RNA–Protein interactions for RNA: ENST00000620662.1

GTF2IRD2B-209, Transcript of GTF2I repeat domain containing 2B, humanhuman

TSL 2

Gene GTF2IRD2B, Length 1,298 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD2B-209ENST00000620662 NISCHQ9Y2I1 1504 aa44.91■■■■■ 4.78
GTF2IRD2B-209ENST00000620662 CCDC180Q9P1Z9 1646 aa40.28■■■■■ 4.04
GTF2IRD2B-209ENST00000620662 ABCC9O60706 1549 aa40.21■■■■■ 4.03
GTF2IRD2B-209ENST00000620662 RB1CC1Q8TDY2 1594 aa38.3■■■■□ 3.72
GTF2IRD2B-209ENST00000620662 NACADO15069 1562 aa38.04■■■■□ 3.68
GTF2IRD2B-209ENST00000620662 DCAF8L2P0C7V8 631 aa37.97■■■■□ 3.67
GTF2IRD2B-209ENST00000620662 DNAJC5BQ9UF47 199 aa37.59■■■■□ 3.61
GTF2IRD2B-209ENST00000620662 UNC13AQ9UPW8 1703 aa37.54■■■■□ 3.6
GTF2IRD2B-209ENST00000620662 MYO15BQ96JP2 1530 aa37.47■■■■□ 3.59
GTF2IRD2B-209ENST00000620662 PABPN1Q86U42 306 aaKnown RBP eCLIP37.46■■■■□ 3.59
GTF2IRD2B-209ENST00000620662 ZCCHC6Q5VYS8 1495 aaKnown RBP37.22■■■■□ 3.55
GTF2IRD2B-209ENST00000620662 BICRAQ9NZM4 1560 aa37.17■■■■□ 3.54
GTF2IRD2B-209ENST00000620662 DCAF1Q9Y4B6 1507 aa37.05■■■■□ 3.52
GTF2IRD2B-209ENST00000620662 SCRIBQ14160 1630 aa36.77■■■■□ 3.48
GTF2IRD2B-209ENST00000620662 SHROOM4Q9ULL8 1493 aa36.6■■■■□ 3.45
GTF2IRD2B-209ENST00000620662 CC2D2AQ9P2K1 1620 aa36.34■■■■□ 3.41
GTF2IRD2B-209ENST00000620662 EIF4G1Q04637 1599 aaKnown RBP36.26■■■■□ 3.39
GTF2IRD2B-209ENST00000620662 CECR2Q9BXF3 1484 aa36.19■■■■□ 3.38
GTF2IRD2B-209ENST00000620662 NCAPD3P42695 1498 aa35.08■■■■□ 3.21
GTF2IRD2B-209ENST00000620662 SMARCA4P51532 1647 aa35.04■■■■□ 3.2
GTF2IRD2B-209ENST00000620662 ATAD2BQ9ULI0 1458 aa35.02■■■■□ 3.2
GTF2IRD2B-209ENST00000620662 SMARCA2P51531 1590 aa34.93■■■■□ 3.18
GTF2IRD2B-209ENST00000620662 BAZ1AQ9NRL2 1556 aaPredicted RBP34.87■■■■□ 3.17
GTF2IRD2B-209ENST00000620662 HMGXB3Q12766 1538 aa34.85■■■■□ 3.17
GTF2IRD2B-209ENST00000620662 ERCC6Q03468 1493 aa34.72■■■■□ 3.15
GTF2IRD2B-209ENST00000620662 BAZ1BQ9UIG0 1483 aaKnown RBP34.71■■■■□ 3.15
GTF2IRD2B-209ENST00000620662 PEG3Q9GZU2 1588 aa34.65■■■■□ 3.14
GTF2IRD2B-209ENST00000620662 MROH2BQ7Z745 1585 aa34.62■■■■□ 3.13
GTF2IRD2B-209ENST00000620662 NESP48681 1621 aa34.57■■■■□ 3.12
GTF2IRD2B-209ENST00000620662 CUX2O14529 1486 aa34.57■■■■□ 3.12
GTF2IRD2B-209ENST00000620662 DNAJC5Q9H3Z4 198 aa34.43■■■■□ 3.1
GTF2IRD2B-209ENST00000620662 LAMC3Q9Y6N6 1575 aa34.32■■■■□ 3.08
GTF2IRD2B-209ENST00000620662 WIZO95785 1651 aa34.27■■■■□ 3.08
GTF2IRD2B-209ENST00000620662 THOC2Q8NI27 1593 aaKnown RBP34.19■■■■□ 3.06
GTF2IRD2B-209ENST00000620662 KIF21AQ7Z4S6 1674 aa34.19■■■■□ 3.06
GTF2IRD2B-209ENST00000620662 PDS5BQ9NTI5 1447 aa34.11■■■■□ 3.05
GTF2IRD2B-209ENST00000620662 CADPSQ9ULU8 1353 aa34.04■■■■□ 3.04
GTF2IRD2B-209ENST00000620662 RSF1Q96T23 1441 aaPredicted RBP33.91■■■■□ 3.02
GTF2IRD2B-209ENST00000620662 MRC2Q9UBG0 1479 aa33.82■■■■□ 3
GTF2IRD2B-209ENST00000620662 TOP2AP11388 1531 aaKnown RBP33.79■■■■□ 3
GTF2IRD2B-209ENST00000620662 WDR62O43379 1518 aa33.73■■■□□ 2.99
GTF2IRD2B-209ENST00000620662 CEP164Q9UPV0 1460 aa33.71■■■□□ 2.99
GTF2IRD2B-209ENST00000620662 FANCD2Q9BXW9 1451 aa33.68■■■□□ 2.98
GTF2IRD2B-209ENST00000620662 CFTRP13569 1480 aa33.66■■■□□ 2.98
GTF2IRD2B-209ENST00000620662 PRDM2Q13029 1718 aa33.48■■■□□ 2.95
GTF2IRD2B-209ENST00000620662 CCDC88BA6NC98 1476 aa33.4■■■□□ 2.94
GTF2IRD2B-209ENST00000620662 URB2Q14146 1524 aaKnown RBP33.39■■■□□ 2.94
GTF2IRD2B-209ENST00000620662 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
GTF2IRD2B-209ENST00000620662 TOPBP1Q92547 1522 aa33.06■■■□□ 2.88
GTF2IRD2B-209ENST00000620662 OSCARQ8IYS5 282 aa33.03■■■□□ 2.88
GTF2IRD2B-209ENST00000620662 IFT140Q96RY7 1462 aa33.02■■■□□ 2.88
GTF2IRD2B-209ENST00000620662 ZNF608Q9ULD9 1512 aaPredicted RBP32.97■■■□□ 2.87
GTF2IRD2B-209ENST00000620662 ABCC8Q09428 1581 aa32.97■■■□□ 2.87
GTF2IRD2B-209ENST00000620662 DNMBPQ6XZF7 1577 aa32.95■■■□□ 2.86
GTF2IRD2B-209ENST00000620662 EIF4G3O43432 1585 aaKnown RBP32.82■■■□□ 2.84
GTF2IRD2B-209ENST00000620662 TARBP1Q13395 1621 aaKnown RBP32.76■■■□□ 2.83
GTF2IRD2B-209ENST00000620662 POLA1P09884 1462 aaPredicted RBP32.72■■■□□ 2.83
GTF2IRD2B-209ENST00000620662 AQRO60306 1485 aaKnown RBP eCLIP32.69■■■□□ 2.82
GTF2IRD2B-209ENST00000620662 RIMBP3CA6NJZ7 1639 aa32.63■■■□□ 2.81
GTF2IRD2B-209ENST00000620662 RIMBP3BA6NNM3 1639 aa32.63■■■□□ 2.81
GTF2IRD2B-209ENST00000620662 RIMBP3Q9UFD9 1639 aa32.63■■■□□ 2.81
GTF2IRD2B-209ENST00000620662 CHD1O14646 1710 aa32.63■■■□□ 2.81
GTF2IRD2B-209ENST00000620662 RAD54L2Q9Y4B4 1467 aa32.62■■■□□ 2.81
GTF2IRD2B-209ENST00000620662 SUPT5HO00267 1087 aaKnown RBP32.58■■■□□ 2.81
GTF2IRD2B-209ENST00000620662 SOGA1O94964 1423 aa32.58■■■□□ 2.81
GTF2IRD2B-209ENST00000620662 FGD5Q6ZNL6 1462 aa32.54■■■□□ 2.8
GTF2IRD2B-209ENST00000620662 CUX1P39880 1505 aa32.52■■■□□ 2.8
GTF2IRD2B-209ENST00000620662 TDRD9Q8NDG6 1382 aaKnown RBP32.51■■■□□ 2.79
GTF2IRD2B-209ENST00000620662 FBLN2P98095 1184 aa32.51■■■□□ 2.79
GTF2IRD2B-209ENST00000620662 ARHGEF11O15085 1522 aa32.51■■■□□ 2.79
GTF2IRD2B-209ENST00000620662 WDR97A6NE52 1622 aa32.4■■■□□ 2.78
GTF2IRD2B-209ENST00000620662 SNAPC4Q5SXM2 1469 aa32.36■■■□□ 2.77
GTF2IRD2B-209ENST00000620662 CYB5RLQ6IPT4 315 aa32.28■■■□□ 2.76
GTF2IRD2B-209ENST00000620662 GRIN2BQ13224 1484 aa32.27■■■□□ 2.76
GTF2IRD2B-209ENST00000620662 PBRM1Q86U86 1689 aa32.25■■■□□ 2.75
GTF2IRD2B-209ENST00000620662 MAGI1Q96QZ7 1491 aaPredicted RBP32.25■■■□□ 2.75
GTF2IRD2B-209ENST00000620662 CHMP7Q8WUX9 453 aaPredicted RBP32.25■■■□□ 2.75
GTF2IRD2B-209ENST00000620662 GAPVD1Q14C86 1478 aa32.19■■■□□ 2.74
GTF2IRD2B-209ENST00000620662 ARAP1Q96P48 1450 aa32.18■■■□□ 2.74
GTF2IRD2B-209ENST00000620662 SYNJ1O43426 1573 aa32.18■■■□□ 2.74
GTF2IRD2B-209ENST00000620662 SYNJ2O15056 1496 aa32.15■■■□□ 2.74
GTF2IRD2B-209ENST00000620662 CLASP1Q7Z460 1538 aa32.15■■■□□ 2.74
GTF2IRD2B-209ENST00000620662 ABCA10Q8WWZ4 1543 aa32.15■■■□□ 2.74
GTF2IRD2B-209ENST00000620662 ABCA5Q8WWZ7 1642 aa32.12■■■□□ 2.73
GTF2IRD2B-209ENST00000620662 BIVM-ERCC5R4GMW8 1640 aa32.05■■■□□ 2.72
GTF2IRD2B-209ENST00000620662 WRNQ14191 1432 aaPredicted RBP eCLIP32.04■■■□□ 2.72
GTF2IRD2B-209ENST00000620662 TOP2BQ02880 1626 aa32.04■■■□□ 2.72
GTF2IRD2B-209ENST00000620662 TRHP20396 242 aaPredicted RBP31.93■■■□□ 2.7
GTF2IRD2B-209ENST00000620662 ADAMTS12P58397 1594 aa31.88■■■□□ 2.69
GTF2IRD2B-209ENST00000620662 GRIN2AQ12879 1464 aa31.86■■■□□ 2.69
GTF2IRD2B-209ENST00000620662 CEP170Q5SW79 1584 aa31.77■■■□□ 2.68
GTF2IRD2B-209ENST00000620662 FHAD1B1AJZ9 1412 aa31.76■■■□□ 2.68
GTF2IRD2B-209ENST00000620662 ERICH3Q5RHP9 1530 aa31.75■■■□□ 2.67
GTF2IRD2B-209ENST00000620662 NUP160Q12769 1436 aa31.73■■■□□ 2.67
GTF2IRD2B-209ENST00000620662 ERCC6L2Q5T890 1561 aa31.69■■■□□ 2.66
GTF2IRD2B-209ENST00000620662 SHROOM2Q13796 1616 aa31.6■■■□□ 2.65
GTF2IRD2B-209ENST00000620662 PRG4Q92954 1404 aaPredicted RBP31.45■■■□□ 2.63
GTF2IRD2B-209ENST00000620662 JPH4Q96JJ6 628 aa31.43■■■□□ 2.62
GTF2IRD2B-209ENST00000620662 RUSC2Q8N2Y8 1516 aa31.42■■■□□ 2.62
GTF2IRD2B-209ENST00000620662 KIF27Q86VH2 1401 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms