RNA–Protein interactions for RNA: ENST00000622090.4

DDB2-215, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 5

Gene DDB2, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-215ENST00000622090 NISCHQ9Y2I1 1504 aa32.41■■■□□ 2.78
DDB2-215ENST00000622090 ABCC9O60706 1549 aa29.92■■■□□ 2.38
DDB2-215ENST00000622090 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
DDB2-215ENST00000622090 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
DDB2-215ENST00000622090 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
DDB2-215ENST00000622090 NACADO15069 1562 aa27.84■■■□□ 2.05
DDB2-215ENST00000622090 UNC13AQ9UPW8 1703 aa27.81■■■□□ 2.04
DDB2-215ENST00000622090 PABPN1Q86U42 306 aaKnown RBP eCLIP27.73■■■□□ 2.03
DDB2-215ENST00000622090 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
DDB2-215ENST00000622090 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
DDB2-215ENST00000622090 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
DDB2-215ENST00000622090 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
DDB2-215ENST00000622090 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
DDB2-215ENST00000622090 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
DDB2-215ENST00000622090 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
DDB2-215ENST00000622090 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
DDB2-215ENST00000622090 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
DDB2-215ENST00000622090 DCAF1Q9Y4B6 1507 aa26.7■■□□□ 1.86
DDB2-215ENST00000622090 DNAJC5Q9H3Z4 198 aa26.58■■□□□ 1.85
DDB2-215ENST00000622090 CUX2O14529 1486 aa25.95■■□□□ 1.74
DDB2-215ENST00000622090 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
DDB2-215ENST00000622090 NCAPD3P42695 1498 aa25.69■■□□□ 1.7
DDB2-215ENST00000622090 NESP48681 1621 aa25.59■■□□□ 1.69
DDB2-215ENST00000622090 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
DDB2-215ENST00000622090 HMGXB3Q12766 1538 aa25.49■■□□□ 1.67
DDB2-215ENST00000622090 THOC2Q8NI27 1593 aaKnown RBP25.48■■□□□ 1.67
DDB2-215ENST00000622090 SMARCA4P51532 1647 aa25.47■■□□□ 1.67
DDB2-215ENST00000622090 SMARCA2P51531 1590 aa25.44■■□□□ 1.66
DDB2-215ENST00000622090 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
DDB2-215ENST00000622090 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
DDB2-215ENST00000622090 LAMC3Q9Y6N6 1575 aa25.25■■□□□ 1.63
DDB2-215ENST00000622090 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
DDB2-215ENST00000622090 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
DDB2-215ENST00000622090 BAZ1AQ9NRL2 1556 aaPredicted RBP25.17■■□□□ 1.62
DDB2-215ENST00000622090 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
DDB2-215ENST00000622090 MROH2BQ7Z745 1585 aa25.02■■□□□ 1.6
DDB2-215ENST00000622090 WDR62O43379 1518 aa24.92■■□□□ 1.58
DDB2-215ENST00000622090 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
DDB2-215ENST00000622090 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
DDB2-215ENST00000622090 WIZO95785 1651 aa24.75■■□□□ 1.55
DDB2-215ENST00000622090 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
DDB2-215ENST00000622090 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
DDB2-215ENST00000622090 OSCARQ8IYS5 282 aa24.6■■□□□ 1.53
DDB2-215ENST00000622090 RIMBP3CA6NJZ7 1639 aa24.55■■□□□ 1.52
DDB2-215ENST00000622090 RIMBP3BA6NNM3 1639 aa24.55■■□□□ 1.52
DDB2-215ENST00000622090 RIMBP3Q9UFD9 1639 aa24.55■■□□□ 1.52
DDB2-215ENST00000622090 URB2Q14146 1524 aaKnown RBP24.53■■□□□ 1.52
DDB2-215ENST00000622090 CFTRP13569 1480 aa24.5■■□□□ 1.51
DDB2-215ENST00000622090 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
DDB2-215ENST00000622090 ARHGEF11O15085 1522 aa24.35■■□□□ 1.49
DDB2-215ENST00000622090 ZNF608Q9ULD9 1512 aaPredicted RBP24.33■■□□□ 1.49
DDB2-215ENST00000622090 TOP2AP11388 1531 aaKnown RBP24.3■■□□□ 1.48
DDB2-215ENST00000622090 RSF1Q96T23 1441 aaPredicted RBP24.23■■□□□ 1.47
DDB2-215ENST00000622090 IFT140Q96RY7 1462 aa24.2■■□□□ 1.47
DDB2-215ENST00000622090 CHD1O14646 1710 aa24.19■■□□□ 1.46
DDB2-215ENST00000622090 EIF4G3O43432 1585 aaKnown RBP24.19■■□□□ 1.46
DDB2-215ENST00000622090 TOPBP1Q92547 1522 aa24.13■■□□□ 1.45
DDB2-215ENST00000622090 CYB5RLQ6IPT4 315 aa24.12■■□□□ 1.45
DDB2-215ENST00000622090 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
DDB2-215ENST00000622090 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
DDB2-215ENST00000622090 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
DDB2-215ENST00000622090 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
DDB2-215ENST00000622090 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
DDB2-215ENST00000622090 AQRO60306 1485 aaKnown RBP eCLIP23.99■■□□□ 1.433e-7■■■■■ 36.6
DDB2-215ENST00000622090 ABCC8Q09428 1581 aa23.92■■□□□ 1.42
DDB2-215ENST00000622090 FBLN2P98095 1184 aa23.85■■□□□ 1.41
DDB2-215ENST00000622090 POLA1P09884 1462 aaPredicted RBP23.84■■□□□ 1.41
DDB2-215ENST00000622090 CLASP1Q7Z460 1538 aa23.8■■□□□ 1.4
DDB2-215ENST00000622090 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
DDB2-215ENST00000622090 SNAPC4Q5SXM2 1469 aa23.73■■□□□ 1.39
DDB2-215ENST00000622090 TDRD9Q8NDG6 1382 aaKnown RBP23.72■■□□□ 1.39
DDB2-215ENST00000622090 AEBP2Q6ZN18 517 aaPredicted RBP23.68■■□□□ 1.38
DDB2-215ENST00000622090 SYNJ1O43426 1573 aa23.67■■□□□ 1.38
DDB2-215ENST00000622090 SOGA1O94964 1423 aa23.66■■□□□ 1.38
DDB2-215ENST00000622090 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
DDB2-215ENST00000622090 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
DDB2-215ENST00000622090 MAGI1Q96QZ7 1491 aaPredicted RBP23.59■■□□□ 1.37
DDB2-215ENST00000622090 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
DDB2-215ENST00000622090 CHMP7Q8WUX9 453 aaPredicted RBP23.55■■□□□ 1.36
DDB2-215ENST00000622090 CUX1P39880 1505 aa23.54■■□□□ 1.36
DDB2-215ENST00000622090 SYNJ2O15056 1496 aa23.53■■□□□ 1.36
DDB2-215ENST00000622090 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
DDB2-215ENST00000622090 GAPVD1Q14C86 1478 aa23.52■■□□□ 1.36
DDB2-215ENST00000622090 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
DDB2-215ENST00000622090 ABCA5Q8WWZ7 1642 aa23.39■■□□□ 1.33
DDB2-215ENST00000622090 KIF13AQ9H1H9 1805 aa23.36■■□□□ 1.33
DDB2-215ENST00000622090 CEP170Q5SW79 1584 aa23.3■■□□□ 1.32
DDB2-215ENST00000622090 ABCA10Q8WWZ4 1543 aa23.28■■□□□ 1.32
DDB2-215ENST00000622090 GRIN2AQ12879 1464 aa23.26■■□□□ 1.31
DDB2-215ENST00000622090 SHROOM2Q13796 1616 aa23.25■■□□□ 1.31
DDB2-215ENST00000622090 ADAMTS12P58397 1594 aa23.24■■□□□ 1.31
DDB2-215ENST00000622090 NUP160Q12769 1436 aa23.2■■□□□ 1.3
DDB2-215ENST00000622090 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
DDB2-215ENST00000622090 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
DDB2-215ENST00000622090 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
DDB2-215ENST00000622090 PRG4Q92954 1404 aaPredicted RBP22.99■■□□□ 1.27
DDB2-215ENST00000622090 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
DDB2-215ENST00000622090 DIP2BQ9P265 1576 aa22.98■■□□□ 1.27
DDB2-215ENST00000622090 ERICH3Q5RHP9 1530 aa22.98■■□□□ 1.27
DDB2-215ENST00000622090 ABCC10Q5T3U5 1492 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms