RNA–Protein interactions for RNA: ENST00000619981.4

PDE4DIP-248, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5

Gene PDE4DIP, Length 685 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-248ENST00000619981 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
PDE4DIP-248ENST00000619981 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.94
PDE4DIP-248ENST00000619981 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
PDE4DIP-248ENST00000619981 ABCC9O60706 1549 aa19.91■□□□□ 0.78
PDE4DIP-248ENST00000619981 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
PDE4DIP-248ENST00000619981 DCAF8L2P0C7V8 631 aa19.61■□□□□ 0.73
PDE4DIP-248ENST00000619981 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
PDE4DIP-248ENST00000619981 NACADO15069 1562 aa19.44■□□□□ 0.7
PDE4DIP-248ENST00000619981 RB1CC1Q8TDY2 1594 aa19.34■□□□□ 0.69
PDE4DIP-248ENST00000619981 SHROOM4Q9ULL8 1493 aa19.27■□□□□ 0.67
PDE4DIP-248ENST00000619981 SCRIBQ14160 1630 aa19.21■□□□□ 0.67
PDE4DIP-248ENST00000619981 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.64
PDE4DIP-248ENST00000619981 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
PDE4DIP-248ENST00000619981 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDE4DIP-248ENST00000619981 CECR2Q9BXF3 1484 aa18.51■□□□□ 0.55
PDE4DIP-248ENST00000619981 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
PDE4DIP-248ENST00000619981 BAZ1AQ9NRL2 1556 aaPredicted RBP18.37■□□□□ 0.53
PDE4DIP-248ENST00000619981 SMARCA4P51532 1647 aa18.37■□□□□ 0.53
PDE4DIP-248ENST00000619981 SUPT5HO00267 1087 aaKnown RBP18.35■□□□□ 0.53
PDE4DIP-248ENST00000619981 RSF1Q96T23 1441 aaPredicted RBP18.34■□□□□ 0.53
PDE4DIP-248ENST00000619981 WIZO95785 1651 aa18.27■□□□□ 0.52
PDE4DIP-248ENST00000619981 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
PDE4DIP-248ENST00000619981 PEG3Q9GZU2 1588 aa18.11■□□□□ 0.49
PDE4DIP-248ENST00000619981 ATAD2BQ9ULI0 1458 aa18.06■□□□□ 0.48
PDE4DIP-248ENST00000619981 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
PDE4DIP-248ENST00000619981 TOP2AP11388 1531 aaKnown RBP18.04■□□□□ 0.48
PDE4DIP-248ENST00000619981 CC2D2AQ9P2K1 1620 aa18.03■□□□□ 0.48
PDE4DIP-248ENST00000619981 BAZ1BQ9UIG0 1483 aaKnown RBP17.95■□□□□ 0.46
PDE4DIP-248ENST00000619981 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
PDE4DIP-248ENST00000619981 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
PDE4DIP-248ENST00000619981 CCDC88BA6NC98 1476 aa17.82■□□□□ 0.44
PDE4DIP-248ENST00000619981 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
PDE4DIP-248ENST00000619981 PRDM2Q13029 1718 aa17.52■□□□□ 0.39
PDE4DIP-248ENST00000619981 CFTRP13569 1480 aa17.46■□□□□ 0.39
PDE4DIP-248ENST00000619981 CHIC1Q5VXU3 224 aa17.46■□□□□ 0.39
PDE4DIP-248ENST00000619981 ABCC8Q09428 1581 aa17.44■□□□□ 0.38
PDE4DIP-248ENST00000619981 NESP48681 1621 aa17.43■□□□□ 0.38
PDE4DIP-248ENST00000619981 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
PDE4DIP-248ENST00000619981 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
PDE4DIP-248ENST00000619981 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
PDE4DIP-248ENST00000619981 KIF21AQ7Z4S6 1674 aa17.29■□□□□ 0.36
PDE4DIP-248ENST00000619981 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
PDE4DIP-248ENST00000619981 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.35
PDE4DIP-248ENST00000619981 TRIM41Q8WV44 630 aa17.23■□□□□ 0.35
PDE4DIP-248ENST00000619981 CUX1P39880 1505 aa17.22■□□□□ 0.35
PDE4DIP-248ENST00000619981 BIVM-ERCC5R4GMW8 1640 aa17.22■□□□□ 0.35
PDE4DIP-248ENST00000619981 CEP164Q9UPV0 1460 aa17.2■□□□□ 0.34
PDE4DIP-248ENST00000619981 TOP2BQ02880 1626 aa17.2■□□□□ 0.34
PDE4DIP-248ENST00000619981 PDS5BQ9NTI5 1447 aa17.19■□□□□ 0.34
PDE4DIP-248ENST00000619981 DNMBPQ6XZF7 1577 aa17.12■□□□□ 0.33
PDE4DIP-248ENST00000619981 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
PDE4DIP-248ENST00000619981 TOPBP1Q92547 1522 aa17.09■□□□□ 0.33
PDE4DIP-248ENST00000619981 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
PDE4DIP-248ENST00000619981 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
PDE4DIP-248ENST00000619981 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
PDE4DIP-248ENST00000619981 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
PDE4DIP-248ENST00000619981 SOGA1O94964 1423 aa17.01■□□□□ 0.31
PDE4DIP-248ENST00000619981 WDR62O43379 1518 aa16.99■□□□□ 0.31
PDE4DIP-248ENST00000619981 RUSC2Q8N2Y8 1516 aa16.99■□□□□ 0.31
PDE4DIP-248ENST00000619981 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
PDE4DIP-248ENST00000619981 FAM9AQ8IZU1 332 aaPredicted RBP16.97■□□□□ 0.31
PDE4DIP-248ENST00000619981 WDR97A6NE52 1622 aa16.94■□□□□ 0.3
PDE4DIP-248ENST00000619981 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
PDE4DIP-248ENST00000619981 CUX2O14529 1486 aa16.88■□□□□ 0.29
PDE4DIP-248ENST00000619981 TARBP1Q13395 1621 aaKnown RBP16.88■□□□□ 0.29
PDE4DIP-248ENST00000619981 EEA1Q15075 1411 aa16.87■□□□□ 0.29
PDE4DIP-248ENST00000619981 ABCA10Q8WWZ4 1543 aa16.86■□□□□ 0.29
PDE4DIP-248ENST00000619981 KIF27Q86VH2 1401 aa16.82■□□□□ 0.28
PDE4DIP-248ENST00000619981 ABCA5Q8WWZ7 1642 aa16.81■□□□□ 0.28
PDE4DIP-248ENST00000619981 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
PDE4DIP-248ENST00000619981 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
PDE4DIP-248ENST00000619981 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
PDE4DIP-248ENST00000619981 CSRNP3Q8WYN3 585 aa16.77■□□□□ 0.28
PDE4DIP-248ENST00000619981 KIF21BO75037 1637 aa16.76■□□□□ 0.27
PDE4DIP-248ENST00000619981 PBRM1Q86U86 1689 aa16.75■□□□□ 0.27
PDE4DIP-248ENST00000619981 TDRD9Q8NDG6 1382 aaKnown RBP16.75■□□□□ 0.27
PDE4DIP-248ENST00000619981 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
PDE4DIP-248ENST00000619981 EIF4G3O43432 1585 aaKnown RBP16.72■□□□□ 0.27
PDE4DIP-248ENST00000619981 GAPVD1Q14C86 1478 aa16.71■□□□□ 0.27
PDE4DIP-248ENST00000619981 AQRO60306 1485 aaKnown RBP eCLIP16.69■□□□□ 0.26
PDE4DIP-248ENST00000619981 GOLGA3Q08378 1498 aa16.68■□□□□ 0.26
PDE4DIP-248ENST00000619981 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
PDE4DIP-248ENST00000619981 IGF1RP08069 1367 aa16.68■□□□□ 0.26
PDE4DIP-248ENST00000619981 RAPGEF2Q9Y4G8 1499 aa16.67■□□□□ 0.26
PDE4DIP-248ENST00000619981 CUL7Q14999 1698 aa16.67■□□□□ 0.26
PDE4DIP-248ENST00000619981 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
PDE4DIP-248ENST00000619981 ADAMTS12P58397 1594 aa16.62■□□□□ 0.25
PDE4DIP-248ENST00000619981 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
PDE4DIP-248ENST00000619981 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
PDE4DIP-248ENST00000619981 SNAPC4Q5SXM2 1469 aa16.58■□□□□ 0.24
PDE4DIP-248ENST00000619981 TNIKQ9UKE5 1360 aa16.54■□□□□ 0.24
PDE4DIP-248ENST00000619981 UBTFP17480 764 aaKnown RBP16.54■□□□□ 0.24
PDE4DIP-248ENST00000619981 FHAD1B1AJZ9 1412 aa16.52■□□□□ 0.23
PDE4DIP-248ENST00000619981 CTTNBP2Q8WZ74 1663 aa16.51■□□□□ 0.23
PDE4DIP-248ENST00000619981 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
PDE4DIP-248ENST00000619981 CEP162Q5TB80 1403 aa16.49■□□□□ 0.23
PDE4DIP-248ENST00000619981 CHD1O14646 1710 aa16.45■□□□□ 0.22
PDE4DIP-248ENST00000619981 SYNJ2O15056 1496 aa16.43■□□□□ 0.22
PDE4DIP-248ENST00000619981 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
PDE4DIP-248ENST00000619981 CLIP1P30622 1438 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms