RNA–Protein interactions for RNA: ENST00000621027.4

PHLDB1-228, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 2

Gene PHLDB1, Length 1,318 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-228ENST00000621027 NISCHQ9Y2I1 1504 aa37.93■■■■□ 3.66
PHLDB1-228ENST00000621027 CCDC180Q9P1Z9 1646 aa33.8■■■■□ 3
PHLDB1-228ENST00000621027 ABCC9O60706 1549 aa33.77■■■■□ 3
PHLDB1-228ENST00000621027 RB1CC1Q8TDY2 1594 aa32.16■■■□□ 2.74
PHLDB1-228ENST00000621027 NACADO15069 1562 aa31.97■■■□□ 2.71
PHLDB1-228ENST00000621027 DCAF8L2P0C7V8 631 aa31.96■■■□□ 2.71
PHLDB1-228ENST00000621027 DNAJC5BQ9UF47 199 aa31.63■■■□□ 2.65
PHLDB1-228ENST00000621027 MYO15BQ96JP2 1530 aa31.57■■■□□ 2.64
PHLDB1-228ENST00000621027 ZCCHC6Q5VYS8 1495 aaKnown RBP31.5■■■□□ 2.63
PHLDB1-228ENST00000621027 PABPN1Q86U42 306 aaKnown RBP eCLIP31.49■■■□□ 2.63
PHLDB1-228ENST00000621027 UNC13AQ9UPW8 1703 aa31.39■■■□□ 2.62
PHLDB1-228ENST00000621027 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
PHLDB1-228ENST00000621027 BICRAQ9NZM4 1560 aa31.23■■■□□ 2.59
PHLDB1-228ENST00000621027 SCRIBQ14160 1630 aa30.83■■■□□ 2.53
PHLDB1-228ENST00000621027 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
PHLDB1-228ENST00000621027 CC2D2AQ9P2K1 1620 aa30.49■■■□□ 2.47
PHLDB1-228ENST00000621027 EIF4G1Q04637 1599 aaKnown RBP30.46■■■□□ 2.47
PHLDB1-228ENST00000621027 CECR2Q9BXF3 1484 aa30.42■■■□□ 2.46
PHLDB1-228ENST00000621027 NCAPD3P42695 1498 aa29.54■■■□□ 2.32
PHLDB1-228ENST00000621027 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
PHLDB1-228ENST00000621027 SMARCA4P51532 1647 aa29.44■■■□□ 2.3
PHLDB1-228ENST00000621027 BAZ1AQ9NRL2 1556 aaPredicted RBP29.38■■■□□ 2.29
PHLDB1-228ENST00000621027 SMARCA2P51531 1590 aa29.36■■■□□ 2.29
PHLDB1-228ENST00000621027 HMGXB3Q12766 1538 aa29.29■■■□□ 2.28
PHLDB1-228ENST00000621027 MROH2BQ7Z745 1585 aa29.24■■■□□ 2.27
PHLDB1-228ENST00000621027 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
PHLDB1-228ENST00000621027 ERCC6Q03468 1493 aa29.15■■■□□ 2.26
PHLDB1-228ENST00000621027 PEG3Q9GZU2 1588 aa29.15■■■□□ 2.26
PHLDB1-228ENST00000621027 CUX2O14529 1486 aa29.06■■■□□ 2.24
PHLDB1-228ENST00000621027 NESP48681 1621 aa29.04■■■□□ 2.24
PHLDB1-228ENST00000621027 DNAJC5Q9H3Z4 198 aa28.98■■■□□ 2.23
PHLDB1-228ENST00000621027 WIZO95785 1651 aa28.89■■■□□ 2.22
PHLDB1-228ENST00000621027 RSF1Q96T23 1441 aaPredicted RBP28.85■■■□□ 2.21
PHLDB1-228ENST00000621027 LAMC3Q9Y6N6 1575 aa28.83■■■□□ 2.21
PHLDB1-228ENST00000621027 THOC2Q8NI27 1593 aaKnown RBP28.7■■■□□ 2.18
PHLDB1-228ENST00000621027 PDS5BQ9NTI5 1447 aa28.69■■■□□ 2.18
PHLDB1-228ENST00000621027 CADPSQ9ULU8 1353 aa28.65■■■□□ 2.18
PHLDB1-228ENST00000621027 KIF21AQ7Z4S6 1674 aa28.63■■■□□ 2.17
PHLDB1-228ENST00000621027 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
PHLDB1-228ENST00000621027 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
PHLDB1-228ENST00000621027 WDR62O43379 1518 aa28.34■■■□□ 2.13
PHLDB1-228ENST00000621027 CFTRP13569 1480 aa28.33■■■□□ 2.13
PHLDB1-228ENST00000621027 CEP164Q9UPV0 1460 aa28.33■■■□□ 2.13
PHLDB1-228ENST00000621027 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
PHLDB1-228ENST00000621027 CCDC88BA6NC98 1476 aa28.29■■■□□ 2.12
PHLDB1-228ENST00000621027 URB2Q14146 1524 aaKnown RBP28.07■■■□□ 2.08
PHLDB1-228ENST00000621027 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
PHLDB1-228ENST00000621027 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
PHLDB1-228ENST00000621027 OSCARQ8IYS5 282 aa27.79■■■□□ 2.04
PHLDB1-228ENST00000621027 TOPBP1Q92547 1522 aa27.78■■■□□ 2.04
PHLDB1-228ENST00000621027 IFT140Q96RY7 1462 aa27.77■■■□□ 2.04
PHLDB1-228ENST00000621027 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
PHLDB1-228ENST00000621027 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
PHLDB1-228ENST00000621027 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
PHLDB1-228ENST00000621027 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
PHLDB1-228ENST00000621027 EIF4G3O43432 1585 aaKnown RBP27.54■■■□□ 2
PHLDB1-228ENST00000621027 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
PHLDB1-228ENST00000621027 POLA1P09884 1462 aaPredicted RBP27.51■■□□□ 1.99
PHLDB1-228ENST00000621027 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.992e-8■■■■■ 35.8
PHLDB1-228ENST00000621027 SOGA1O94964 1423 aa27.43■■□□□ 1.98
PHLDB1-228ENST00000621027 CUX1P39880 1505 aa27.42■■□□□ 1.98
PHLDB1-228ENST00000621027 RAD54L2Q9Y4B4 1467 aa27.42■■□□□ 1.98
PHLDB1-228ENST00000621027 RIMBP3CA6NJZ7 1639 aa27.37■■□□□ 1.97
PHLDB1-228ENST00000621027 RIMBP3BA6NNM3 1639 aa27.37■■□□□ 1.97
PHLDB1-228ENST00000621027 RIMBP3Q9UFD9 1639 aa27.37■■□□□ 1.97
PHLDB1-228ENST00000621027 FGD5Q6ZNL6 1462 aa27.37■■□□□ 1.97
PHLDB1-228ENST00000621027 TDRD9Q8NDG6 1382 aaKnown RBP27.34■■□□□ 1.97
PHLDB1-228ENST00000621027 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
PHLDB1-228ENST00000621027 CHD1O14646 1710 aa27.3■■□□□ 1.96
PHLDB1-228ENST00000621027 FBLN2P98095 1184 aa27.3■■□□□ 1.96
PHLDB1-228ENST00000621027 WDR97A6NE52 1622 aa27.23■■□□□ 1.95
PHLDB1-228ENST00000621027 SNAPC4Q5SXM2 1469 aa27.19■■□□□ 1.94
PHLDB1-228ENST00000621027 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
PHLDB1-228ENST00000621027 CYB5RLQ6IPT4 315 aa27.14■■□□□ 1.93
PHLDB1-228ENST00000621027 GRIN2BQ13224 1484 aa27.13■■□□□ 1.93
PHLDB1-228ENST00000621027 CHMP7Q8WUX9 453 aaPredicted RBP27.12■■□□□ 1.93
PHLDB1-228ENST00000621027 MAGI1Q96QZ7 1491 aaPredicted RBP27.12■■□□□ 1.93
PHLDB1-228ENST00000621027 TOP2BQ02880 1626 aa27.1■■□□□ 1.93
PHLDB1-228ENST00000621027 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
PHLDB1-228ENST00000621027 SYNJ1O43426 1573 aa27.09■■□□□ 1.93
PHLDB1-228ENST00000621027 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
PHLDB1-228ENST00000621027 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
PHLDB1-228ENST00000621027 ARAP1Q96P48 1450 aa27.04■■□□□ 1.92
PHLDB1-228ENST00000621027 SYNJ2O15056 1496 aa27.03■■□□□ 1.92
PHLDB1-228ENST00000621027 CLASP1Q7Z460 1538 aa27.02■■□□□ 1.92
PHLDB1-228ENST00000621027 PBRM1Q86U86 1689 aa26.99■■□□□ 1.91
PHLDB1-228ENST00000621027 ABCA5Q8WWZ7 1642 aa26.97■■□□□ 1.91
PHLDB1-228ENST00000621027 TRHP20396 242 aaPredicted RBP26.81■■□□□ 1.88
PHLDB1-228ENST00000621027 GRIN2AQ12879 1464 aa26.78■■□□□ 1.88
PHLDB1-228ENST00000621027 ADAMTS12P58397 1594 aa26.76■■□□□ 1.87
PHLDB1-228ENST00000621027 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
PHLDB1-228ENST00000621027 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
PHLDB1-228ENST00000621027 NUP160Q12769 1436 aa26.7■■□□□ 1.86
PHLDB1-228ENST00000621027 CEP170Q5SW79 1584 aa26.67■■□□□ 1.86
PHLDB1-228ENST00000621027 KIF27Q86VH2 1401 aa26.66■■□□□ 1.86
PHLDB1-228ENST00000621027 IGF1RP08069 1367 aa26.63■■□□□ 1.85
PHLDB1-228ENST00000621027 ERCC6L2Q5T890 1561 aa26.61■■□□□ 1.85
PHLDB1-228ENST00000621027 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
PHLDB1-228ENST00000621027 JPH4Q96JJ6 628 aa26.46■■□□□ 1.83
PHLDB1-228ENST00000621027 CARMIL1Q5VZK9 1371 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms