RNA–Protein interactions for RNA: ENST00000620580.1

LINC00649-218, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 779 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-218ENST00000620580 NISCHQ9Y2I1 1504 aa28.28■■■□□ 2.12
LINC00649-218ENST00000620580 ABCC9O60706 1549 aa25.25■■□□□ 1.63
LINC00649-218ENST00000620580 CCDC180Q9P1Z9 1646 aa25.23■■□□□ 1.63
LINC00649-218ENST00000620580 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
LINC00649-218ENST00000620580 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
LINC00649-218ENST00000620580 NACADO15069 1562 aa23.86■■□□□ 1.41
LINC00649-218ENST00000620580 DNAJC5BQ9UF47 199 aa23.65■■□□□ 1.38
LINC00649-218ENST00000620580 PABPN1Q86U42 306 aaKnown RBP eCLIP23.6■■□□□ 1.37
LINC00649-218ENST00000620580 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
LINC00649-218ENST00000620580 UNC13AQ9UPW8 1703 aa23.47■■□□□ 1.35
LINC00649-218ENST00000620580 ZCCHC6Q5VYS8 1495 aaKnown RBP23.46■■□□□ 1.35
LINC00649-218ENST00000620580 BICRAQ9NZM4 1560 aa23.35■■□□□ 1.33
LINC00649-218ENST00000620580 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
LINC00649-218ENST00000620580 SCRIBQ14160 1630 aa23.1■■□□□ 1.29
LINC00649-218ENST00000620580 SHROOM4Q9ULL8 1493 aa22.91■■□□□ 1.26
LINC00649-218ENST00000620580 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
LINC00649-218ENST00000620580 EIF4G1Q04637 1599 aaKnown RBP22.74■■□□□ 1.23
LINC00649-218ENST00000620580 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
LINC00649-218ENST00000620580 NCAPD3P42695 1498 aa22.06■■□□□ 1.12
LINC00649-218ENST00000620580 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
LINC00649-218ENST00000620580 SMARCA4P51532 1647 aa22.02■■□□□ 1.11
LINC00649-218ENST00000620580 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
LINC00649-218ENST00000620580 BAZ1AQ9NRL2 1556 aaPredicted RBP21.91■■□□□ 1.1
LINC00649-218ENST00000620580 HMGXB3Q12766 1538 aa21.86■■□□□ 1.09
LINC00649-218ENST00000620580 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
LINC00649-218ENST00000620580 BAZ1BQ9UIG0 1483 aaKnown RBP21.81■■□□□ 1.08
LINC00649-218ENST00000620580 PEG3Q9GZU2 1588 aa21.77■■□□□ 1.08
LINC00649-218ENST00000620580 NESP48681 1621 aa21.74■■□□□ 1.07
LINC00649-218ENST00000620580 ERCC6Q03468 1493 aa21.74■■□□□ 1.07
LINC00649-218ENST00000620580 CUX2O14529 1486 aa21.6■■□□□ 1.05
LINC00649-218ENST00000620580 WIZO95785 1651 aa21.57■■□□□ 1.04
LINC00649-218ENST00000620580 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
LINC00649-218ENST00000620580 LAMC3Q9Y6N6 1575 aa21.49■■□□□ 1.03
LINC00649-218ENST00000620580 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
LINC00649-218ENST00000620580 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
LINC00649-218ENST00000620580 THOC2Q8NI27 1593 aaKnown RBP21.4■■□□□ 1.02
LINC00649-218ENST00000620580 PDS5BQ9NTI5 1447 aa21.4■■□□□ 1.02
LINC00649-218ENST00000620580 KIF21AQ7Z4S6 1674 aa21.4■■□□□ 1.02
LINC00649-218ENST00000620580 TOP2AP11388 1531 aaKnown RBP21.26■□□□□ 0.99
LINC00649-218ENST00000620580 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
LINC00649-218ENST00000620580 CFTRP13569 1480 aa21.19■□□□□ 0.98
LINC00649-218ENST00000620580 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
LINC00649-218ENST00000620580 WDR62O43379 1518 aa21.15■□□□□ 0.98
LINC00649-218ENST00000620580 CEP164Q9UPV0 1460 aa21.15■□□□□ 0.98
LINC00649-218ENST00000620580 CCDC88BA6NC98 1476 aa21.08■□□□□ 0.97
LINC00649-218ENST00000620580 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
LINC00649-218ENST00000620580 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
LINC00649-218ENST00000620580 TOPBP1Q92547 1522 aa20.79■□□□□ 0.92
LINC00649-218ENST00000620580 ZNF608Q9ULD9 1512 aaPredicted RBP20.75■□□□□ 0.91
LINC00649-218ENST00000620580 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
LINC00649-218ENST00000620580 OSCARQ8IYS5 282 aa20.72■□□□□ 0.91
LINC00649-218ENST00000620580 TRIM41Q8WV44 630 aa20.7■□□□□ 0.9
LINC00649-218ENST00000620580 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
LINC00649-218ENST00000620580 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
LINC00649-218ENST00000620580 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
LINC00649-218ENST00000620580 AQRO60306 1485 aaKnown RBP eCLIP20.59■□□□□ 0.89
LINC00649-218ENST00000620580 POLA1P09884 1462 aaPredicted RBP20.59■□□□□ 0.89
LINC00649-218ENST00000620580 TARBP1Q13395 1621 aaKnown RBP20.57■□□□□ 0.88
LINC00649-218ENST00000620580 EIF4G3O43432 1585 aaKnown RBP20.57■□□□□ 0.88
LINC00649-218ENST00000620580 RAD54L2Q9Y4B4 1467 aa20.56■□□□□ 0.88
LINC00649-218ENST00000620580 SOGA1O94964 1423 aa20.52■□□□□ 0.87
LINC00649-218ENST00000620580 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
LINC00649-218ENST00000620580 CUX1P39880 1505 aa20.49■□□□□ 0.87
LINC00649-218ENST00000620580 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
LINC00649-218ENST00000620580 FBLN2P98095 1184 aa20.45■□□□□ 0.86
LINC00649-218ENST00000620580 RIMBP3CA6NJZ7 1639 aa20.4■□□□□ 0.86
LINC00649-218ENST00000620580 RIMBP3BA6NNM3 1639 aa20.4■□□□□ 0.86
LINC00649-218ENST00000620580 CHD1O14646 1710 aa20.4■□□□□ 0.86
LINC00649-218ENST00000620580 RIMBP3Q9UFD9 1639 aa20.4■□□□□ 0.86
LINC00649-218ENST00000620580 ARHGEF11O15085 1522 aa20.36■□□□□ 0.85
LINC00649-218ENST00000620580 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
LINC00649-218ENST00000620580 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
LINC00649-218ENST00000620580 CHMP7Q8WUX9 453 aaPredicted RBP20.28■□□□□ 0.84
LINC00649-218ENST00000620580 GRIN2BQ13224 1484 aa20.28■□□□□ 0.84
LINC00649-218ENST00000620580 WDR97A6NE52 1622 aa20.27■□□□□ 0.84
LINC00649-218ENST00000620580 GAPVD1Q14C86 1478 aa20.24■□□□□ 0.83
LINC00649-218ENST00000620580 MAGI1Q96QZ7 1491 aaPredicted RBP20.24■□□□□ 0.83
LINC00649-218ENST00000620580 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
LINC00649-218ENST00000620580 WRNQ14191 1432 aaPredicted RBP eCLIP20.19■□□□□ 0.82
LINC00649-218ENST00000620580 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
LINC00649-218ENST00000620580 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
LINC00649-218ENST00000620580 SYNJ1O43426 1573 aa20.18■□□□□ 0.82
LINC00649-218ENST00000620580 PBRM1Q86U86 1689 aa20.18■□□□□ 0.82
LINC00649-218ENST00000620580 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
LINC00649-218ENST00000620580 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
LINC00649-218ENST00000620580 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
LINC00649-218ENST00000620580 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.81
LINC00649-218ENST00000620580 GRIN2AQ12879 1464 aa20.03■□□□□ 0.8
LINC00649-218ENST00000620580 ADAMTS12P58397 1594 aa20.01■□□□□ 0.79
LINC00649-218ENST00000620580 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
LINC00649-218ENST00000620580 FHAD1B1AJZ9 1412 aa19.98■□□□□ 0.79
LINC00649-218ENST00000620580 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
LINC00649-218ENST00000620580 NUP160Q12769 1436 aa19.96■□□□□ 0.79
LINC00649-218ENST00000620580 ERICH3Q5RHP9 1530 aa19.95■□□□□ 0.78
LINC00649-218ENST00000620580 ERCC6L2Q5T890 1561 aa19.94■□□□□ 0.78
LINC00649-218ENST00000620580 IGF1RP08069 1367 aa19.83■□□□□ 0.76
LINC00649-218ENST00000620580 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
LINC00649-218ENST00000620580 JPH4Q96JJ6 628 aa19.81■□□□□ 0.76
LINC00649-218ENST00000620580 KIF27Q86VH2 1401 aa19.79■□□□□ 0.76
LINC00649-218ENST00000620580 PRG4Q92954 1404 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms