RNA–Protein interactions for RNA: ENST00000619924.1

LINC01140-211, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

Gene LINC01140, Length 1,034 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-211ENST00000619924 NISCHQ9Y2I1 1504 aa53.68■■■■■ 6.18
LINC01140-211ENST00000619924 CCDC180Q9P1Z9 1646 aa47.61■■■■■ 5.21
LINC01140-211ENST00000619924 ABCC9O60706 1549 aa45.79■■■■■ 4.92
LINC01140-211ENST00000619924 ZCCHC6Q5VYS8 1495 aaKnown RBP44.91■■■■■ 4.78
LINC01140-211ENST00000619924 DCAF1Q9Y4B6 1507 aa44.52■■■■■ 4.72
LINC01140-211ENST00000619924 NACADO15069 1562 aa44.52■■■■■ 4.72
LINC01140-211ENST00000619924 MYO15BQ96JP2 1530 aa44.5■■■■■ 4.71
LINC01140-211ENST00000619924 RB1CC1Q8TDY2 1594 aa44.41■■■■■ 4.7
LINC01140-211ENST00000619924 DCAF8L2P0C7V8 631 aa44.23■■■■■ 4.67
LINC01140-211ENST00000619924 UNC13AQ9UPW8 1703 aa43.56■■■■■ 4.56
LINC01140-211ENST00000619924 SCRIBQ14160 1630 aa43.37■■■■■ 4.53
LINC01140-211ENST00000619924 BICRAQ9NZM4 1560 aa43.11■■■■■ 4.49
LINC01140-211ENST00000619924 PABPN1Q86U42 306 aaKnown RBP eCLIP42.76■■■■■ 4.44
LINC01140-211ENST00000619924 SHROOM4Q9ULL8 1493 aa42.74■■■■■ 4.43
LINC01140-211ENST00000619924 EIF4G1Q04637 1599 aaKnown RBP41.88■■■■■ 4.3
LINC01140-211ENST00000619924 CECR2Q9BXF3 1484 aa41.7■■■■■ 4.27
LINC01140-211ENST00000619924 SMARCA4P51532 1647 aa41.58■■■■■ 4.25
LINC01140-211ENST00000619924 BAZ1AQ9NRL2 1556 aaPredicted RBP41.58■■■■■ 4.25
LINC01140-211ENST00000619924 CC2D2AQ9P2K1 1620 aa41.55■■■■■ 4.24
LINC01140-211ENST00000619924 DNAJC5BQ9UF47 199 aa41.4■■■■■ 4.22
LINC01140-211ENST00000619924 MROH2BQ7Z745 1585 aa41.37■■■■■ 4.21
LINC01140-211ENST00000619924 PEG3Q9GZU2 1588 aa41.21■■■■■ 4.19
LINC01140-211ENST00000619924 SMARCA2P51531 1590 aa41.15■■■■■ 4.18
LINC01140-211ENST00000619924 ATAD2BQ9ULI0 1458 aa41.13■■■■■ 4.17
LINC01140-211ENST00000619924 RSF1Q96T23 1441 aaPredicted RBP41.06■■■■■ 4.16
LINC01140-211ENST00000619924 NCAPD3P42695 1498 aa41.02■■■■■ 4.16
LINC01140-211ENST00000619924 WIZO95785 1651 aa40.98■■■■■ 4.15
LINC01140-211ENST00000619924 HMGXB3Q12766 1538 aa40.98■■■■■ 4.15
LINC01140-211ENST00000619924 BAZ1BQ9UIG0 1483 aaKnown RBP40.82■■■■■ 4.12
LINC01140-211ENST00000619924 TOP2AP11388 1531 aaKnown RBP40.61■■■■■ 4.09
LINC01140-211ENST00000619924 SUPT5HO00267 1087 aaKnown RBP40.23■■■■■ 4.03
LINC01140-211ENST00000619924 CCDC88BA6NC98 1476 aa40.02■■■■■ 4
LINC01140-211ENST00000619924 LAMC3Q9Y6N6 1575 aa39.9■■■■□ 3.98
LINC01140-211ENST00000619924 NESP48681 1621 aa39.83■■■■□ 3.97
LINC01140-211ENST00000619924 CADPSQ9ULU8 1353 aa39.8■■■■□ 3.96
LINC01140-211ENST00000619924 CFTRP13569 1480 aa39.75■■■■□ 3.95
LINC01140-211ENST00000619924 PRDM2Q13029 1718 aa39.71■■■■□ 3.95
LINC01140-211ENST00000619924 KIF21AQ7Z4S6 1674 aa39.51■■■■□ 3.91
LINC01140-211ENST00000619924 PDS5BQ9NTI5 1447 aa39.49■■■■□ 3.91
LINC01140-211ENST00000619924 ERCC6Q03468 1493 aa39.41■■■■□ 3.9
LINC01140-211ENST00000619924 FANCD2Q9BXW9 1451 aa39.38■■■■□ 3.9
LINC01140-211ENST00000619924 CEP164Q9UPV0 1460 aa39.3■■■■□ 3.88
LINC01140-211ENST00000619924 THOC2Q8NI27 1593 aaKnown RBP39.26■■■■□ 3.88
LINC01140-211ENST00000619924 MRC2Q9UBG0 1479 aa39.12■■■■□ 3.85
LINC01140-211ENST00000619924 WDR62O43379 1518 aa39.05■■■■□ 3.84
LINC01140-211ENST00000619924 URB2Q14146 1524 aaKnown RBP38.99■■■■□ 3.83
LINC01140-211ENST00000619924 DNMBPQ6XZF7 1577 aa38.91■■■■□ 3.82
LINC01140-211ENST00000619924 CUX2O14529 1486 aa38.88■■■■□ 3.81
LINC01140-211ENST00000619924 TOPBP1Q92547 1522 aa38.85■■■■□ 3.81
LINC01140-211ENST00000619924 ABCC8Q09428 1581 aa38.84■■■■□ 3.81
LINC01140-211ENST00000619924 CUX1P39880 1505 aa38.79■■■■□ 3.8
LINC01140-211ENST00000619924 BIVM-ERCC5R4GMW8 1640 aa38.69■■■■□ 3.78
LINC01140-211ENST00000619924 WRNQ14191 1432 aaPredicted RBP eCLIP38.69■■■■□ 3.78
LINC01140-211ENST00000619924 SYNJ1O43426 1573 aa38.67■■■■□ 3.78
LINC01140-211ENST00000619924 TOP2BQ02880 1626 aa38.65■■■■□ 3.78
LINC01140-211ENST00000619924 POLA1P09884 1462 aaPredicted RBP38.56■■■■□ 3.76
LINC01140-211ENST00000619924 FGD5Q6ZNL6 1462 aa38.54■■■■□ 3.76
LINC01140-211ENST00000619924 TARBP1Q13395 1621 aaKnown RBP38.45■■■■□ 3.75
LINC01140-211ENST00000619924 IFT140Q96RY7 1462 aa38.44■■■■□ 3.74
LINC01140-211ENST00000619924 WDR97A6NE52 1622 aa38.38■■■■□ 3.73
LINC01140-211ENST00000619924 RAD54L2Q9Y4B4 1467 aa38.32■■■■□ 3.72
LINC01140-211ENST00000619924 SOGA1O94964 1423 aa38.29■■■■□ 3.72
LINC01140-211ENST00000619924 ABCA10Q8WWZ4 1543 aa38.22■■■■□ 3.71
LINC01140-211ENST00000619924 ZNF608Q9ULD9 1512 aaPredicted RBP38.21■■■■□ 3.71
LINC01140-211ENST00000619924 EIF4G3O43432 1585 aaKnown RBP38.19■■■■□ 3.7
LINC01140-211ENST00000619924 ABCA5Q8WWZ7 1642 aa38.11■■■■□ 3.69
LINC01140-211ENST00000619924 AQRO60306 1485 aaKnown RBP eCLIP38■■■■□ 3.67
LINC01140-211ENST00000619924 TRIM41Q8WV44 630 aa37.99■■■■□ 3.67
LINC01140-211ENST00000619924 PBRM1Q86U86 1689 aa37.98■■■■□ 3.67
LINC01140-211ENST00000619924 TDRD9Q8NDG6 1382 aaKnown RBP37.98■■■■□ 3.67
LINC01140-211ENST00000619924 CHIC1Q5VXU3 224 aa37.96■■■■□ 3.67
LINC01140-211ENST00000619924 GAPVD1Q14C86 1478 aa37.93■■■■□ 3.66
LINC01140-211ENST00000619924 GRIN2BQ13224 1484 aa37.85■■■■□ 3.65
LINC01140-211ENST00000619924 KIF27Q86VH2 1401 aa37.81■■■■□ 3.64
LINC01140-211ENST00000619924 ERICH3Q5RHP9 1530 aa37.79■■■■□ 3.64
LINC01140-211ENST00000619924 SNAPC4Q5SXM2 1469 aa37.75■■■■□ 3.63
LINC01140-211ENST00000619924 MAGI1Q96QZ7 1491 aaPredicted RBP37.74■■■■□ 3.63
LINC01140-211ENST00000619924 ADAMTS12P58397 1594 aa37.69■■■■□ 3.62
LINC01140-211ENST00000619924 RUSC2Q8N2Y8 1516 aa37.66■■■■□ 3.62
LINC01140-211ENST00000619924 CHD1O14646 1710 aa37.61■■■■□ 3.61
LINC01140-211ENST00000619924 CUL7Q14999 1698 aa37.61■■■■□ 3.61
LINC01140-211ENST00000619924 SYNJ2O15056 1496 aa37.56■■■■□ 3.6
LINC01140-211ENST00000619924 IGF1RP08069 1367 aa37.55■■■■□ 3.6
LINC01140-211ENST00000619924 EEA1Q15075 1411 aa37.52■■■■□ 3.6
LINC01140-211ENST00000619924 FHAD1B1AJZ9 1412 aa37.51■■■■□ 3.59
LINC01140-211ENST00000619924 GRIN2AQ12879 1464 aa37.4■■■■□ 3.58
LINC01140-211ENST00000619924 CARMIL1Q5VZK9 1371 aa37.33■■■■□ 3.57
LINC01140-211ENST00000619924 CHMP7Q8WUX9 453 aaPredicted RBP37.3■■■■□ 3.56
LINC01140-211ENST00000619924 PRXQ9BXM0 1461 aa37.3■■■■□ 3.56
LINC01140-211ENST00000619924 FBLN2P98095 1184 aa37.26■■■■□ 3.56
LINC01140-211ENST00000619924 RAPGEF2Q9Y4G8 1499 aa37.25■■■■□ 3.55
LINC01140-211ENST00000619924 CEP170Q5SW79 1584 aa37.25■■■■□ 3.55
LINC01140-211ENST00000619924 NUP160Q12769 1436 aa37.24■■■■□ 3.55
LINC01140-211ENST00000619924 CSRNP3Q8WYN3 585 aa37.22■■■■□ 3.55
LINC01140-211ENST00000619924 CLASP1Q7Z460 1538 aa37.2■■■■□ 3.55
LINC01140-211ENST00000619924 KIF21BO75037 1637 aa37.19■■■■□ 3.54
LINC01140-211ENST00000619924 OSCARQ8IYS5 282 aa37.16■■■■□ 3.54
LINC01140-211ENST00000619924 FAM9AQ8IZU1 332 aaPredicted RBP37.14■■■■□ 3.54
LINC01140-211ENST00000619924 CTTNBP2Q8WZ74 1663 aa37.03■■■■□ 3.52
LINC01140-211ENST00000619924 SHROOM2Q13796 1616 aa36.97■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms