RNA–Protein interactions for RNA: ENST00000621640.1

GTF2I-220, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-220ENST00000621640 NISCHQ9Y2I1 1504 aa38.73■■■■□ 3.79
GTF2I-220ENST00000621640 ABCC9O60706 1549 aa34.79■■■■□ 3.16
GTF2I-220ENST00000621640 CCDC180Q9P1Z9 1646 aa34.76■■■■□ 3.15
GTF2I-220ENST00000621640 RB1CC1Q8TDY2 1594 aa33.09■■■□□ 2.89
GTF2I-220ENST00000621640 NACADO15069 1562 aa32.87■■■□□ 2.85
GTF2I-220ENST00000621640 DNAJC5BQ9UF47 199 aa32.68■■■□□ 2.82
GTF2I-220ENST00000621640 DCAF8L2P0C7V8 631 aa32.6■■■□□ 2.81
GTF2I-220ENST00000621640 MYO15BQ96JP2 1530 aa32.42■■■□□ 2.78
GTF2I-220ENST00000621640 PABPN1Q86U42 306 aaKnown RBP eCLIP32.37■■■□□ 2.77
GTF2I-220ENST00000621640 UNC13AQ9UPW8 1703 aa32.36■■■□□ 2.77
GTF2I-220ENST00000621640 BICRAQ9NZM4 1560 aa32.18■■■□□ 2.74
GTF2I-220ENST00000621640 ZCCHC6Q5VYS8 1495 aaKnown RBP32.11■■■□□ 2.73
GTF2I-220ENST00000621640 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
GTF2I-220ENST00000621640 SHROOM4Q9ULL8 1493 aa31.72■■■□□ 2.67
GTF2I-220ENST00000621640 SCRIBQ14160 1630 aa31.67■■■□□ 2.66
GTF2I-220ENST00000621640 CC2D2AQ9P2K1 1620 aa31.43■■■□□ 2.62
GTF2I-220ENST00000621640 EIF4G1Q04637 1599 aaKnown RBP31.36■■■□□ 2.61
GTF2I-220ENST00000621640 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
GTF2I-220ENST00000621640 NCAPD3P42695 1498 aa30.35■■■□□ 2.45
GTF2I-220ENST00000621640 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
GTF2I-220ENST00000621640 SMARCA4P51532 1647 aa30.22■■■□□ 2.43
GTF2I-220ENST00000621640 SMARCA2P51531 1590 aa30.15■■■□□ 2.42
GTF2I-220ENST00000621640 HMGXB3Q12766 1538 aa30.13■■■□□ 2.41
GTF2I-220ENST00000621640 BAZ1AQ9NRL2 1556 aaPredicted RBP30.05■■■□□ 2.4
GTF2I-220ENST00000621640 ERCC6Q03468 1493 aa30.01■■■□□ 2.4
GTF2I-220ENST00000621640 DNAJC5Q9H3Z4 198 aa30■■■□□ 2.39
GTF2I-220ENST00000621640 CUX2O14529 1486 aa29.99■■■□□ 2.39
GTF2I-220ENST00000621640 PEG3Q9GZU2 1588 aa29.94■■■□□ 2.38
GTF2I-220ENST00000621640 BAZ1BQ9UIG0 1483 aaKnown RBP29.94■■■□□ 2.38
GTF2I-220ENST00000621640 NESP48681 1621 aa29.89■■■□□ 2.38
GTF2I-220ENST00000621640 MROH2BQ7Z745 1585 aa29.86■■■□□ 2.37
GTF2I-220ENST00000621640 LAMC3Q9Y6N6 1575 aa29.65■■■□□ 2.34
GTF2I-220ENST00000621640 THOC2Q8NI27 1593 aaKnown RBP29.61■■■□□ 2.33
GTF2I-220ENST00000621640 KIF21AQ7Z4S6 1674 aa29.49■■■□□ 2.31
GTF2I-220ENST00000621640 WIZO95785 1651 aa29.47■■■□□ 2.31
GTF2I-220ENST00000621640 PDS5BQ9NTI5 1447 aa29.46■■■□□ 2.31
GTF2I-220ENST00000621640 CADPSQ9ULU8 1353 aa29.4■■■□□ 2.3
GTF2I-220ENST00000621640 MRC2Q9UBG0 1479 aa29.24■■■□□ 2.27
GTF2I-220ENST00000621640 RSF1Q96T23 1441 aaPredicted RBP29.21■■■□□ 2.27
GTF2I-220ENST00000621640 WDR62O43379 1518 aa29.2■■■□□ 2.26
GTF2I-220ENST00000621640 CEP164Q9UPV0 1460 aa29.11■■■□□ 2.25
GTF2I-220ENST00000621640 TOP2AP11388 1531 aaKnown RBP29.11■■■□□ 2.25
GTF2I-220ENST00000621640 CFTRP13569 1480 aa29.09■■■□□ 2.25
GTF2I-220ENST00000621640 FANCD2Q9BXW9 1451 aa29.09■■■□□ 2.25
GTF2I-220ENST00000621640 URB2Q14146 1524 aaKnown RBP28.88■■■□□ 2.21
GTF2I-220ENST00000621640 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
GTF2I-220ENST00000621640 PRDM2Q13029 1718 aa28.77■■■□□ 2.2
GTF2I-220ENST00000621640 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
GTF2I-220ENST00000621640 OSCARQ8IYS5 282 aa28.57■■■□□ 2.16
GTF2I-220ENST00000621640 TOPBP1Q92547 1522 aa28.54■■■□□ 2.16
GTF2I-220ENST00000621640 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
GTF2I-220ENST00000621640 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
GTF2I-220ENST00000621640 ABCC8Q09428 1581 aa28.43■■■□□ 2.14
GTF2I-220ENST00000621640 DNMBPQ6XZF7 1577 aa28.42■■■□□ 2.14
GTF2I-220ENST00000621640 EIF4G3O43432 1585 aaKnown RBP28.36■■■□□ 2.13
GTF2I-220ENST00000621640 TARBP1Q13395 1621 aaKnown RBP28.31■■■□□ 2.12
GTF2I-220ENST00000621640 RIMBP3CA6NJZ7 1639 aa28.26■■■□□ 2.11
GTF2I-220ENST00000621640 RIMBP3BA6NNM3 1639 aa28.26■■■□□ 2.11
GTF2I-220ENST00000621640 RIMBP3Q9UFD9 1639 aa28.26■■■□□ 2.11
GTF2I-220ENST00000621640 POLA1P09884 1462 aaPredicted RBP28.26■■■□□ 2.11
GTF2I-220ENST00000621640 AQRO60306 1485 aaKnown RBP eCLIP28.23■■■□□ 2.11
GTF2I-220ENST00000621640 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
GTF2I-220ENST00000621640 RAD54L2Q9Y4B4 1467 aa28.15■■■□□ 2.1
GTF2I-220ENST00000621640 CHD1O14646 1710 aa28.13■■■□□ 2.09
GTF2I-220ENST00000621640 SOGA1O94964 1423 aa28.09■■■□□ 2.09
GTF2I-220ENST00000621640 FGD5Q6ZNL6 1462 aa28.07■■■□□ 2.08
GTF2I-220ENST00000621640 CUX1P39880 1505 aa28.05■■■□□ 2.08
GTF2I-220ENST00000621640 TDRD9Q8NDG6 1382 aaKnown RBP28.05■■■□□ 2.08
GTF2I-220ENST00000621640 FBLN2P98095 1184 aa27.99■■■□□ 2.07
GTF2I-220ENST00000621640 WDR97A6NE52 1622 aa27.99■■■□□ 2.07
GTF2I-220ENST00000621640 SNAPC4Q5SXM2 1469 aa27.95■■■□□ 2.07
GTF2I-220ENST00000621640 ARAP1Q96P48 1450 aa27.91■■■□□ 2.06
GTF2I-220ENST00000621640 CYB5RLQ6IPT4 315 aa27.91■■■□□ 2.06
GTF2I-220ENST00000621640 MAGI1Q96QZ7 1491 aaPredicted RBP27.88■■■□□ 2.05
GTF2I-220ENST00000621640 GRIN2BQ13224 1484 aa27.86■■■□□ 2.05
GTF2I-220ENST00000621640 CLASP1Q7Z460 1538 aa27.85■■■□□ 2.05
GTF2I-220ENST00000621640 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
GTF2I-220ENST00000621640 CHMP7Q8WUX9 453 aaPredicted RBP27.79■■■□□ 2.04
GTF2I-220ENST00000621640 SYNJ2O15056 1496 aa27.78■■■□□ 2.04
GTF2I-220ENST00000621640 SYNJ1O43426 1573 aa27.77■■■□□ 2.04
GTF2I-220ENST00000621640 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.03
GTF2I-220ENST00000621640 PBRM1Q86U86 1689 aa27.75■■■□□ 2.03
GTF2I-220ENST00000621640 ABCA10Q8WWZ4 1543 aa27.75■■■□□ 2.03
GTF2I-220ENST00000621640 ABCA5Q8WWZ7 1642 aa27.73■■■□□ 2.03
GTF2I-220ENST00000621640 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
GTF2I-220ENST00000621640 TOP2BQ02880 1626 aa27.58■■■□□ 2.01
GTF2I-220ENST00000621640 BIVM-ERCC5R4GMW8 1640 aa27.58■■■□□ 2.01
GTF2I-220ENST00000621640 TRHP20396 242 aaPredicted RBP27.57■■■□□ 2
GTF2I-220ENST00000621640 GRIN2AQ12879 1464 aa27.52■■■□□ 2
GTF2I-220ENST00000621640 ADAMTS12P58397 1594 aa27.52■■■□□ 2
GTF2I-220ENST00000621640 CEP170Q5SW79 1584 aa27.44■■□□□ 1.98
GTF2I-220ENST00000621640 NUP160Q12769 1436 aa27.44■■□□□ 1.98
GTF2I-220ENST00000621640 ERCC6L2Q5T890 1561 aa27.42■■□□□ 1.98
GTF2I-220ENST00000621640 FHAD1B1AJZ9 1412 aa27.41■■□□□ 1.98
GTF2I-220ENST00000621640 ERICH3Q5RHP9 1530 aa27.39■■□□□ 1.98
GTF2I-220ENST00000621640 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
GTF2I-220ENST00000621640 PRG4Q92954 1404 aaPredicted RBP27.15■■□□□ 1.94
GTF2I-220ENST00000621640 RUSC2Q8N2Y8 1516 aa27.14■■□□□ 1.94
GTF2I-220ENST00000621640 JPH4Q96JJ6 628 aa27.1■■□□□ 1.93
GTF2I-220ENST00000621640 IGF1RP08069 1367 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms