RNA–Protein interactions for RNA: ENST00000620494.1

LINC02340-202, Transcript of long intergenic non-protein coding RNA 2340, humanhuman

TSL 4 BASIC

Gene LINC02340, Length 573 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02340-202ENST00000620494 NISCHQ9Y2I1 1504 aa30.64■■■□□ 2.5
LINC02340-202ENST00000620494 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
LINC02340-202ENST00000620494 ABCC9O60706 1549 aa26.29■■□□□ 1.8
LINC02340-202ENST00000620494 ZCCHC6Q5VYS8 1495 aaKnown RBP25.64■■□□□ 1.69
LINC02340-202ENST00000620494 DCAF1Q9Y4B6 1507 aa25.44■■□□□ 1.66
LINC02340-202ENST00000620494 MYO15BQ96JP2 1530 aa25.39■■□□□ 1.66
LINC02340-202ENST00000620494 DCAF8L2P0C7V8 631 aa25.37■■□□□ 1.65
LINC02340-202ENST00000620494 NACADO15069 1562 aa25.35■■□□□ 1.65
LINC02340-202ENST00000620494 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
LINC02340-202ENST00000620494 SCRIBQ14160 1630 aa24.67■■□□□ 1.54
LINC02340-202ENST00000620494 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
LINC02340-202ENST00000620494 PABPN1Q86U42 306 aaKnown RBP eCLIP24.54■■□□□ 1.52
LINC02340-202ENST00000620494 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
LINC02340-202ENST00000620494 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
LINC02340-202ENST00000620494 DNAJC5BQ9UF47 199 aa24.31■■□□□ 1.48
LINC02340-202ENST00000620494 EIF4G1Q04637 1599 aaKnown RBP23.79■■□□□ 1.4
LINC02340-202ENST00000620494 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
LINC02340-202ENST00000620494 CC2D2AQ9P2K1 1620 aa23.76■■□□□ 1.39
LINC02340-202ENST00000620494 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
LINC02340-202ENST00000620494 SMARCA4P51532 1647 aa23.66■■□□□ 1.38
LINC02340-202ENST00000620494 MROH2BQ7Z745 1585 aa23.57■■□□□ 1.36
LINC02340-202ENST00000620494 RSF1Q96T23 1441 aaPredicted RBP23.51■■□□□ 1.35
LINC02340-202ENST00000620494 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
LINC02340-202ENST00000620494 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
LINC02340-202ENST00000620494 ATAD2BQ9ULI0 1458 aa23.42■■□□□ 1.34
LINC02340-202ENST00000620494 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
LINC02340-202ENST00000620494 WIZO95785 1651 aa23.32■■□□□ 1.32
LINC02340-202ENST00000620494 HMGXB3Q12766 1538 aa23.31■■□□□ 1.32
LINC02340-202ENST00000620494 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
LINC02340-202ENST00000620494 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
LINC02340-202ENST00000620494 TOP2AP11388 1531 aaKnown RBP23.2■■□□□ 1.3
LINC02340-202ENST00000620494 CCDC88BA6NC98 1476 aa22.87■■□□□ 1.25
LINC02340-202ENST00000620494 NESP48681 1621 aa22.71■■□□□ 1.23
LINC02340-202ENST00000620494 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.22
LINC02340-202ENST00000620494 LAMC3Q9Y6N6 1575 aa22.69■■□□□ 1.22
LINC02340-202ENST00000620494 CFTRP13569 1480 aa22.66■■□□□ 1.22
LINC02340-202ENST00000620494 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
LINC02340-202ENST00000620494 PDS5BQ9NTI5 1447 aa22.55■■□□□ 1.2
LINC02340-202ENST00000620494 PRDM2Q13029 1718 aa22.51■■□□□ 1.19
LINC02340-202ENST00000620494 CUX2O14529 1486 aa22.44■■□□□ 1.18
LINC02340-202ENST00000620494 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
LINC02340-202ENST00000620494 FANCD2Q9BXW9 1451 aa22.44■■□□□ 1.18
LINC02340-202ENST00000620494 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
LINC02340-202ENST00000620494 CEP164Q9UPV0 1460 aa22.39■■□□□ 1.17
LINC02340-202ENST00000620494 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
LINC02340-202ENST00000620494 ABCC8Q09428 1581 aa22.25■■□□□ 1.15
LINC02340-202ENST00000620494 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
LINC02340-202ENST00000620494 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
LINC02340-202ENST00000620494 WDR62O43379 1518 aa22.15■■□□□ 1.14
LINC02340-202ENST00000620494 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
LINC02340-202ENST00000620494 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
LINC02340-202ENST00000620494 CUX1P39880 1505 aa22.1■■□□□ 1.13
LINC02340-202ENST00000620494 TOP2BQ02880 1626 aa22.09■■□□□ 1.13
LINC02340-202ENST00000620494 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
LINC02340-202ENST00000620494 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
LINC02340-202ENST00000620494 TRIM41Q8WV44 630 aa22.03■■□□□ 1.12
LINC02340-202ENST00000620494 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
LINC02340-202ENST00000620494 FGD5Q6ZNL6 1462 aa21.97■■□□□ 1.11
LINC02340-202ENST00000620494 DNAJC5Q9H3Z4 198 aa21.97■■□□□ 1.11
LINC02340-202ENST00000620494 POLA1P09884 1462 aaPredicted RBP21.96■■□□□ 1.11
LINC02340-202ENST00000620494 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
LINC02340-202ENST00000620494 SOGA1O94964 1423 aa21.89■■□□□ 1.1
LINC02340-202ENST00000620494 ABCA10Q8WWZ4 1543 aa21.81■■□□□ 1.08
LINC02340-202ENST00000620494 TARBP1Q13395 1621 aaKnown RBP21.81■■□□□ 1.08
LINC02340-202ENST00000620494 RAD54L2Q9Y4B4 1467 aa21.81■■□□□ 1.08
LINC02340-202ENST00000620494 WDR97A6NE52 1622 aa21.8■■□□□ 1.08
LINC02340-202ENST00000620494 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
LINC02340-202ENST00000620494 ZNF608Q9ULD9 1512 aaPredicted RBP21.7■■□□□ 1.07
LINC02340-202ENST00000620494 EEA1Q15075 1411 aa21.7■■□□□ 1.06
LINC02340-202ENST00000620494 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
LINC02340-202ENST00000620494 ABCA5Q8WWZ7 1642 aa21.66■■□□□ 1.06
LINC02340-202ENST00000620494 GAPVD1Q14C86 1478 aa21.66■■□□□ 1.06
LINC02340-202ENST00000620494 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
LINC02340-202ENST00000620494 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.05
LINC02340-202ENST00000620494 GRIN2BQ13224 1484 aa21.61■■□□□ 1.05
LINC02340-202ENST00000620494 ERICH3Q5RHP9 1530 aa21.59■■□□□ 1.05
LINC02340-202ENST00000620494 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
LINC02340-202ENST00000620494 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.04
LINC02340-202ENST00000620494 RUSC2Q8N2Y8 1516 aa21.52■■□□□ 1.04
LINC02340-202ENST00000620494 IGF1RP08069 1367 aa21.5■■□□□ 1.03
LINC02340-202ENST00000620494 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
LINC02340-202ENST00000620494 CUL7Q14999 1698 aa21.5■■□□□ 1.03
LINC02340-202ENST00000620494 SNAPC4Q5SXM2 1469 aa21.47■■□□□ 1.03
LINC02340-202ENST00000620494 OSCARQ8IYS5 282 aa21.47■■□□□ 1.03
LINC02340-202ENST00000620494 FAM9AQ8IZU1 332 aaPredicted RBP21.47■■□□□ 1.03
LINC02340-202ENST00000620494 FHAD1B1AJZ9 1412 aa21.46■■□□□ 1.03
LINC02340-202ENST00000620494 ADAMTS12P58397 1594 aa21.44■■□□□ 1.02
LINC02340-202ENST00000620494 CARMIL1Q5VZK9 1371 aa21.42■■□□□ 1.02
LINC02340-202ENST00000620494 SYNJ2O15056 1496 aa21.41■■□□□ 1.02
LINC02340-202ENST00000620494 PRXQ9BXM0 1461 aa21.39■■□□□ 1.02
LINC02340-202ENST00000620494 CHD1O14646 1710 aa21.39■■□□□ 1.01
LINC02340-202ENST00000620494 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
LINC02340-202ENST00000620494 CHMP7Q8WUX9 453 aaPredicted RBP21.36■■□□□ 1.01
LINC02340-202ENST00000620494 KIF21BO75037 1637 aa21.36■■□□□ 1.01
LINC02340-202ENST00000620494 GRIN2AQ12879 1464 aa21.32■■□□□ 1
LINC02340-202ENST00000620494 FBLN2P98095 1184 aa21.31■■□□□ 1
LINC02340-202ENST00000620494 GOLGA3Q08378 1498 aa21.3■■□□□ 1
LINC02340-202ENST00000620494 RIMBP3CA6NJZ7 1639 aa21.22■□□□□ 0.99
LINC02340-202ENST00000620494 RIMBP3BA6NNM3 1639 aa21.22■□□□□ 0.99
LINC02340-202ENST00000620494 RIMBP3Q9UFD9 1639 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms