RNA–Protein interactions for RNA: ENST00000621767.1

LHX1-205, Transcript of LIM homeobox 1, humanhuman

TSL 2

Gene LHX1, Length 512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-205ENST00000621767 NISCHQ9Y2I1 1504 aa48.27■■■■■ 5.32
LHX1-205ENST00000621767 CCDC180Q9P1Z9 1646 aa43.18■■■■■ 4.5
LHX1-205ENST00000621767 ABCC9O60706 1549 aa43.13■■■■■ 4.5
LHX1-205ENST00000621767 RB1CC1Q8TDY2 1594 aa41.11■■■■■ 4.17
LHX1-205ENST00000621767 NACADO15069 1562 aa40.87■■■■■ 4.13
LHX1-205ENST00000621767 DCAF8L2P0C7V8 631 aa40.77■■■■■ 4.12
LHX1-205ENST00000621767 MYO15BQ96JP2 1530 aa40.39■■■■■ 4.06
LHX1-205ENST00000621767 DNAJC5BQ9UF47 199 aa40.39■■■■■ 4.06
LHX1-205ENST00000621767 PABPN1Q86U42 306 aaKnown RBP eCLIP40.23■■■■■ 4.03
LHX1-205ENST00000621767 ZCCHC6Q5VYS8 1495 aaKnown RBP40.01■■■■■ 4
LHX1-205ENST00000621767 UNC13AQ9UPW8 1703 aa39.99■■■■□ 3.99
LHX1-205ENST00000621767 DCAF1Q9Y4B6 1507 aa39.91■■■■□ 3.98
LHX1-205ENST00000621767 BICRAQ9NZM4 1560 aa39.85■■■■□ 3.97
LHX1-205ENST00000621767 SHROOM4Q9ULL8 1493 aa39.43■■■■□ 3.9
LHX1-205ENST00000621767 SCRIBQ14160 1630 aa39.35■■■■□ 3.89
LHX1-205ENST00000621767 CC2D2AQ9P2K1 1620 aa38.92■■■■□ 3.82
LHX1-205ENST00000621767 EIF4G1Q04637 1599 aaKnown RBP38.9■■■■□ 3.82
LHX1-205ENST00000621767 CECR2Q9BXF3 1484 aa38.86■■■■□ 3.81
LHX1-205ENST00000621767 NCAPD3P42695 1498 aa37.78■■■■□ 3.64
LHX1-205ENST00000621767 ATAD2BQ9ULI0 1458 aa37.65■■■■□ 3.62
LHX1-205ENST00000621767 SMARCA4P51532 1647 aa37.57■■■■□ 3.6
LHX1-205ENST00000621767 SMARCA2P51531 1590 aa37.54■■■■□ 3.6
LHX1-205ENST00000621767 BAZ1AQ9NRL2 1556 aaPredicted RBP37.46■■■■□ 3.59
LHX1-205ENST00000621767 HMGXB3Q12766 1538 aa37.45■■■■□ 3.59
LHX1-205ENST00000621767 BAZ1BQ9UIG0 1483 aaKnown RBP37.28■■■■□ 3.56
LHX1-205ENST00000621767 ERCC6Q03468 1493 aa37.26■■■■□ 3.55
LHX1-205ENST00000621767 PEG3Q9GZU2 1588 aa37.24■■■■□ 3.55
LHX1-205ENST00000621767 MROH2BQ7Z745 1585 aa37.17■■■■□ 3.54
LHX1-205ENST00000621767 CUX2O14529 1486 aa37.16■■■■□ 3.54
LHX1-205ENST00000621767 NESP48681 1621 aa37.07■■■■□ 3.52
LHX1-205ENST00000621767 DNAJC5Q9H3Z4 198 aa37.06■■■■□ 3.52
LHX1-205ENST00000621767 LAMC3Q9Y6N6 1575 aa36.84■■■■□ 3.49
LHX1-205ENST00000621767 PDS5BQ9NTI5 1447 aa36.71■■■■□ 3.47
LHX1-205ENST00000621767 WIZO95785 1651 aa36.67■■■■□ 3.46
LHX1-205ENST00000621767 CADPSQ9ULU8 1353 aa36.66■■■■□ 3.46
LHX1-205ENST00000621767 THOC2Q8NI27 1593 aaKnown RBP36.61■■■■□ 3.45
LHX1-205ENST00000621767 RSF1Q96T23 1441 aaPredicted RBP36.5■■■■□ 3.43
LHX1-205ENST00000621767 KIF21AQ7Z4S6 1674 aa36.49■■■■□ 3.43
LHX1-205ENST00000621767 MRC2Q9UBG0 1479 aa36.33■■■■□ 3.41
LHX1-205ENST00000621767 TOP2AP11388 1531 aaKnown RBP36.28■■■■□ 3.4
LHX1-205ENST00000621767 CFTRP13569 1480 aa36.23■■■■□ 3.39
LHX1-205ENST00000621767 CEP164Q9UPV0 1460 aa36.21■■■■□ 3.39
LHX1-205ENST00000621767 WDR62O43379 1518 aa36.2■■■■□ 3.39
LHX1-205ENST00000621767 FANCD2Q9BXW9 1451 aa36.19■■■■□ 3.38
LHX1-205ENST00000621767 CCDC88BA6NC98 1476 aa35.89■■■■□ 3.34
LHX1-205ENST00000621767 URB2Q14146 1524 aaKnown RBP35.85■■■■□ 3.33
LHX1-205ENST00000621767 PRDM2Q13029 1718 aa35.68■■■■□ 3.3
LHX1-205ENST00000621767 OSCARQ8IYS5 282 aa35.56■■■■□ 3.28
LHX1-205ENST00000621767 IFT140Q96RY7 1462 aa35.51■■■■□ 3.28
LHX1-205ENST00000621767 TOPBP1Q92547 1522 aa35.5■■■■□ 3.27
LHX1-205ENST00000621767 ABCC8Q09428 1581 aa35.5■■■■□ 3.27
LHX1-205ENST00000621767 SUPT5HO00267 1087 aaKnown RBP35.46■■■■□ 3.27
LHX1-205ENST00000621767 TRIM41Q8WV44 630 aa35.45■■■■□ 3.27
LHX1-205ENST00000621767 ZNF608Q9ULD9 1512 aaPredicted RBP35.39■■■■□ 3.26
LHX1-205ENST00000621767 DNMBPQ6XZF7 1577 aa35.35■■■■□ 3.25
LHX1-205ENST00000621767 POLA1P09884 1462 aaPredicted RBP35.15■■■■□ 3.22
LHX1-205ENST00000621767 EIF4G3O43432 1585 aaKnown RBP35.14■■■■□ 3.22
LHX1-205ENST00000621767 TARBP1Q13395 1621 aaKnown RBP35.12■■■■□ 3.21
LHX1-205ENST00000621767 AQRO60306 1485 aaKnown RBP eCLIP35.11■■■■□ 3.21
LHX1-205ENST00000621767 SOGA1O94964 1423 aa35.04■■■■□ 3.2
LHX1-205ENST00000621767 RAD54L2Q9Y4B4 1467 aa35.02■■■■□ 3.2
LHX1-205ENST00000621767 TDRD9Q8NDG6 1382 aaKnown RBP34.94■■■■□ 3.18
LHX1-205ENST00000621767 FGD5Q6ZNL6 1462 aa34.94■■■■□ 3.18
LHX1-205ENST00000621767 RIMBP3CA6NJZ7 1639 aa34.92■■■■□ 3.18
LHX1-205ENST00000621767 RIMBP3BA6NNM3 1639 aa34.92■■■■□ 3.18
LHX1-205ENST00000621767 RIMBP3Q9UFD9 1639 aa34.92■■■■□ 3.18
LHX1-205ENST00000621767 FBLN2P98095 1184 aa34.91■■■■□ 3.18
LHX1-205ENST00000621767 CUX1P39880 1505 aa34.91■■■■□ 3.18
LHX1-205ENST00000621767 ARHGEF11O15085 1522 aa34.88■■■■□ 3.17
LHX1-205ENST00000621767 WDR97A6NE52 1622 aa34.82■■■■□ 3.16
LHX1-205ENST00000621767 CHD1O14646 1710 aa34.81■■■■□ 3.16
LHX1-205ENST00000621767 SNAPC4Q5SXM2 1469 aa34.74■■■■□ 3.15
LHX1-205ENST00000621767 GRIN2BQ13224 1484 aa34.71■■■■□ 3.15
LHX1-205ENST00000621767 CHMP7Q8WUX9 453 aaPredicted RBP34.7■■■■□ 3.15
LHX1-205ENST00000621767 CYB5RLQ6IPT4 315 aa34.69■■■■□ 3.14
LHX1-205ENST00000621767 MAGI1Q96QZ7 1491 aaPredicted RBP34.68■■■■□ 3.14
LHX1-205ENST00000621767 GAPVD1Q14C86 1478 aa34.59■■■■□ 3.13
LHX1-205ENST00000621767 ABCA10Q8WWZ4 1543 aa34.57■■■■□ 3.12
LHX1-205ENST00000621767 SYNJ2O15056 1496 aa34.57■■■■□ 3.12
LHX1-205ENST00000621767 ARAP1Q96P48 1450 aa34.54■■■■□ 3.12
LHX1-205ENST00000621767 SYNJ1O43426 1573 aa34.52■■■■□ 3.12
LHX1-205ENST00000621767 CLASP1Q7Z460 1538 aa34.5■■■■□ 3.11
LHX1-205ENST00000621767 WRNQ14191 1432 aaPredicted RBP eCLIP34.5■■■■□ 3.11
LHX1-205ENST00000621767 ABCA5Q8WWZ7 1642 aa34.44■■■■□ 3.1
LHX1-205ENST00000621767 PBRM1Q86U86 1689 aa34.42■■■■□ 3.1
LHX1-205ENST00000621767 TOP2BQ02880 1626 aa34.37■■■■□ 3.09
LHX1-205ENST00000621767 BIVM-ERCC5R4GMW8 1640 aa34.34■■■■□ 3.09
LHX1-205ENST00000621767 TRHP20396 242 aaPredicted RBP34.27■■■■□ 3.08
LHX1-205ENST00000621767 GRIN2AQ12879 1464 aa34.23■■■■□ 3.07
LHX1-205ENST00000621767 FHAD1B1AJZ9 1412 aa34.19■■■■□ 3.06
LHX1-205ENST00000621767 ADAMTS12P58397 1594 aa34.18■■■■□ 3.06
LHX1-205ENST00000621767 ERICH3Q5RHP9 1530 aa34.14■■■■□ 3.06
LHX1-205ENST00000621767 NUP160Q12769 1436 aa34.13■■■■□ 3.05
LHX1-205ENST00000621767 CEP170Q5SW79 1584 aa34.05■■■■□ 3.04
LHX1-205ENST00000621767 ERCC6L2Q5T890 1561 aa33.94■■■■□ 3.02
LHX1-205ENST00000621767 SHROOM2Q13796 1616 aa33.89■■■■□ 3.02
LHX1-205ENST00000621767 JPH4Q96JJ6 628 aa33.85■■■■□ 3.01
LHX1-205ENST00000621767 PRG4Q92954 1404 aaPredicted RBP33.8■■■■□ 3
LHX1-205ENST00000621767 KIF27Q86VH2 1401 aa33.79■■■■□ 3
LHX1-205ENST00000621767 IGF1RP08069 1367 aa33.78■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms