENST00000622171 FHAD1B1AJZ9 1412 aa7.77□□□□□ -1.17
LINC00649-219ENST00000622171 SHROOM2Q13796 1616 aa7.76□□□□□ -1.17
LINC00649-219ENST00000622171 TTBK1Q5TCY1 1321 aaPredicted RBP7.76□□□□□ -1.17
LINC00649-219ENST00000622171 TRHP20396 242 aaPredicted RBP7.75□□□□□ -1.17
LINC00649-219ENST00000622171 CUL7Q14999 1698 aa7.75□□□□□ -1.17
LINC00649-219ENST00000622171 NUP160Q12769 1436 aa7.75□□□□□ -1.17
LINC00649-219ENST00000622171 KIF27Q86VH2 1401 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms