RNA–Protein interactions for RNA: ENST00000619923.1

SLC46A1-209, Transcript of solute carrier family 46 member 1, humanhuman

Gene SLC46A1, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-209ENST00000619923 NISCHQ9Y2I1 1504 aa20.47■□□□□ 0.87
SLC46A1-209ENST00000619923 CCDC180Q9P1Z9 1646 aa18.54■□□□□ 0.56
SLC46A1-209ENST00000619923 ABCC9O60706 1549 aa18.54■□□□□ 0.56
SLC46A1-209ENST00000619923 RB1CC1Q8TDY2 1594 aa17.6■□□□□ 0.41
SLC46A1-209ENST00000619923 DNAJC5BQ9UF47 199 aa17.51■□□□□ 0.39
SLC46A1-209ENST00000619923 UNC13AQ9UPW8 1703 aa17.48■□□□□ 0.39
SLC46A1-209ENST00000619923 NACADO15069 1562 aa17.43■□□□□ 0.38
SLC46A1-209ENST00000619923 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
SLC46A1-209ENST00000619923 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
SLC46A1-209ENST00000619923 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
SLC46A1-209ENST00000619923 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
SLC46A1-209ENST00000619923 ZCCHC6Q5VYS8 1495 aaKnown RBP16.98■□□□□ 0.31
SLC46A1-209ENST00000619923 DCAF1Q9Y4B6 1507 aa16.91■□□□□ 0.3
SLC46A1-209ENST00000619923 SHROOM4Q9ULL8 1493 aa16.85■□□□□ 0.29
SLC46A1-209ENST00000619923 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
SLC46A1-209ENST00000619923 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
SLC46A1-209ENST00000619923 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
SLC46A1-209ENST00000619923 CECR2Q9BXF3 1484 aa16.69■□□□□ 0.26
SLC46A1-209ENST00000619923 DNAJC5Q9H3Z4 198 aa16.07■□□□□ 0.16
SLC46A1-209ENST00000619923 SMARCA4P51532 1647 aa16.07■□□□□ 0.16
SLC46A1-209ENST00000619923 NCAPD3P42695 1498 aa16.06■□□□□ 0.16
SLC46A1-209ENST00000619923 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
SLC46A1-209ENST00000619923 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
SLC46A1-209ENST00000619923 CUX2O14529 1486 aa16.02■□□□□ 0.15
SLC46A1-209ENST00000619923 SMARCA2P51531 1590 aa15.96■□□□□ 0.14
SLC46A1-209ENST00000619923 NESP48681 1621 aa15.95■□□□□ 0.14
SLC46A1-209ENST00000619923 THOC2Q8NI27 1593 aaKnown RBP15.92■□□□□ 0.14
SLC46A1-209ENST00000619923 ERCC6Q03468 1493 aa15.92■□□□□ 0.14
SLC46A1-209ENST00000619923 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
SLC46A1-209ENST00000619923 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
SLC46A1-209ENST00000619923 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
SLC46A1-209ENST00000619923 BAZ1BQ9UIG0 1483 aaKnown RBP15.84■□□□□ 0.13
SLC46A1-209ENST00000619923 MROH2BQ7Z745 1585 aa15.8■□□□□ 0.12
SLC46A1-209ENST00000619923 LAMC3Q9Y6N6 1575 aa15.78■□□□□ 0.12
SLC46A1-209ENST00000619923 WIZO95785 1651 aa15.66■□□□□ 0.1
SLC46A1-209ENST00000619923 WDR62O43379 1518 aa15.58■□□□□ 0.09
SLC46A1-209ENST00000619923 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
SLC46A1-209ENST00000619923 MRC2Q9UBG0 1479 aa15.53■□□□□ 0.08
SLC46A1-209ENST00000619923 CADPSQ9ULU8 1353 aa15.51■□□□□ 0.07
SLC46A1-209ENST00000619923 PRDM2Q13029 1718 aa15.46■□□□□ 0.06
SLC46A1-209ENST00000619923 CEP164Q9UPV0 1460 aa15.42■□□□□ 0.06
SLC46A1-209ENST00000619923 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
SLC46A1-209ENST00000619923 TOP2AP11388 1531 aaKnown RBP15.39■□□□□ 0.05
SLC46A1-209ENST00000619923 CFTRP13569 1480 aa15.38■□□□□ 0.05
SLC46A1-209ENST00000619923 URB2Q14146 1524 aaKnown RBP15.37■□□□□ 0.05
SLC46A1-209ENST00000619923 RSF1Q96T23 1441 aaPredicted RBP15.35■□□□□ 0.05
SLC46A1-209ENST00000619923 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
SLC46A1-209ENST00000619923 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
SLC46A1-209ENST00000619923 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
SLC46A1-209ENST00000619923 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
SLC46A1-209ENST00000619923 ZNF608Q9ULD9 1512 aaPredicted RBP15.18■□□□□ 0.02
SLC46A1-209ENST00000619923 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
SLC46A1-209ENST00000619923 CCDC88BA6NC98 1476 aa15.16■□□□□ 0.02
SLC46A1-209ENST00000619923 CHD1O14646 1710 aa15.14■□□□□ 0.01
SLC46A1-209ENST00000619923 TOPBP1Q92547 1522 aa15.13■□□□□ 0.01
SLC46A1-209ENST00000619923 TARBP1Q13395 1621 aaKnown RBP15.1■□□□□ 0.01
SLC46A1-209ENST00000619923 IFT140Q96RY7 1462 aa15.1■□□□□ 0.01
SLC46A1-209ENST00000619923 DNMBPQ6XZF7 1577 aa15.09■□□□□ 0.01
SLC46A1-209ENST00000619923 ARHGEF11O15085 1522 aa15.07■□□□□ 0
SLC46A1-209ENST00000619923 OSCARQ8IYS5 282 aa15.07■□□□□ 0
SLC46A1-209ENST00000619923 POLA1P09884 1462 aaPredicted RBP14.97□□□□□ -0.01
SLC46A1-209ENST00000619923 ABCC8Q09428 1581 aa14.96□□□□□ -0.01
SLC46A1-209ENST00000619923 WDR97A6NE52 1622 aa14.95□□□□□ -0.02
SLC46A1-209ENST00000619923 AQRO60306 1485 aaKnown RBP eCLIP14.95□□□□□ -0.02
SLC46A1-209ENST00000619923 ARAP1Q96P48 1450 aa14.94□□□□□ -0.02
SLC46A1-209ENST00000619923 RAD54L2Q9Y4B4 1467 aa14.9□□□□□ -0.02
SLC46A1-209ENST00000619923 CLASP1Q7Z460 1538 aa14.89□□□□□ -0.03
SLC46A1-209ENST00000619923 CUX1P39880 1505 aa14.87□□□□□ -0.03
SLC46A1-209ENST00000619923 PBRM1Q86U86 1689 aa14.86□□□□□ -0.03
SLC46A1-209ENST00000619923 FGD5Q6ZNL6 1462 aa14.85□□□□□ -0.03
SLC46A1-209ENST00000619923 SNAPC4Q5SXM2 1469 aa14.84□□□□□ -0.03
SLC46A1-209ENST00000619923 TDRD9Q8NDG6 1382 aaKnown RBP14.79□□□□□ -0.04
SLC46A1-209ENST00000619923 ABCA5Q8WWZ7 1642 aa14.77□□□□□ -0.04
SLC46A1-209ENST00000619923 SOGA1O94964 1423 aa14.77□□□□□ -0.04
SLC46A1-209ENST00000619923 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
SLC46A1-209ENST00000619923 CYB5RLQ6IPT4 315 aa14.76□□□□□ -0.05
SLC46A1-209ENST00000619923 MAGI1Q96QZ7 1491 aaPredicted RBP14.76□□□□□ -0.05
SLC46A1-209ENST00000619923 GRIN2BQ13224 1484 aa14.71□□□□□ -0.05
SLC46A1-209ENST00000619923 SYNJ2O15056 1496 aa14.7□□□□□ -0.06
SLC46A1-209ENST00000619923 FBLN2P98095 1184 aa14.69□□□□□ -0.06
SLC46A1-209ENST00000619923 ERCC6L2Q5T890 1561 aa14.68□□□□□ -0.06
SLC46A1-209ENST00000619923 ABCA10Q8WWZ4 1543 aa14.66□□□□□ -0.06
SLC46A1-209ENST00000619923 ADAMTS12P58397 1594 aa14.66□□□□□ -0.06
SLC46A1-209ENST00000619923 BIVM-ERCC5R4GMW8 1640 aa14.65□□□□□ -0.06
SLC46A1-209ENST00000619923 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
SLC46A1-209ENST00000619923 CEP170Q5SW79 1584 aa14.62□□□□□ -0.07
SLC46A1-209ENST00000619923 SHROOM2Q13796 1616 aa14.61□□□□□ -0.07
SLC46A1-209ENST00000619923 TOP2BQ02880 1626 aa14.59□□□□□ -0.07
SLC46A1-209ENST00000619923 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
SLC46A1-209ENST00000619923 GRIN2AQ12879 1464 aa14.57□□□□□ -0.08
SLC46A1-209ENST00000619923 KIF13AQ9H1H9 1805 aa14.57□□□□□ -0.08
SLC46A1-209ENST00000619923 CHMP7Q8WUX9 453 aaPredicted RBP14.56□□□□□ -0.08
SLC46A1-209ENST00000619923 NUP160Q12769 1436 aa14.54□□□□□ -0.08
SLC46A1-209ENST00000619923 ERICH3Q5RHP9 1530 aa14.47□□□□□ -0.09
SLC46A1-209ENST00000619923 RUSC2Q8N2Y8 1516 aa14.47□□□□□ -0.09
SLC46A1-209ENST00000619923 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
SLC46A1-209ENST00000619923 FHAD1B1AJZ9 1412 aa14.43□□□□□ -0.1
SLC46A1-209ENST00000619923 ADCY10Q96PN6 1610 aa14.37□□□□□ -0.11
SLC46A1-209ENST00000619923 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
SLC46A1-209ENST00000619923 DIP2BQ9P265 1576 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms