RNA–Protein interactions for RNA: ENST00000620515.1

DDB2-214, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 3

Gene DDB2, Length 347 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-214ENST00000620515 NISCHQ9Y2I1 1504 aa18.33■□□□□ 0.52
DDB2-214ENST00000620515 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
DDB2-214ENST00000620515 ZCCHC6Q5VYS8 1495 aaKnown RBP15.38■□□□□ 0.05
DDB2-214ENST00000620515 ABCC9O60706 1549 aa15.33■□□□□ 0.04
DDB2-214ENST00000620515 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
DDB2-214ENST00000620515 MYO15BQ96JP2 1530 aa15.1■□□□□ 0.01
DDB2-214ENST00000620515 NACADO15069 1562 aa15□□□□□ -0.01
DDB2-214ENST00000620515 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
DDB2-214ENST00000620515 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
DDB2-214ENST00000620515 SCRIBQ14160 1630 aa14.71□□□□□ -0.05
DDB2-214ENST00000620515 UNC13AQ9UPW8 1703 aa14.69□□□□□ -0.06
DDB2-214ENST00000620515 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
DDB2-214ENST00000620515 BICRAQ9NZM4 1560 aa14.6□□□□□ -0.07
DDB2-214ENST00000620515 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
DDB2-214ENST00000620515 CECR2Q9BXF3 1484 aa14.28□□□□□ -0.12
DDB2-214ENST00000620515 MROH2BQ7Z745 1585 aa14.17□□□□□ -0.14
DDB2-214ENST00000620515 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
DDB2-214ENST00000620515 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
DDB2-214ENST00000620515 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
DDB2-214ENST00000620515 EIF4G1Q04637 1599 aaKnown RBP14.08□□□□□ -0.16
DDB2-214ENST00000620515 PEG3Q9GZU2 1588 aa14.03□□□□□ -0.16
DDB2-214ENST00000620515 WIZO95785 1651 aa14.02□□□□□ -0.16
DDB2-214ENST00000620515 ATAD2BQ9ULI0 1458 aa13.95□□□□□ -0.18
DDB2-214ENST00000620515 CC2D2AQ9P2K1 1620 aa13.92□□□□□ -0.18
DDB2-214ENST00000620515 SUPT5HO00267 1087 aaKnown RBP13.91□□□□□ -0.18
DDB2-214ENST00000620515 SMARCA2P51531 1590 aa13.89□□□□□ -0.19
DDB2-214ENST00000620515 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
DDB2-214ENST00000620515 TOP2AP11388 1531 aaKnown RBP13.86□□□□□ -0.19
DDB2-214ENST00000620515 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
DDB2-214ENST00000620515 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
DDB2-214ENST00000620515 BAZ1BQ9UIG0 1483 aaKnown RBP13.78□□□□□ -0.2
DDB2-214ENST00000620515 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
DDB2-214ENST00000620515 CFTRP13569 1480 aa13.5□□□□□ -0.25
DDB2-214ENST00000620515 NESP48681 1621 aa13.45□□□□□ -0.26
DDB2-214ENST00000620515 CADPSQ9ULU8 1353 aa13.45□□□□□ -0.26
DDB2-214ENST00000620515 PRDM2Q13029 1718 aa13.43□□□□□ -0.26
DDB2-214ENST00000620515 LAMC3Q9Y6N6 1575 aa13.41□□□□□ -0.26
DDB2-214ENST00000620515 ABCC8Q09428 1581 aa13.33□□□□□ -0.28
DDB2-214ENST00000620515 CHIC1Q5VXU3 224 aa13.33□□□□□ -0.28
DDB2-214ENST00000620515 FANCD2Q9BXW9 1451 aa13.29□□□□□ -0.28
DDB2-214ENST00000620515 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
DDB2-214ENST00000620515 SYNJ1O43426 1573 aa13.28□□□□□ -0.28
DDB2-214ENST00000620515 CUX1P39880 1505 aa13.26□□□□□ -0.29
DDB2-214ENST00000620515 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
DDB2-214ENST00000620515 WRNQ14191 1432 aaPredicted RBP eCLIP13.23□□□□□ -0.29
DDB2-214ENST00000620515 PDS5BQ9NTI5 1447 aa13.23□□□□□ -0.29
DDB2-214ENST00000620515 TOP2BQ02880 1626 aa13.22□□□□□ -0.29
DDB2-214ENST00000620515 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
DDB2-214ENST00000620515 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.3
DDB2-214ENST00000620515 THOC2Q8NI27 1593 aaKnown RBP13.18□□□□□ -0.3
DDB2-214ENST00000620515 DNMBPQ6XZF7 1577 aa13.17□□□□□ -0.3
DDB2-214ENST00000620515 TOPBP1Q92547 1522 aa13.16□□□□□ -0.3
DDB2-214ENST00000620515 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
DDB2-214ENST00000620515 WDR62O43379 1518 aa13.13□□□□□ -0.31
DDB2-214ENST00000620515 FGD5Q6ZNL6 1462 aa13.1□□□□□ -0.31
DDB2-214ENST00000620515 POLA1P09884 1462 aaPredicted RBP13.09□□□□□ -0.31
DDB2-214ENST00000620515 TRIM41Q8WV44 630 aa13.08□□□□□ -0.32
DDB2-214ENST00000620515 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
DDB2-214ENST00000620515 CUX2O14529 1486 aa13.06□□□□□ -0.32
DDB2-214ENST00000620515 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
DDB2-214ENST00000620515 RUSC2Q8N2Y8 1516 aa13.04□□□□□ -0.32
DDB2-214ENST00000620515 TARBP1Q13395 1621 aaKnown RBP13.04□□□□□ -0.32
DDB2-214ENST00000620515 SOGA1O94964 1423 aa13.03□□□□□ -0.32
DDB2-214ENST00000620515 RAD54L2Q9Y4B4 1467 aa13.03□□□□□ -0.32
DDB2-214ENST00000620515 ABCA10Q8WWZ4 1543 aa13□□□□□ -0.33
DDB2-214ENST00000620515 ABCA5Q8WWZ7 1642 aa12.95□□□□□ -0.34
DDB2-214ENST00000620515 IFT140Q96RY7 1462 aa12.93□□□□□ -0.34
DDB2-214ENST00000620515 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
DDB2-214ENST00000620515 EEA1Q15075 1411 aa12.91□□□□□ -0.34
DDB2-214ENST00000620515 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
DDB2-214ENST00000620515 TDRD9Q8NDG6 1382 aaKnown RBP12.87□□□□□ -0.35
DDB2-214ENST00000620515 EIF4G3O43432 1585 aaKnown RBP12.86□□□□□ -0.35
DDB2-214ENST00000620515 IGF1RP08069 1367 aa12.86□□□□□ -0.35
DDB2-214ENST00000620515 PRXQ9BXM0 1461 aa12.85□□□□□ -0.35
DDB2-214ENST00000620515 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.352e-8■■■■□ 25.5
DDB2-214ENST00000620515 GAPVD1Q14C86 1478 aa12.84□□□□□ -0.35
DDB2-214ENST00000620515 PBRM1Q86U86 1689 aa12.83□□□□□ -0.35
DDB2-214ENST00000620515 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.36
DDB2-214ENST00000620515 KIF21BO75037 1637 aa12.83□□□□□ -0.36
DDB2-214ENST00000620515 ERICH3Q5RHP9 1530 aa12.83□□□□□ -0.36
DDB2-214ENST00000620515 CSRNP3Q8WYN3 585 aa12.82□□□□□ -0.36
DDB2-214ENST00000620515 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
DDB2-214ENST00000620515 CUL7Q14999 1698 aa12.78□□□□□ -0.36
DDB2-214ENST00000620515 RAPGEF2Q9Y4G8 1499 aa12.78□□□□□ -0.36
DDB2-214ENST00000620515 ADAMTS12P58397 1594 aa12.77□□□□□ -0.36
DDB2-214ENST00000620515 LOC105371045A0A1W2PR82 267 aa12.76□□□□□ -0.37
DDB2-214ENST00000620515 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
DDB2-214ENST00000620515 SNAPC4Q5SXM2 1469 aa12.73□□□□□ -0.37
DDB2-214ENST00000620515 GOLGA3Q08378 1498 aa12.72□□□□□ -0.37
DDB2-214ENST00000620515 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.38
DDB2-214ENST00000620515 FHAD1B1AJZ9 1412 aa12.71□□□□□ -0.38
DDB2-214ENST00000620515 SYNJ2O15056 1496 aa12.66□□□□□ -0.38
DDB2-214ENST00000620515 TNIKQ9UKE5 1360 aa12.66□□□□□ -0.38
DDB2-214ENST00000620515 GRIN2AQ12879 1464 aa12.65□□□□□ -0.38
DDB2-214ENST00000620515 CHD1O14646 1710 aa12.62□□□□□ -0.39
DDB2-214ENST00000620515 CEP170Q5SW79 1584 aa12.62□□□□□ -0.39
DDB2-214ENST00000620515 CTTNBP2Q8WZ74 1663 aa12.61□□□□□ -0.39
DDB2-214ENST00000620515 EHMT2Q96KQ7 1210 aa12.61□□□□□ -0.39
DDB2-214ENST00000620515 NUP160Q12769 1436 aa12.61□□□□□ -0.39
DDB2-214ENST00000620515 CEP162Q5TB80 1403 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms