RNA–Protein interactions for RNA: ENST00000620876.4

LINC02028-220, Transcript of long intergenic non-protein coding RNA 2028, humanhuman

TSL 5

Gene LINC02028, Length 476 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02028-220ENST00000620876 NISCHQ9Y2I1 1504 aa39.65■■■■□ 3.94
LINC02028-220ENST00000620876 ABCC9O60706 1549 aa35.93■■■■□ 3.34
LINC02028-220ENST00000620876 CCDC180Q9P1Z9 1646 aa35.73■■■■□ 3.31
LINC02028-220ENST00000620876 RB1CC1Q8TDY2 1594 aa34.07■■■■□ 3.05
LINC02028-220ENST00000620876 DNAJC5BQ9UF47 199 aa34.05■■■■□ 3.04
LINC02028-220ENST00000620876 NACADO15069 1562 aa33.8■■■■□ 3
LINC02028-220ENST00000620876 UNC13AQ9UPW8 1703 aa33.41■■■□□ 2.94
LINC02028-220ENST00000620876 PABPN1Q86U42 306 aaKnown RBP eCLIP33.33■■■□□ 2.93
LINC02028-220ENST00000620876 MYO15BQ96JP2 1530 aa33.33■■■□□ 2.93
LINC02028-220ENST00000620876 BICRAQ9NZM4 1560 aa33.26■■■□□ 2.91
LINC02028-220ENST00000620876 DCAF8L2P0C7V8 631 aa33.24■■■□□ 2.91
LINC02028-220ENST00000620876 ZCCHC6Q5VYS8 1495 aaKnown RBP32.84■■■□□ 2.85
LINC02028-220ENST00000620876 DCAF1Q9Y4B6 1507 aa32.78■■■□□ 2.84
LINC02028-220ENST00000620876 SHROOM4Q9ULL8 1493 aa32.7■■■□□ 2.83
LINC02028-220ENST00000620876 CC2D2AQ9P2K1 1620 aa32.49■■■□□ 2.79
LINC02028-220ENST00000620876 SCRIBQ14160 1630 aa32.47■■■□□ 2.79
LINC02028-220ENST00000620876 CECR2Q9BXF3 1484 aa32.4■■■□□ 2.78
LINC02028-220ENST00000620876 EIF4G1Q04637 1599 aaKnown RBP32.37■■■□□ 2.77
LINC02028-220ENST00000620876 DNAJC5Q9H3Z4 198 aa31.4■■■□□ 2.62
LINC02028-220ENST00000620876 NCAPD3P42695 1498 aa31.24■■■□□ 2.59
LINC02028-220ENST00000620876 CUX2O14529 1486 aa31.12■■■□□ 2.57
LINC02028-220ENST00000620876 ATAD2BQ9ULI0 1458 aa31.09■■■□□ 2.57
LINC02028-220ENST00000620876 HMGXB3Q12766 1538 aa31■■■□□ 2.55
LINC02028-220ENST00000620876 SMARCA4P51532 1647 aa31■■■□□ 2.55
LINC02028-220ENST00000620876 SMARCA2P51531 1590 aa30.94■■■□□ 2.54
LINC02028-220ENST00000620876 ERCC6Q03468 1493 aa30.94■■■□□ 2.54
LINC02028-220ENST00000620876 NESP48681 1621 aa30.84■■■□□ 2.53
LINC02028-220ENST00000620876 PEG3Q9GZU2 1588 aa30.77■■■□□ 2.52
LINC02028-220ENST00000620876 BAZ1AQ9NRL2 1556 aaPredicted RBP30.75■■■□□ 2.51
LINC02028-220ENST00000620876 BAZ1BQ9UIG0 1483 aaKnown RBP30.7■■■□□ 2.5
LINC02028-220ENST00000620876 THOC2Q8NI27 1593 aaKnown RBP30.66■■■□□ 2.5
LINC02028-220ENST00000620876 MROH2BQ7Z745 1585 aa30.57■■■□□ 2.48
LINC02028-220ENST00000620876 LAMC3Q9Y6N6 1575 aa30.55■■■□□ 2.48
LINC02028-220ENST00000620876 KIF21AQ7Z4S6 1674 aa30.43■■■□□ 2.46
LINC02028-220ENST00000620876 PDS5BQ9NTI5 1447 aa30.3■■■□□ 2.44
LINC02028-220ENST00000620876 CADPSQ9ULU8 1353 aa30.21■■■□□ 2.43
LINC02028-220ENST00000620876 WIZO95785 1651 aa30.15■■■□□ 2.42
LINC02028-220ENST00000620876 WDR62O43379 1518 aa30.13■■■□□ 2.41
LINC02028-220ENST00000620876 MRC2Q9UBG0 1479 aa30.12■■■□□ 2.41
LINC02028-220ENST00000620876 CEP164Q9UPV0 1460 aa29.91■■■□□ 2.38
LINC02028-220ENST00000620876 CFTRP13569 1480 aa29.87■■■□□ 2.37
LINC02028-220ENST00000620876 FANCD2Q9BXW9 1451 aa29.87■■■□□ 2.37
LINC02028-220ENST00000620876 RSF1Q96T23 1441 aaPredicted RBP29.79■■■□□ 2.36
LINC02028-220ENST00000620876 TOP2AP11388 1531 aaKnown RBP29.76■■■□□ 2.35
LINC02028-220ENST00000620876 TRIM41Q8WV44 630 aa29.73■■■□□ 2.35
LINC02028-220ENST00000620876 URB2Q14146 1524 aaKnown RBP29.72■■■□□ 2.35
LINC02028-220ENST00000620876 PRDM2Q13029 1718 aa29.53■■■□□ 2.32
LINC02028-220ENST00000620876 OSCARQ8IYS5 282 aa29.49■■■□□ 2.31
LINC02028-220ENST00000620876 CCDC88BA6NC98 1476 aa29.4■■■□□ 2.3
LINC02028-220ENST00000620876 ZNF608Q9ULD9 1512 aaPredicted RBP29.39■■■□□ 2.3
LINC02028-220ENST00000620876 IFT140Q96RY7 1462 aa29.34■■■□□ 2.29
LINC02028-220ENST00000620876 RIMBP3CA6NJZ7 1639 aa29.31■■■□□ 2.28
LINC02028-220ENST00000620876 RIMBP3BA6NNM3 1639 aa29.31■■■□□ 2.28
LINC02028-220ENST00000620876 RIMBP3Q9UFD9 1639 aa29.31■■■□□ 2.28
LINC02028-220ENST00000620876 TOPBP1Q92547 1522 aa29.31■■■□□ 2.28
LINC02028-220ENST00000620876 EIF4G3O43432 1585 aaKnown RBP29.22■■■□□ 2.27
LINC02028-220ENST00000620876 ARHGEF11O15085 1522 aa29.2■■■□□ 2.26
LINC02028-220ENST00000620876 DNMBPQ6XZF7 1577 aa29.18■■■□□ 2.26
LINC02028-220ENST00000620876 TARBP1Q13395 1621 aaKnown RBP29.14■■■□□ 2.26
LINC02028-220ENST00000620876 ABCC8Q09428 1581 aa29.13■■■□□ 2.25
LINC02028-220ENST00000620876 CHD1O14646 1710 aa29.02■■■□□ 2.24
LINC02028-220ENST00000620876 AQRO60306 1485 aaKnown RBP eCLIP29.02■■■□□ 2.24
LINC02028-220ENST00000620876 POLA1P09884 1462 aaPredicted RBP29.01■■■□□ 2.23
LINC02028-220ENST00000620876 ARAP1Q96P48 1450 aa28.91■■■□□ 2.22
LINC02028-220ENST00000620876 RAD54L2Q9Y4B4 1467 aa28.87■■■□□ 2.21
LINC02028-220ENST00000620876 CYB5RLQ6IPT4 315 aa28.81■■■□□ 2.2
LINC02028-220ENST00000620876 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
LINC02028-220ENST00000620876 SOGA1O94964 1423 aa28.77■■■□□ 2.2
LINC02028-220ENST00000620876 TDRD9Q8NDG6 1382 aaKnown RBP28.76■■■□□ 2.2
LINC02028-220ENST00000620876 CLASP1Q7Z460 1538 aa28.76■■■□□ 2.19
LINC02028-220ENST00000620876 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
LINC02028-220ENST00000620876 SNAPC4Q5SXM2 1469 aa28.73■■■□□ 2.19
LINC02028-220ENST00000620876 CUX1P39880 1505 aa28.73■■■□□ 2.19
LINC02028-220ENST00000620876 FBLN2P98095 1184 aa28.68■■■□□ 2.18
LINC02028-220ENST00000620876 MAGI1Q96QZ7 1491 aaPredicted RBP28.64■■■□□ 2.17
LINC02028-220ENST00000620876 GRIN2BQ13224 1484 aa28.59■■■□□ 2.17
LINC02028-220ENST00000620876 SYNJ1O43426 1573 aa28.58■■■□□ 2.17
LINC02028-220ENST00000620876 SYNJ2O15056 1496 aa28.55■■■□□ 2.16
LINC02028-220ENST00000620876 PBRM1Q86U86 1689 aa28.5■■■□□ 2.15
LINC02028-220ENST00000620876 TRHP20396 242 aaPredicted RBP28.49■■■□□ 2.15
LINC02028-220ENST00000620876 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
LINC02028-220ENST00000620876 CHMP7Q8WUX9 453 aaPredicted RBP28.46■■■□□ 2.15
LINC02028-220ENST00000620876 ABCA10Q8WWZ4 1543 aa28.44■■■□□ 2.14
LINC02028-220ENST00000620876 GAPVD1Q14C86 1478 aa28.44■■■□□ 2.14
LINC02028-220ENST00000620876 ERCC6L2Q5T890 1561 aa28.29■■■□□ 2.12
LINC02028-220ENST00000620876 GRIN2AQ12879 1464 aa28.26■■■□□ 2.11
LINC02028-220ENST00000620876 ADAMTS12P58397 1594 aa28.25■■■□□ 2.11
LINC02028-220ENST00000620876 NUP160Q12769 1436 aa28.23■■■□□ 2.11
LINC02028-220ENST00000620876 CEP170Q5SW79 1584 aa28.22■■■□□ 2.11
LINC02028-220ENST00000620876 BIVM-ERCC5R4GMW8 1640 aa28.2■■■□□ 2.1
LINC02028-220ENST00000620876 TOP2BQ02880 1626 aa28.17■■■□□ 2.1
LINC02028-220ENST00000620876 SHROOM2Q13796 1616 aa28.17■■■□□ 2.1
LINC02028-220ENST00000620876 WRNQ14191 1432 aaPredicted RBP eCLIP28.16■■■□□ 2.1
LINC02028-220ENST00000620876 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
LINC02028-220ENST00000620876 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
LINC02028-220ENST00000620876 SUPT5HO00267 1087 aaKnown RBP27.99■■■□□ 2.07
LINC02028-220ENST00000620876 KIF13AQ9H1H9 1805 aa27.91■■■□□ 2.06
LINC02028-220ENST00000620876 RUSC2Q8N2Y8 1516 aa27.88■■■□□ 2.05
LINC02028-220ENST00000620876 PRG4Q92954 1404 aaPredicted RBP27.86■■■□□ 2.05
LINC02028-220ENST00000620876 AEBP2Q6ZN18 517 aaPredicted RBP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms