RNA–Protein interactions for RNA: ENST00000620945.1

NUCB2-219, Transcript of nucleobindin 2, humanhuman

TSL 5

Gene NUCB2, Length 1,563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-219ENST00000620945 NISCHQ9Y2I1 1504 aa28.58■■■□□ 2.17
NUCB2-219ENST00000620945 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
NUCB2-219ENST00000620945 ABCC9O60706 1549 aa25.52■■□□□ 1.68
NUCB2-219ENST00000620945 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
NUCB2-219ENST00000620945 NACADO15069 1562 aa24.22■■□□□ 1.47
NUCB2-219ENST00000620945 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
NUCB2-219ENST00000620945 DCAF8L2P0C7V8 631 aa23.92■■□□□ 1.42
NUCB2-219ENST00000620945 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
NUCB2-219ENST00000620945 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
NUCB2-219ENST00000620945 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
NUCB2-219ENST00000620945 BICRAQ9NZM4 1560 aa23.66■■□□□ 1.38
NUCB2-219ENST00000620945 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
NUCB2-219ENST00000620945 DCAF1Q9Y4B6 1507 aa23.65■■□□□ 1.38
NUCB2-219ENST00000620945 SCRIBQ14160 1630 aa23.42■■□□□ 1.34
NUCB2-219ENST00000620945 SHROOM4Q9ULL8 1493 aa23.41■■□□□ 1.34
NUCB2-219ENST00000620945 CC2D2AQ9P2K1 1620 aa23.11■■□□□ 1.29
NUCB2-219ENST00000620945 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
NUCB2-219ENST00000620945 CECR2Q9BXF3 1484 aa22.98■■□□□ 1.27
NUCB2-219ENST00000620945 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
NUCB2-219ENST00000620945 NCAPD3P42695 1498 aa22.29■■□□□ 1.16
NUCB2-219ENST00000620945 SMARCA2P51531 1590 aa22.27■■□□□ 1.16
NUCB2-219ENST00000620945 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
NUCB2-219ENST00000620945 HMGXB3Q12766 1538 aa22.25■■□□□ 1.15
NUCB2-219ENST00000620945 BAZ1AQ9NRL2 1556 aaPredicted RBP22.23■■□□□ 1.15
NUCB2-219ENST00000620945 PEG3Q9GZU2 1588 aa22.12■■□□□ 1.13
NUCB2-219ENST00000620945 BAZ1BQ9UIG0 1483 aaKnown RBP22.1■■□□□ 1.13
NUCB2-219ENST00000620945 ERCC6Q03468 1493 aa22.06■■□□□ 1.12
NUCB2-219ENST00000620945 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
NUCB2-219ENST00000620945 CUX2O14529 1486 aa21.99■■□□□ 1.11
NUCB2-219ENST00000620945 NESP48681 1621 aa21.94■■□□□ 1.1
NUCB2-219ENST00000620945 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
NUCB2-219ENST00000620945 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
NUCB2-219ENST00000620945 WIZO95785 1651 aa21.81■■□□□ 1.08
NUCB2-219ENST00000620945 KIF21AQ7Z4S6 1674 aa21.78■■□□□ 1.08
NUCB2-219ENST00000620945 DNAJC5Q9H3Z4 198 aa21.7■■□□□ 1.06
NUCB2-219ENST00000620945 PDS5BQ9NTI5 1447 aa21.66■■□□□ 1.06
NUCB2-219ENST00000620945 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
NUCB2-219ENST00000620945 TOP2AP11388 1531 aaKnown RBP21.56■■□□□ 1.04
NUCB2-219ENST00000620945 RSF1Q96T23 1441 aaPredicted RBP21.56■■□□□ 1.04
NUCB2-219ENST00000620945 MRC2Q9UBG0 1479 aa21.52■■□□□ 1.04
NUCB2-219ENST00000620945 WDR62O43379 1518 aa21.5■■□□□ 1.03
NUCB2-219ENST00000620945 CEP164Q9UPV0 1460 aa21.47■■□□□ 1.03
NUCB2-219ENST00000620945 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
NUCB2-219ENST00000620945 CFTRP13569 1480 aa21.41■■□□□ 1.02
NUCB2-219ENST00000620945 PRDM2Q13029 1718 aa21.41■■□□□ 1.02
NUCB2-219ENST00000620945 URB2Q14146 1524 aaKnown RBP21.24■□□□□ 0.99
NUCB2-219ENST00000620945 CCDC88BA6NC98 1476 aa21.22■□□□□ 0.99
NUCB2-219ENST00000620945 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
NUCB2-219ENST00000620945 DNMBPQ6XZF7 1577 aa21.01■□□□□ 0.95
NUCB2-219ENST00000620945 IFT140Q96RY7 1462 aa21■□□□□ 0.95
NUCB2-219ENST00000620945 ABCC8Q09428 1581 aa20.97■□□□□ 0.95
NUCB2-219ENST00000620945 EIF4G3O43432 1585 aaKnown RBP20.96■□□□□ 0.95
NUCB2-219ENST00000620945 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
NUCB2-219ENST00000620945 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
NUCB2-219ENST00000620945 OSCARQ8IYS5 282 aa20.85■□□□□ 0.93
NUCB2-219ENST00000620945 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
NUCB2-219ENST00000620945 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
NUCB2-219ENST00000620945 CHD1O14646 1710 aa20.79■□□□□ 0.92
NUCB2-219ENST00000620945 RIMBP3CA6NJZ7 1639 aa20.75■□□□□ 0.91
NUCB2-219ENST00000620945 RIMBP3BA6NNM3 1639 aa20.75■□□□□ 0.91
NUCB2-219ENST00000620945 RIMBP3Q9UFD9 1639 aa20.75■□□□□ 0.91
NUCB2-219ENST00000620945 AQRO60306 1485 aaKnown RBP eCLIP20.73■□□□□ 0.91
NUCB2-219ENST00000620945 FGD5Q6ZNL6 1462 aa20.71■□□□□ 0.91
NUCB2-219ENST00000620945 WDR97A6NE52 1622 aa20.71■□□□□ 0.91
NUCB2-219ENST00000620945 CUX1P39880 1505 aa20.71■□□□□ 0.91
NUCB2-219ENST00000620945 RAD54L2Q9Y4B4 1467 aa20.7■□□□□ 0.9
NUCB2-219ENST00000620945 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
NUCB2-219ENST00000620945 SOGA1O94964 1423 aa20.65■□□□□ 0.9
NUCB2-219ENST00000620945 SNAPC4Q5SXM2 1469 aa20.6■□□□□ 0.89
NUCB2-219ENST00000620945 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
NUCB2-219ENST00000620945 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
NUCB2-219ENST00000620945 PBRM1Q86U86 1689 aa20.59■□□□□ 0.89
NUCB2-219ENST00000620945 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
NUCB2-219ENST00000620945 FBLN2P98095 1184 aa20.53■□□□□ 0.88
NUCB2-219ENST00000620945 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
NUCB2-219ENST00000620945 ABCA5Q8WWZ7 1642 aa20.52■□□□□ 0.87
NUCB2-219ENST00000620945 SYNJ1O43426 1573 aa20.5■□□□□ 0.87
NUCB2-219ENST00000620945 CLASP1Q7Z460 1538 aa20.49■□□□□ 0.87
NUCB2-219ENST00000620945 ABCA10Q8WWZ4 1543 aa20.47■□□□□ 0.87
NUCB2-219ENST00000620945 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
NUCB2-219ENST00000620945 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
NUCB2-219ENST00000620945 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
NUCB2-219ENST00000620945 GAPVD1Q14C86 1478 aa20.45■□□□□ 0.86
NUCB2-219ENST00000620945 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
NUCB2-219ENST00000620945 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
NUCB2-219ENST00000620945 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
NUCB2-219ENST00000620945 ADAMTS12P58397 1594 aa20.36■□□□□ 0.85
NUCB2-219ENST00000620945 CYB5RLQ6IPT4 315 aa20.35■□□□□ 0.85
NUCB2-219ENST00000620945 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
NUCB2-219ENST00000620945 ERICH3Q5RHP9 1530 aa20.24■□□□□ 0.83
NUCB2-219ENST00000620945 CEP170Q5SW79 1584 aa20.24■□□□□ 0.83
NUCB2-219ENST00000620945 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
NUCB2-219ENST00000620945 NUP160Q12769 1436 aa20.19■□□□□ 0.82
NUCB2-219ENST00000620945 SHROOM2Q13796 1616 aa20.17■□□□□ 0.82
NUCB2-219ENST00000620945 ERCC6L2Q5T890 1561 aa20.14■□□□□ 0.82
NUCB2-219ENST00000620945 TRHP20396 242 aaPredicted RBP20.12■□□□□ 0.81
NUCB2-219ENST00000620945 RUSC2Q8N2Y8 1516 aa20.09■□□□□ 0.81
NUCB2-219ENST00000620945 CUL7Q14999 1698 aa20.04■□□□□ 0.8
NUCB2-219ENST00000620945 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
NUCB2-219ENST00000620945 PRG4Q92954 1404 aaPredicted RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms