RNA–Protein interactions for RNA: ENST00000619368.4

RDM1-225, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-225ENST00000619368 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.25
RDM1-225ENST00000619368 ABCC9O60706 1549 aa20.55■□□□□ 0.88
RDM1-225ENST00000619368 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
RDM1-225ENST00000619368 RB1CC1Q8TDY2 1594 aa19.53■□□□□ 0.72
RDM1-225ENST00000619368 NACADO15069 1562 aa19.38■□□□□ 0.69
RDM1-225ENST00000619368 DNAJC5BQ9UF47 199 aa19.35■□□□□ 0.69
RDM1-225ENST00000619368 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
RDM1-225ENST00000619368 UNC13AQ9UPW8 1703 aa19.2■□□□□ 0.66
RDM1-225ENST00000619368 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
RDM1-225ENST00000619368 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
RDM1-225ENST00000619368 BICRAQ9NZM4 1560 aa19■□□□□ 0.63
RDM1-225ENST00000619368 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
RDM1-225ENST00000619368 DCAF1Q9Y4B6 1507 aa18.84■□□□□ 0.61
RDM1-225ENST00000619368 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
RDM1-225ENST00000619368 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
RDM1-225ENST00000619368 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
RDM1-225ENST00000619368 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
RDM1-225ENST00000619368 CECR2Q9BXF3 1484 aa18.5■□□□□ 0.55
RDM1-225ENST00000619368 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
RDM1-225ENST00000619368 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
RDM1-225ENST00000619368 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
RDM1-225ENST00000619368 SMARCA2P51531 1590 aa17.77■□□□□ 0.44
RDM1-225ENST00000619368 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
RDM1-225ENST00000619368 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
RDM1-225ENST00000619368 BAZ1AQ9NRL2 1556 aaPredicted RBP17.71■□□□□ 0.43
RDM1-225ENST00000619368 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
RDM1-225ENST00000619368 CUX2O14529 1486 aa17.69■□□□□ 0.42
RDM1-225ENST00000619368 NESP48681 1621 aa17.66■□□□□ 0.42
RDM1-225ENST00000619368 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
RDM1-225ENST00000619368 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
RDM1-225ENST00000619368 MROH2BQ7Z745 1585 aa17.61■□□□□ 0.41
RDM1-225ENST00000619368 LAMC3Q9Y6N6 1575 aa17.49■□□□□ 0.39
RDM1-225ENST00000619368 THOC2Q8NI27 1593 aaKnown RBP17.48■□□□□ 0.39
RDM1-225ENST00000619368 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
RDM1-225ENST00000619368 WIZO95785 1651 aa17.42■□□□□ 0.38
RDM1-225ENST00000619368 PDS5BQ9NTI5 1447 aa17.38■□□□□ 0.37
RDM1-225ENST00000619368 CADPSQ9ULU8 1353 aa17.34■□□□□ 0.37
RDM1-225ENST00000619368 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
RDM1-225ENST00000619368 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
RDM1-225ENST00000619368 WDR62O43379 1518 aa17.21■□□□□ 0.35
RDM1-225ENST00000619368 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
RDM1-225ENST00000619368 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
RDM1-225ENST00000619368 FANCD2Q9BXW9 1451 aa17.15■□□□□ 0.34
RDM1-225ENST00000619368 CFTRP13569 1480 aa17.14■□□□□ 0.33
RDM1-225ENST00000619368 PRDM2Q13029 1718 aa17.04■□□□□ 0.32
RDM1-225ENST00000619368 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
RDM1-225ENST00000619368 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
RDM1-225ENST00000619368 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
RDM1-225ENST00000619368 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
RDM1-225ENST00000619368 TOPBP1Q92547 1522 aa16.84■□□□□ 0.29
RDM1-225ENST00000619368 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
RDM1-225ENST00000619368 IFT140Q96RY7 1462 aa16.81■□□□□ 0.28
RDM1-225ENST00000619368 ABCC8Q09428 1581 aa16.77■□□□□ 0.27
RDM1-225ENST00000619368 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
RDM1-225ENST00000619368 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
RDM1-225ENST00000619368 RIMBP3CA6NJZ7 1639 aa16.71■□□□□ 0.27
RDM1-225ENST00000619368 RIMBP3BA6NNM3 1639 aa16.71■□□□□ 0.27
RDM1-225ENST00000619368 RIMBP3Q9UFD9 1639 aa16.71■□□□□ 0.27
RDM1-225ENST00000619368 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
RDM1-225ENST00000619368 CHD1O14646 1710 aa16.67■□□□□ 0.26
RDM1-225ENST00000619368 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.261e-6■■■■□ 21.5
RDM1-225ENST00000619368 POLA1P09884 1462 aaPredicted RBP16.66■□□□□ 0.26
RDM1-225ENST00000619368 ARHGEF11O15085 1522 aa16.63■□□□□ 0.25
RDM1-225ENST00000619368 RAD54L2Q9Y4B4 1467 aa16.61■□□□□ 0.25
RDM1-225ENST00000619368 SOGA1O94964 1423 aa16.57■□□□□ 0.24
RDM1-225ENST00000619368 TDRD9Q8NDG6 1382 aaKnown RBP16.56■□□□□ 0.24
RDM1-225ENST00000619368 FGD5Q6ZNL6 1462 aa16.55■□□□□ 0.24
RDM1-225ENST00000619368 FBLN2P98095 1184 aa16.55■□□□□ 0.24
RDM1-225ENST00000619368 CUX1P39880 1505 aa16.55■□□□□ 0.24
RDM1-225ENST00000619368 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.24
RDM1-225ENST00000619368 WDR97A6NE52 1622 aa16.49■□□□□ 0.23
RDM1-225ENST00000619368 SNAPC4Q5SXM2 1469 aa16.48■□□□□ 0.23
RDM1-225ENST00000619368 ARAP1Q96P48 1450 aa16.47■□□□□ 0.23
RDM1-225ENST00000619368 SUPT5HO00267 1087 aaKnown RBP16.43■□□□□ 0.22
RDM1-225ENST00000619368 GRIN2BQ13224 1484 aa16.42■□□□□ 0.22
RDM1-225ENST00000619368 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
RDM1-225ENST00000619368 CLASP1Q7Z460 1538 aa16.42■□□□□ 0.22
RDM1-225ENST00000619368 PBRM1Q86U86 1689 aa16.42■□□□□ 0.22
RDM1-225ENST00000619368 CHMP7Q8WUX9 453 aaPredicted RBP16.41■□□□□ 0.22
RDM1-225ENST00000619368 SYNJ1O43426 1573 aa16.39■□□□□ 0.21
RDM1-225ENST00000619368 SYNJ2O15056 1496 aa16.37■□□□□ 0.21
RDM1-225ENST00000619368 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
RDM1-225ENST00000619368 ABCA5Q8WWZ7 1642 aa16.35■□□□□ 0.21
RDM1-225ENST00000619368 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
RDM1-225ENST00000619368 TRHP20396 242 aaPredicted RBP16.33■□□□□ 0.2
RDM1-225ENST00000619368 BIVM-ERCC5R4GMW8 1640 aa16.28■□□□□ 0.2
RDM1-225ENST00000619368 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
RDM1-225ENST00000619368 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
RDM1-225ENST00000619368 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
RDM1-225ENST00000619368 ADAMTS12P58397 1594 aa16.22■□□□□ 0.19
RDM1-225ENST00000619368 ERCC6L2Q5T890 1561 aa16.2■□□□□ 0.18
RDM1-225ENST00000619368 CEP170Q5SW79 1584 aa16.19■□□□□ 0.18
RDM1-225ENST00000619368 NUP160Q12769 1436 aa16.16■□□□□ 0.18
RDM1-225ENST00000619368 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
RDM1-225ENST00000619368 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
RDM1-225ENST00000619368 SHROOM2Q13796 1616 aa16.13■□□□□ 0.17
RDM1-225ENST00000619368 PRG4Q92954 1404 aaPredicted RBP16.02■□□□□ 0.15
RDM1-225ENST00000619368 JPH4Q96JJ6 628 aa16.01■□□□□ 0.15
RDM1-225ENST00000619368 RUSC2Q8N2Y8 1516 aa15.99■□□□□ 0.15
RDM1-225ENST00000619368 KIF13AQ9H1H9 1805 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 203.7 ms