RNA–Protein interactions for RNA: ENST00000620694.1

THSD4-207, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 3

Gene THSD4, Length 416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-207ENST00000620694 NISCHQ9Y2I1 1504 aa58.91■■■■■ 7.02
THSD4-207ENST00000620694 CCDC180Q9P1Z9 1646 aa52.29■■■■■ 5.96
THSD4-207ENST00000620694 ABCC9O60706 1549 aa51.23■■■■■ 5.79
THSD4-207ENST00000620694 DCAF8L2P0C7V8 631 aa49.34■■■■■ 5.49
THSD4-207ENST00000620694 RB1CC1Q8TDY2 1594 aa49.26■■■■■ 5.48
THSD4-207ENST00000620694 NACADO15069 1562 aa49.21■■■■■ 5.47
THSD4-207ENST00000620694 ZCCHC6Q5VYS8 1495 aaKnown RBP49.08■■■■■ 5.45
THSD4-207ENST00000620694 MYO15BQ96JP2 1530 aa48.92■■■■■ 5.42
THSD4-207ENST00000620694 DCAF1Q9Y4B6 1507 aa48.73■■■■■ 5.39
THSD4-207ENST00000620694 UNC13AQ9UPW8 1703 aa48.01■■■■■ 5.28
THSD4-207ENST00000620694 PABPN1Q86U42 306 aaKnown RBP eCLIP47.93■■■■■ 5.26
THSD4-207ENST00000620694 SCRIBQ14160 1630 aa47.78■■■■■ 5.24
THSD4-207ENST00000620694 BICRAQ9NZM4 1560 aa47.72■■■■■ 5.23
THSD4-207ENST00000620694 SHROOM4Q9ULL8 1493 aa47.27■■■■■ 5.16
THSD4-207ENST00000620694 DNAJC5BQ9UF47 199 aa46.97■■■■■ 5.11
THSD4-207ENST00000620694 EIF4G1Q04637 1599 aaKnown RBP46.5■■■■■ 5.03
THSD4-207ENST00000620694 CC2D2AQ9P2K1 1620 aa46.29■■■■■ 5
THSD4-207ENST00000620694 CECR2Q9BXF3 1484 aa46.02■■■■■ 4.96
THSD4-207ENST00000620694 SMARCA4P51532 1647 aa45.67■■■■■ 4.9
THSD4-207ENST00000620694 BAZ1AQ9NRL2 1556 aaPredicted RBP45.67■■■■■ 4.9
THSD4-207ENST00000620694 ATAD2BQ9ULI0 1458 aa45.47■■■■■ 4.87
THSD4-207ENST00000620694 NCAPD3P42695 1498 aa45.42■■■■■ 4.86
THSD4-207ENST00000620694 MROH2BQ7Z745 1585 aa45.41■■■■■ 4.86
THSD4-207ENST00000620694 SMARCA2P51531 1590 aa45.4■■■■■ 4.86
THSD4-207ENST00000620694 PEG3Q9GZU2 1588 aa45.21■■■■■ 4.83
THSD4-207ENST00000620694 HMGXB3Q12766 1538 aa45.17■■■■■ 4.82
THSD4-207ENST00000620694 BAZ1BQ9UIG0 1483 aaKnown RBP45.1■■■■■ 4.81
THSD4-207ENST00000620694 RSF1Q96T23 1441 aaPredicted RBP44.93■■■■■ 4.78
THSD4-207ENST00000620694 WIZO95785 1651 aa44.89■■■■■ 4.78
THSD4-207ENST00000620694 TOP2AP11388 1531 aaKnown RBP44.45■■■■■ 4.71
THSD4-207ENST00000620694 NESP48681 1621 aa44.32■■■■■ 4.68
THSD4-207ENST00000620694 LAMC3Q9Y6N6 1575 aa44.19■■■■■ 4.66
THSD4-207ENST00000620694 ERCC6Q03468 1493 aa44.18■■■■■ 4.66
THSD4-207ENST00000620694 CADPSQ9ULU8 1353 aa44.14■■■■■ 4.66
THSD4-207ENST00000620694 PDS5BQ9NTI5 1447 aa43.97■■■■■ 4.63
THSD4-207ENST00000620694 CCDC88BA6NC98 1476 aa43.94■■■■■ 4.62
THSD4-207ENST00000620694 SUPT5HO00267 1087 aaKnown RBP43.91■■■■■ 4.62
THSD4-207ENST00000620694 CFTRP13569 1480 aa43.85■■■■■ 4.61
THSD4-207ENST00000620694 KIF21AQ7Z4S6 1674 aa43.72■■■■■ 4.59
THSD4-207ENST00000620694 CUX2O14529 1486 aa43.65■■■■■ 4.58
THSD4-207ENST00000620694 FANCD2Q9BXW9 1451 aa43.62■■■■■ 4.57
THSD4-207ENST00000620694 THOC2Q8NI27 1593 aaKnown RBP43.58■■■■■ 4.57
THSD4-207ENST00000620694 CEP164Q9UPV0 1460 aa43.57■■■■■ 4.56
THSD4-207ENST00000620694 MRC2Q9UBG0 1479 aa43.48■■■■■ 4.55
THSD4-207ENST00000620694 PRDM2Q13029 1718 aa43.39■■■■■ 4.54
THSD4-207ENST00000620694 WDR62O43379 1518 aa43.3■■■■■ 4.52
THSD4-207ENST00000620694 URB2Q14146 1524 aaKnown RBP43.16■■■■■ 4.5
THSD4-207ENST00000620694 ABCC8Q09428 1581 aa42.93■■■■■ 4.46
THSD4-207ENST00000620694 TOPBP1Q92547 1522 aa42.91■■■■■ 4.46
THSD4-207ENST00000620694 DNMBPQ6XZF7 1577 aa42.85■■■■■ 4.45
THSD4-207ENST00000620694 IFT140Q96RY7 1462 aa42.65■■■■■ 4.42
THSD4-207ENST00000620694 CUX1P39880 1505 aa42.6■■■■■ 4.41
THSD4-207ENST00000620694 POLA1P09884 1462 aaPredicted RBP42.55■■■■■ 4.4
THSD4-207ENST00000620694 FGD5Q6ZNL6 1462 aa42.47■■■■■ 4.39
THSD4-207ENST00000620694 ZNF608Q9ULD9 1512 aaPredicted RBP42.44■■■■■ 4.38
THSD4-207ENST00000620694 SOGA1O94964 1423 aa42.41■■■■■ 4.38
THSD4-207ENST00000620694 TARBP1Q13395 1621 aaKnown RBP42.38■■■■■ 4.38
THSD4-207ENST00000620694 WRNQ14191 1432 aaPredicted RBP eCLIP42.38■■■■■ 4.38
THSD4-207ENST00000620694 RAD54L2Q9Y4B4 1467 aa42.38■■■■■ 4.38
THSD4-207ENST00000620694 DNAJC5Q9H3Z4 198 aa42.29■■■■■ 4.36
THSD4-207ENST00000620694 EIF4G3O43432 1585 aaKnown RBP42.23■■■■■ 4.35
THSD4-207ENST00000620694 AQRO60306 1485 aaKnown RBP eCLIP42.23■■■■■ 4.35
THSD4-207ENST00000620694 TOP2BQ02880 1626 aa42.22■■■■■ 4.35
THSD4-207ENST00000620694 SYNJ1O43426 1573 aa42.22■■■■■ 4.35
THSD4-207ENST00000620694 BIVM-ERCC5R4GMW8 1640 aa42.19■■■■■ 4.34
THSD4-207ENST00000620694 TDRD9Q8NDG6 1382 aaKnown RBP42.17■■■■■ 4.34
THSD4-207ENST00000620694 WDR97A6NE52 1622 aa42.07■■■■■ 4.33
THSD4-207ENST00000620694 ABCA10Q8WWZ4 1543 aa42.05■■■■■ 4.32
THSD4-207ENST00000620694 OSCARQ8IYS5 282 aa41.92■■■■■ 4.3
THSD4-207ENST00000620694 GRIN2BQ13224 1484 aa41.91■■■■■ 4.3
THSD4-207ENST00000620694 GAPVD1Q14C86 1478 aa41.91■■■■■ 4.3
THSD4-207ENST00000620694 SNAPC4Q5SXM2 1469 aa41.84■■■■■ 4.29
THSD4-207ENST00000620694 ABCA5Q8WWZ7 1642 aa41.83■■■■■ 4.29
THSD4-207ENST00000620694 FBLN2P98095 1184 aa41.79■■■■■ 4.28
THSD4-207ENST00000620694 MAGI1Q96QZ7 1491 aaPredicted RBP41.77■■■■■ 4.28
THSD4-207ENST00000620694 PBRM1Q86U86 1689 aa41.72■■■■■ 4.27
THSD4-207ENST00000620694 CHMP7Q8WUX9 453 aaPredicted RBP41.67■■■■■ 4.26
THSD4-207ENST00000620694 CHD1O14646 1710 aa41.65■■■■■ 4.26
THSD4-207ENST00000620694 SYNJ2O15056 1496 aa41.61■■■■■ 4.25
THSD4-207ENST00000620694 ERICH3Q5RHP9 1530 aa41.54■■■■■ 4.24
THSD4-207ENST00000620694 KIF27Q86VH2 1401 aa41.51■■■■■ 4.24
THSD4-207ENST00000620694 TRIM41Q8WV44 630 aa41.47■■■■■ 4.23
THSD4-207ENST00000620694 ADAMTS12P58397 1594 aa41.45■■■■■ 4.23
THSD4-207ENST00000620694 FHAD1B1AJZ9 1412 aa41.44■■■■■ 4.23
THSD4-207ENST00000620694 GRIN2AQ12879 1464 aa41.34■■■■■ 4.21
THSD4-207ENST00000620694 IGF1RP08069 1367 aa41.32■■■■■ 4.21
THSD4-207ENST00000620694 CLASP1Q7Z460 1538 aa41.25■■■■■ 4.19
THSD4-207ENST00000620694 ARHGEF11O15085 1522 aa41.17■■■■■ 4.18
THSD4-207ENST00000620694 NUP160Q12769 1436 aa41.16■■■■■ 4.18
THSD4-207ENST00000620694 CUL7Q14999 1698 aa41.14■■■■■ 4.18
THSD4-207ENST00000620694 RIMBP3CA6NJZ7 1639 aa41.14■■■■■ 4.18
THSD4-207ENST00000620694 RIMBP3BA6NNM3 1639 aa41.14■■■■■ 4.18
THSD4-207ENST00000620694 RIMBP3Q9UFD9 1639 aa41.14■■■■■ 4.18
THSD4-207ENST00000620694 RUSC2Q8N2Y8 1516 aa41.11■■■■■ 4.17
THSD4-207ENST00000620694 CEP170Q5SW79 1584 aa41.11■■■■■ 4.17
THSD4-207ENST00000620694 CARMIL1Q5VZK9 1371 aa41.09■■■■■ 4.17
THSD4-207ENST00000620694 CHIC1Q5VXU3 224 aa40.96■■■■■ 4.15
THSD4-207ENST00000620694 CYB5RLQ6IPT4 315 aa40.86■■■■■ 4.13
THSD4-207ENST00000620694 ARAP1Q96P48 1450 aa40.84■■■■■ 4.13
THSD4-207ENST00000620694 RAPGEF2Q9Y4G8 1499 aa40.83■■■■■ 4.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms