RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
TARDBP-227ENST00000622057 ABCC9O60706 1549 aa20.87■□□□□ 0.93
TARDBP-227ENST00000622057 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
TARDBP-227ENST00000622057 DCAF8L2P0C7V8 631 aa19.8■□□□□ 0.76
TARDBP-227ENST00000622057 RB1CC1Q8TDY2 1594 aa19.77■□□□□ 0.76
TARDBP-227ENST00000622057 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
TARDBP-227ENST00000622057 NACADO15069 1562 aa19.62■□□□□ 0.73
TARDBP-227ENST00000622057 PABPN1Q86U42 306 aaKnown RBP eCLIP19.53■□□□□ 0.72
TARDBP-227ENST00000622057 MYO15BQ96JP2 1530 aa19.31■□□□□ 0.68
TARDBP-227ENST00000622057 UNC13AQ9UPW8 1703 aa19.23■□□□□ 0.67
TARDBP-227ENST00000622057 BICRAQ9NZM4 1560 aa19.18■□□□□ 0.66
TARDBP-227ENST00000622057 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
TARDBP-227ENST00000622057 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
TARDBP-227ENST00000622057 SCRIBQ14160 1630 aa18.94■□□□□ 0.62
TARDBP-227ENST00000622057 SHROOM4Q9ULL8 1493 aa18.87■□□□□ 0.61
TARDBP-227ENST00000622057 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
TARDBP-227ENST00000622057 CC2D2AQ9P2K1 1620 aa18.78■□□□□ 0.6
TARDBP-227ENST00000622057 EIF4G1Q04637 1599 aaKnown RBP18.73■□□□□ 0.59
TARDBP-227ENST00000622057 NCAPD3P42695 1498 aa18.16■□□□□ 0.5
TARDBP-227ENST00000622057 ATAD2BQ9ULI0 1458 aa18.11■□□□□ 0.49
TARDBP-227ENST00000622057 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
TARDBP-227ENST00000622057 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
TARDBP-227ENST00000622057 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
TARDBP-227ENST00000622057 SMARCA2P51531 1590 aa18.01■□□□□ 0.47
TARDBP-227ENST00000622057 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
TARDBP-227ENST00000622057 HMGXB3Q12766 1538 aa17.95■□□□□ 0.46
TARDBP-227ENST00000622057 BAZ1BQ9UIG0 1483 aaKnown RBP17.94■□□□□ 0.46
TARDBP-227ENST00000622057 CUX2O14529 1486 aa17.93■□□□□ 0.46
TARDBP-227ENST00000622057 NESP48681 1621 aa17.91■□□□□ 0.46
TARDBP-227ENST00000622057 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
TARDBP-227ENST00000622057 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
TARDBP-227ENST00000622057 LAMC3Q9Y6N6 1575 aa17.7■□□□□ 0.42
TARDBP-227ENST00000622057 PDS5BQ9NTI5 1447 aa17.69■□□□□ 0.42
TARDBP-227ENST00000622057 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
TARDBP-227ENST00000622057 WIZO95785 1651 aa17.63■□□□□ 0.41
TARDBP-227ENST00000622057 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
TARDBP-227ENST00000622057 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
TARDBP-227ENST00000622057 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
TARDBP-227ENST00000622057 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
TARDBP-227ENST00000622057 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
TARDBP-227ENST00000622057 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
TARDBP-227ENST00000622057 WDR62O43379 1518 aa17.41■□□□□ 0.38
TARDBP-227ENST00000622057 CFTRP13569 1480 aa17.4■□□□□ 0.38
TARDBP-227ENST00000622057 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
TARDBP-227ENST00000622057 TRIM41Q8WV44 630 aa17.32■□□□□ 0.36
TARDBP-227ENST00000622057 URB2Q14146 1524 aaKnown RBP17.26■□□□□ 0.35
TARDBP-227ENST00000622057 CCDC88BA6NC98 1476 aa17.25■□□□□ 0.35
TARDBP-227ENST00000622057 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
TARDBP-227ENST00000622057 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
TARDBP-227ENST00000622057 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
TARDBP-227ENST00000622057 TOPBP1Q92547 1522 aa17.07■□□□□ 0.32
TARDBP-227ENST00000622057 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
TARDBP-227ENST00000622057 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
TARDBP-227ENST00000622057 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
TARDBP-227ENST00000622057 DNMBPQ6XZF7 1577 aa16.98■□□□□ 0.31
TARDBP-227ENST00000622057 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.315e-11■■□□□ 14.4
TARDBP-227ENST00000622057 FBLN2P98095 1184 aa16.95■□□□□ 0.3
TARDBP-227ENST00000622057 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
TARDBP-227ENST00000622057 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
TARDBP-227ENST00000622057 RAD54L2Q9Y4B4 1467 aa16.9■□□□□ 0.3
TARDBP-227ENST00000622057 SOGA1O94964 1423 aa16.89■□□□□ 0.29
TARDBP-227ENST00000622057 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
TARDBP-227ENST00000622057 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
TARDBP-227ENST00000622057 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
TARDBP-227ENST00000622057 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
TARDBP-227ENST00000622057 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
TARDBP-227ENST00000622057 CYB5RLQ6IPT4 315 aa16.87■□□□□ 0.29
TARDBP-227ENST00000622057 TARBP1Q13395 1621 aaKnown RBP16.87■□□□□ 0.29
TARDBP-227ENST00000622057 ARHGEF11O15085 1522 aa16.85■□□□□ 0.29
TARDBP-227ENST00000622057 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
TARDBP-227ENST00000622057 CHMP7Q8WUX9 453 aaPredicted RBP16.79■□□□□ 0.28
TARDBP-227ENST00000622057 CHD1O14646 1710 aa16.76■□□□□ 0.27
TARDBP-227ENST00000622057 CUX1P39880 1505 aa16.76■□□□□ 0.27
TARDBP-227ENST00000622057 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
TARDBP-227ENST00000622057 TRHP20396 242 aaPredicted RBP16.71■□□□□ 0.27
TARDBP-227ENST00000622057 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
TARDBP-227ENST00000622057 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
TARDBP-227ENST00000622057 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
TARDBP-227ENST00000622057 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
TARDBP-227ENST00000622057 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
TARDBP-227ENST00000622057 SYNJ2O15056 1496 aa16.63■□□□□ 0.25
TARDBP-227ENST00000622057 SYNJ1O43426 1573 aa16.61■□□□□ 0.25
TARDBP-227ENST00000622057 CLASP1Q7Z460 1538 aa16.6■□□□□ 0.25
TARDBP-227ENST00000622057 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
TARDBP-227ENST00000622057 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
TARDBP-227ENST00000622057 PBRM1Q86U86 1689 aa16.53■□□□□ 0.24
TARDBP-227ENST00000622057 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
TARDBP-227ENST00000622057 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
TARDBP-227ENST00000622057 GRIN2AQ12879 1464 aa16.47■□□□□ 0.23
TARDBP-227ENST00000622057 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
TARDBP-227ENST00000622057 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
TARDBP-227ENST00000622057 ADAMTS12P58397 1594 aa16.4■□□□□ 0.22
TARDBP-227ENST00000622057 NUP160Q12769 1436 aa16.4■□□□□ 0.22
TARDBP-227ENST00000622057 CEP170Q5SW79 1584 aa16.38■□□□□ 0.21
TARDBP-227ENST00000622057 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
TARDBP-227ENST00000622057 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
TARDBP-227ENST00000622057 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
TARDBP-227ENST00000622057 PRG4Q92954 1404 aaPredicted RBP16.31■□□□□ 0.2
TARDBP-227ENST00000622057 SHROOM2Q13796 1616 aa16.27■□□□□ 0.19
TARDBP-227ENST00000622057 IGF1RP08069 1367 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms