RNA–Protein interactions for RNA: ENST00000619297.1

LHX1-203, Transcript of LIM homeobox 1, humanhuman

TSL 4

Gene LHX1, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1-203ENST00000619297 NISCHQ9Y2I1 1504 aa52.18■■■■■ 5.94
LHX1-203ENST00000619297 CCDC180Q9P1Z9 1646 aa46.54■■■■■ 5.04
LHX1-203ENST00000619297 ABCC9O60706 1549 aa45.46■■■■■ 4.87
LHX1-203ENST00000619297 RB1CC1Q8TDY2 1594 aa43.8■■■■■ 4.6
LHX1-203ENST00000619297 NACADO15069 1562 aa43.72■■■■■ 4.59
LHX1-203ENST00000619297 DCAF8L2P0C7V8 631 aa43.55■■■■■ 4.56
LHX1-203ENST00000619297 ZCCHC6Q5VYS8 1495 aaKnown RBP43.45■■■■■ 4.55
LHX1-203ENST00000619297 MYO15BQ96JP2 1530 aa43.44■■■■■ 4.54
LHX1-203ENST00000619297 DCAF1Q9Y4B6 1507 aa43.22■■■■■ 4.51
LHX1-203ENST00000619297 UNC13AQ9UPW8 1703 aa42.81■■■■■ 4.44
LHX1-203ENST00000619297 BICRAQ9NZM4 1560 aa42.39■■■■■ 4.38
LHX1-203ENST00000619297 PABPN1Q86U42 306 aaKnown RBP eCLIP42.39■■■■■ 4.38
LHX1-203ENST00000619297 SCRIBQ14160 1630 aa42.37■■■■■ 4.37
LHX1-203ENST00000619297 SHROOM4Q9ULL8 1493 aa42.06■■■■■ 4.32
LHX1-203ENST00000619297 DNAJC5BQ9UF47 199 aa41.65■■■■■ 4.26
LHX1-203ENST00000619297 EIF4G1Q04637 1599 aaKnown RBP41.32■■■■■ 4.2
LHX1-203ENST00000619297 CC2D2AQ9P2K1 1620 aa41.17■■■■■ 4.18
LHX1-203ENST00000619297 CECR2Q9BXF3 1484 aa40.88■■■■■ 4.13
LHX1-203ENST00000619297 SMARCA4P51532 1647 aa40.54■■■■■ 4.08
LHX1-203ENST00000619297 BAZ1AQ9NRL2 1556 aaPredicted RBP40.5■■■■■ 4.07
LHX1-203ENST00000619297 SMARCA2P51531 1590 aa40.31■■■■■ 4.04
LHX1-203ENST00000619297 NCAPD3P42695 1498 aa40.28■■■■■ 4.04
LHX1-203ENST00000619297 ATAD2BQ9ULI0 1458 aa40.27■■■■■ 4.04
LHX1-203ENST00000619297 MROH2BQ7Z745 1585 aa40.18■■■■■ 4.02
LHX1-203ENST00000619297 PEG3Q9GZU2 1588 aa40.15■■■■■ 4.02
LHX1-203ENST00000619297 HMGXB3Q12766 1538 aa40.14■■■■■ 4.02
LHX1-203ENST00000619297 BAZ1BQ9UIG0 1483 aaKnown RBP40■■■■□ 3.99
LHX1-203ENST00000619297 WIZO95785 1651 aa39.78■■■■□ 3.96
LHX1-203ENST00000619297 RSF1Q96T23 1441 aaPredicted RBP39.67■■■■□ 3.94
LHX1-203ENST00000619297 TOP2AP11388 1531 aaKnown RBP39.38■■■■□ 3.89
LHX1-203ENST00000619297 LAMC3Q9Y6N6 1575 aa39.3■■■■□ 3.88
LHX1-203ENST00000619297 NESP48681 1621 aa39.29■■■■□ 3.88
LHX1-203ENST00000619297 ERCC6Q03468 1493 aa39.25■■■■□ 3.87
LHX1-203ENST00000619297 CADPSQ9ULU8 1353 aa39.08■■■■□ 3.85
LHX1-203ENST00000619297 PDS5BQ9NTI5 1447 aa39■■■■□ 3.83
LHX1-203ENST00000619297 KIF21AQ7Z4S6 1674 aa38.94■■■■□ 3.82
LHX1-203ENST00000619297 CUX2O14529 1486 aa38.87■■■■□ 3.81
LHX1-203ENST00000619297 CCDC88BA6NC98 1476 aa38.86■■■■□ 3.81
LHX1-203ENST00000619297 CFTRP13569 1480 aa38.86■■■■□ 3.81
LHX1-203ENST00000619297 THOC2Q8NI27 1593 aaKnown RBP38.8■■■■□ 3.8
LHX1-203ENST00000619297 PRDM2Q13029 1718 aa38.72■■■■□ 3.79
LHX1-203ENST00000619297 FANCD2Q9BXW9 1451 aa38.66■■■■□ 3.78
LHX1-203ENST00000619297 CEP164Q9UPV0 1460 aa38.66■■■■□ 3.78
LHX1-203ENST00000619297 MRC2Q9UBG0 1479 aa38.6■■■■□ 3.77
LHX1-203ENST00000619297 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
LHX1-203ENST00000619297 WDR62O43379 1518 aa38.49■■■■□ 3.75
LHX1-203ENST00000619297 URB2Q14146 1524 aaKnown RBP38.26■■■■□ 3.72
LHX1-203ENST00000619297 ABCC8Q09428 1581 aa38.1■■■■□ 3.69
LHX1-203ENST00000619297 TOPBP1Q92547 1522 aa38.04■■■■□ 3.68
LHX1-203ENST00000619297 DNMBPQ6XZF7 1577 aa38.03■■■■□ 3.68
LHX1-203ENST00000619297 IFT140Q96RY7 1462 aa37.84■■■■□ 3.65
LHX1-203ENST00000619297 CUX1P39880 1505 aa37.71■■■■□ 3.63
LHX1-203ENST00000619297 POLA1P09884 1462 aaPredicted RBP37.7■■■■□ 3.63
LHX1-203ENST00000619297 DNAJC5Q9H3Z4 198 aa37.66■■■■□ 3.62
LHX1-203ENST00000619297 TARBP1Q13395 1621 aaKnown RBP37.65■■■■□ 3.62
LHX1-203ENST00000619297 FGD5Q6ZNL6 1462 aa37.61■■■■□ 3.61
LHX1-203ENST00000619297 ZNF608Q9ULD9 1512 aaPredicted RBP37.61■■■■□ 3.61
LHX1-203ENST00000619297 EIF4G3O43432 1585 aaKnown RBP37.55■■■■□ 3.6
LHX1-203ENST00000619297 SOGA1O94964 1423 aa37.54■■■■□ 3.6
LHX1-203ENST00000619297 RAD54L2Q9Y4B4 1467 aa37.5■■■■□ 3.59
LHX1-203ENST00000619297 WRNQ14191 1432 aaPredicted RBP eCLIP37.46■■■■□ 3.59
LHX1-203ENST00000619297 BIVM-ERCC5R4GMW8 1640 aa37.45■■■■□ 3.59
LHX1-203ENST00000619297 WDR97A6NE52 1622 aa37.44■■■■□ 3.58
LHX1-203ENST00000619297 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
LHX1-203ENST00000619297 AQRO60306 1485 aaKnown RBP eCLIP37.39■■■■□ 3.58
LHX1-203ENST00000619297 SYNJ1O43426 1573 aa37.38■■■■□ 3.57
LHX1-203ENST00000619297 TDRD9Q8NDG6 1382 aaKnown RBP37.29■■■■□ 3.56
LHX1-203ENST00000619297 ABCA10Q8WWZ4 1543 aa37.26■■■■□ 3.55
LHX1-203ENST00000619297 OSCARQ8IYS5 282 aa37.19■■■■□ 3.54
LHX1-203ENST00000619297 ABCA5Q8WWZ7 1642 aa37.15■■■■□ 3.54
LHX1-203ENST00000619297 GRIN2BQ13224 1484 aa37.14■■■■□ 3.54
LHX1-203ENST00000619297 PBRM1Q86U86 1689 aa37.14■■■■□ 3.54
LHX1-203ENST00000619297 GAPVD1Q14C86 1478 aa37.13■■■■□ 3.53
LHX1-203ENST00000619297 CHD1O14646 1710 aa37.11■■■■□ 3.53
LHX1-203ENST00000619297 SNAPC4Q5SXM2 1469 aa37.08■■■■□ 3.53
LHX1-203ENST00000619297 MAGI1Q96QZ7 1491 aaPredicted RBP37.08■■■■□ 3.53
LHX1-203ENST00000619297 FBLN2P98095 1184 aa36.97■■■■□ 3.51
LHX1-203ENST00000619297 SYNJ2O15056 1496 aa36.92■■■■□ 3.5
LHX1-203ENST00000619297 CHMP7Q8WUX9 453 aaPredicted RBP36.87■■■■□ 3.49
LHX1-203ENST00000619297 ERICH3Q5RHP9 1530 aa36.85■■■■□ 3.49
LHX1-203ENST00000619297 ADAMTS12P58397 1594 aa36.79■■■■□ 3.48
LHX1-203ENST00000619297 FHAD1B1AJZ9 1412 aa36.7■■■■□ 3.47
LHX1-203ENST00000619297 KIF27Q86VH2 1401 aa36.7■■■■□ 3.47
LHX1-203ENST00000619297 GRIN2AQ12879 1464 aa36.67■■■■□ 3.46
LHX1-203ENST00000619297 CLASP1Q7Z460 1538 aa36.66■■■■□ 3.46
LHX1-203ENST00000619297 RIMBP3CA6NJZ7 1639 aa36.64■■■■□ 3.46
LHX1-203ENST00000619297 RIMBP3BA6NNM3 1639 aa36.64■■■■□ 3.46
LHX1-203ENST00000619297 RIMBP3Q9UFD9 1639 aa36.64■■■■□ 3.46
LHX1-203ENST00000619297 ARHGEF11O15085 1522 aa36.61■■■■□ 3.45
LHX1-203ENST00000619297 CUL7Q14999 1698 aa36.55■■■■□ 3.44
LHX1-203ENST00000619297 TRIM41Q8WV44 630 aa36.5■■■■□ 3.43
LHX1-203ENST00000619297 IGF1RP08069 1367 aa36.48■■■■□ 3.43
LHX1-203ENST00000619297 NUP160Q12769 1436 aa36.48■■■■□ 3.43
LHX1-203ENST00000619297 CEP170Q5SW79 1584 aa36.48■■■■□ 3.43
LHX1-203ENST00000619297 CARMIL1Q5VZK9 1371 aa36.29■■■■□ 3.4
LHX1-203ENST00000619297 ARAP1Q96P48 1450 aa36.28■■■■□ 3.4
LHX1-203ENST00000619297 SHROOM2Q13796 1616 aa36.27■■■■□ 3.4
LHX1-203ENST00000619297 RUSC2Q8N2Y8 1516 aa36.26■■■■□ 3.4
LHX1-203ENST00000619297 CYB5RLQ6IPT4 315 aa36.21■■■■□ 3.39
LHX1-203ENST00000619297 KIAA0586Q9BVV6 1533 aa36.13■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms