RNA–Protein interactions for RNA: ENST00000620285.1

NPIPB2-207, Transcript of nuclear pore complex interacting protein family, member B2, humanhuman

TSL 1 (best) BASIC

Gene NPIPB2, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB2-207ENST00000620285 AEBP2Q6ZN18 517 aaPredicted RBP25.24■■□□□ 1.63
NPIPB2-207ENST00000620285 CHIC1Q5VXU3 224 aa23.82■■□□□ 1.4
NPIPB2-207ENST00000620285 NISCHQ9Y2I1 1504 aa23.03■■□□□ 1.28
NPIPB2-207ENST00000620285 SENP3Q9H4L4 574 aaPredicted RBP21.4■■□□□ 1.02
NPIPB2-207ENST00000620285 PHF23Q9BUL5 403 aaPredicted RBP21.18■□□□□ 0.98
NPIPB2-207ENST00000620285 CCDC180Q9P1Z9 1646 aa20.68■□□□□ 0.9
NPIPB2-207ENST00000620285 ABCC9O60706 1549 aa20.34■□□□□ 0.85
NPIPB2-207ENST00000620285 FOXD1Q16676 465 aa20.05■□□□□ 0.8
NPIPB2-207ENST00000620285 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
NPIPB2-207ENST00000620285 NACADO15069 1562 aa19.56■□□□□ 0.72
NPIPB2-207ENST00000620285 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
NPIPB2-207ENST00000620285 DCAF1Q9Y4B6 1507 aa19.19■□□□□ 0.66
NPIPB2-207ENST00000620285 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
NPIPB2-207ENST00000620285 ZCCHC6Q5VYS8 1495 aaKnown RBP19.09■□□□□ 0.65
NPIPB2-207ENST00000620285 UNC13AQ9UPW8 1703 aa19.04■□□□□ 0.64
NPIPB2-207ENST00000620285 DNAJC5BQ9UF47 199 aa19.02■□□□□ 0.64
NPIPB2-207ENST00000620285 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
NPIPB2-207ENST00000620285 PLPPR3Q6T4P5 718 aa18.95■□□□□ 0.62
NPIPB2-207ENST00000620285 BICRAQ9NZM4 1560 aa18.94■□□□□ 0.62
NPIPB2-207ENST00000620285 PABPN1Q86U42 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
NPIPB2-207ENST00000620285 PPP6R1Q9UPN7 881 aa18.75■□□□□ 0.59
NPIPB2-207ENST00000620285 PIAS4Q8N2W9 510 aaPredicted RBP18.69■□□□□ 0.58
NPIPB2-207ENST00000620285 MSH5O43196 834 aa18.68■□□□□ 0.58
NPIPB2-207ENST00000620285 ADRA2BP18089 450 aa18.67■□□□□ 0.58
NPIPB2-207ENST00000620285 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
NPIPB2-207ENST00000620285 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
NPIPB2-207ENST00000620285 CC2D2AQ9P2K1 1620 aa18.47■□□□□ 0.55
NPIPB2-207ENST00000620285 POTEDQ86YR6 584 aa18.45■□□□□ 0.54
NPIPB2-207ENST00000620285 CECR2Q9BXF3 1484 aa18.41■□□□□ 0.54
NPIPB2-207ENST00000620285 NCAPD3P42695 1498 aa18.06■□□□□ 0.48
NPIPB2-207ENST00000620285 SMARCA2P51531 1590 aa17.94■□□□□ 0.46
NPIPB2-207ENST00000620285 ATAD2BQ9ULI0 1458 aa17.92■□□□□ 0.46
NPIPB2-207ENST00000620285 HMGXB3Q12766 1538 aa17.9■□□□□ 0.46
NPIPB2-207ENST00000620285 BAZ1AQ9NRL2 1556 aaPredicted RBP17.9■□□□□ 0.46
NPIPB2-207ENST00000620285 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
NPIPB2-207ENST00000620285 PEG3Q9GZU2 1588 aa17.86■□□□□ 0.45
NPIPB2-207ENST00000620285 CUX2O14529 1486 aa17.72■□□□□ 0.43
NPIPB2-207ENST00000620285 BAZ1BQ9UIG0 1483 aaKnown RBP17.72■□□□□ 0.43
NPIPB2-207ENST00000620285 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
NPIPB2-207ENST00000620285 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
NPIPB2-207ENST00000620285 LAMC3Q9Y6N6 1575 aa17.6■□□□□ 0.41
NPIPB2-207ENST00000620285 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
NPIPB2-207ENST00000620285 PDS5BQ9NTI5 1447 aa17.51■□□□□ 0.39
NPIPB2-207ENST00000620285 NESP48681 1621 aa17.48■□□□□ 0.39
NPIPB2-207ENST00000620285 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
NPIPB2-207ENST00000620285 WIZO95785 1651 aa17.39■□□□□ 0.37
NPIPB2-207ENST00000620285 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
NPIPB2-207ENST00000620285 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
NPIPB2-207ENST00000620285 KIF21AQ7Z4S6 1674 aa17.3■□□□□ 0.36
NPIPB2-207ENST00000620285 CFTRP13569 1480 aa17.3■□□□□ 0.36
NPIPB2-207ENST00000620285 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
NPIPB2-207ENST00000620285 MRC2Q9UBG0 1479 aa17.26■□□□□ 0.35
NPIPB2-207ENST00000620285 WDR62O43379 1518 aa17.24■□□□□ 0.35
NPIPB2-207ENST00000620285 CEP164Q9UPV0 1460 aa17.21■□□□□ 0.35
NPIPB2-207ENST00000620285 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
NPIPB2-207ENST00000620285 MAPK8IP2Q13387 824 aaPredicted RBP17.19■□□□□ 0.34
NPIPB2-207ENST00000620285 PRDM2Q13029 1718 aa17.1■□□□□ 0.33
NPIPB2-207ENST00000620285 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
NPIPB2-207ENST00000620285 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
NPIPB2-207ENST00000620285 URB2Q14146 1524 aaKnown RBP17.01■□□□□ 0.31
NPIPB2-207ENST00000620285 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
NPIPB2-207ENST00000620285 SCAF1Q9H7N4 1312 aaKnown RBP16.92■□□□□ 0.3
NPIPB2-207ENST00000620285 IFT140Q96RY7 1462 aa16.92■□□□□ 0.3
NPIPB2-207ENST00000620285 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
NPIPB2-207ENST00000620285 TOPBP1Q92547 1522 aa16.88■□□□□ 0.29
NPIPB2-207ENST00000620285 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
NPIPB2-207ENST00000620285 WDR97A6NE52 1622 aa16.75■□□□□ 0.27
NPIPB2-207ENST00000620285 ZNF608Q9ULD9 1512 aaPredicted RBP16.73■□□□□ 0.27
NPIPB2-207ENST00000620285 TARBP1Q13395 1621 aaKnown RBP16.73■□□□□ 0.27
NPIPB2-207ENST00000620285 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
NPIPB2-207ENST00000620285 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
NPIPB2-207ENST00000620285 SOGA1O94964 1423 aa16.66■□□□□ 0.26
NPIPB2-207ENST00000620285 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
NPIPB2-207ENST00000620285 AQRO60306 1485 aaKnown RBP eCLIP16.61■□□□□ 0.25
NPIPB2-207ENST00000620285 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
NPIPB2-207ENST00000620285 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
NPIPB2-207ENST00000620285 CUX1P39880 1505 aa16.57■□□□□ 0.24
NPIPB2-207ENST00000620285 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
NPIPB2-207ENST00000620285 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
NPIPB2-207ENST00000620285 RIMBP3CA6NJZ7 1639 aa16.53■□□□□ 0.24
NPIPB2-207ENST00000620285 RIMBP3BA6NNM3 1639 aa16.53■□□□□ 0.24
NPIPB2-207ENST00000620285 RIMBP3Q9UFD9 1639 aa16.53■□□□□ 0.24
NPIPB2-207ENST00000620285 GRIN2BQ13224 1484 aa16.53■□□□□ 0.24
NPIPB2-207ENST00000620285 TDRD9Q8NDG6 1382 aaKnown RBP16.52■□□□□ 0.24
NPIPB2-207ENST00000620285 ARHGEF11O15085 1522 aa16.52■□□□□ 0.24
NPIPB2-207ENST00000620285 CHD1O14646 1710 aa16.5■□□□□ 0.23
NPIPB2-207ENST00000620285 ABCA10Q8WWZ4 1543 aa16.5■□□□□ 0.23
NPIPB2-207ENST00000620285 SUPT5HO00267 1087 aaKnown RBP16.5■□□□□ 0.23
NPIPB2-207ENST00000620285 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
NPIPB2-207ENST00000620285 WRNQ14191 1432 aaPredicted RBP eCLIP16.46■□□□□ 0.23
NPIPB2-207ENST00000620285 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
NPIPB2-207ENST00000620285 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
NPIPB2-207ENST00000620285 SNAPC4Q5SXM2 1469 aa16.44■□□□□ 0.22
NPIPB2-207ENST00000620285 FBLN2P98095 1184 aa16.44■□□□□ 0.22
NPIPB2-207ENST00000620285 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
NPIPB2-207ENST00000620285 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
NPIPB2-207ENST00000620285 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
NPIPB2-207ENST00000620285 KCNA4P22459 653 aa16.41■□□□□ 0.22
NPIPB2-207ENST00000620285 ABCA5Q8WWZ7 1642 aa16.41■□□□□ 0.22
NPIPB2-207ENST00000620285 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms