RNA–Protein interactions for RNA: ENST00000619290.4

CYFIP1-210, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-210ENST00000619290 NISCHQ9Y2I1 1504 aa31.57■■■□□ 2.64
CYFIP1-210ENST00000619290 ABCC9O60706 1549 aa29.2■■■□□ 2.26
CYFIP1-210ENST00000619290 CCDC180Q9P1Z9 1646 aa28.53■■■□□ 2.16
CYFIP1-210ENST00000619290 DNAJC5BQ9UF47 199 aa27.93■■■□□ 2.06
CYFIP1-210ENST00000619290 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
CYFIP1-210ENST00000619290 NACADO15069 1562 aa27.14■■□□□ 1.94
CYFIP1-210ENST00000619290 PABPN1Q86U42 306 aaKnown RBP eCLIP27.12■■□□□ 1.93
CYFIP1-210ENST00000619290 DCAF8L2P0C7V8 631 aa26.99■■□□□ 1.91
CYFIP1-210ENST00000619290 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
CYFIP1-210ENST00000619290 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
CYFIP1-210ENST00000619290 MYO15BQ96JP2 1530 aa26.57■■□□□ 1.84
CYFIP1-210ENST00000619290 CECR2Q9BXF3 1484 aa26.36■■□□□ 1.81
CYFIP1-210ENST00000619290 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
CYFIP1-210ENST00000619290 SHROOM4Q9ULL8 1493 aa26.27■■□□□ 1.8
CYFIP1-210ENST00000619290 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
CYFIP1-210ENST00000619290 DNAJC5Q9H3Z4 198 aa26.07■■□□□ 1.76
CYFIP1-210ENST00000619290 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
CYFIP1-210ENST00000619290 DCAF1Q9Y4B6 1507 aa26.02■■□□□ 1.76
CYFIP1-210ENST00000619290 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
CYFIP1-210ENST00000619290 CUX2O14529 1486 aa25.38■■□□□ 1.65
CYFIP1-210ENST00000619290 ERCC6Q03468 1493 aa25.25■■□□□ 1.63
CYFIP1-210ENST00000619290 NCAPD3P42695 1498 aa25.09■■□□□ 1.61
CYFIP1-210ENST00000619290 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
CYFIP1-210ENST00000619290 NESP48681 1621 aa24.91■■□□□ 1.58
CYFIP1-210ENST00000619290 HMGXB3Q12766 1538 aa24.83■■□□□ 1.57
CYFIP1-210ENST00000619290 SMARCA2P51531 1590 aa24.81■■□□□ 1.56
CYFIP1-210ENST00000619290 SMARCA4P51532 1647 aa24.74■■□□□ 1.55
CYFIP1-210ENST00000619290 THOC2Q8NI27 1593 aaKnown RBP24.73■■□□□ 1.55
CYFIP1-210ENST00000619290 TRIM41Q8WV44 630 aa24.72■■□□□ 1.55
CYFIP1-210ENST00000619290 BAZ1BQ9UIG0 1483 aaKnown RBP24.67■■□□□ 1.54
CYFIP1-210ENST00000619290 LAMC3Q9Y6N6 1575 aa24.59■■□□□ 1.53
CYFIP1-210ENST00000619290 BAZ1AQ9NRL2 1556 aaPredicted RBP24.54■■□□□ 1.52
CYFIP1-210ENST00000619290 PDS5BQ9NTI5 1447 aa24.52■■□□□ 1.52
CYFIP1-210ENST00000619290 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
CYFIP1-210ENST00000619290 PEG3Q9GZU2 1588 aa24.49■■□□□ 1.51
CYFIP1-210ENST00000619290 MRC2Q9UBG0 1479 aa24.33■■□□□ 1.49
CYFIP1-210ENST00000619290 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.48
CYFIP1-210ENST00000619290 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
CYFIP1-210ENST00000619290 WDR62O43379 1518 aa24.27■■□□□ 1.48
CYFIP1-210ENST00000619290 OSCARQ8IYS5 282 aa24.16■■□□□ 1.46
CYFIP1-210ENST00000619290 CEP164Q9UPV0 1460 aa24.11■■□□□ 1.45
CYFIP1-210ENST00000619290 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
CYFIP1-210ENST00000619290 WIZO95785 1651 aa23.99■■□□□ 1.43
CYFIP1-210ENST00000619290 CFTRP13569 1480 aa23.91■■□□□ 1.42
CYFIP1-210ENST00000619290 URB2Q14146 1524 aaKnown RBP23.88■■□□□ 1.41
CYFIP1-210ENST00000619290 RIMBP3CA6NJZ7 1639 aa23.86■■□□□ 1.41
CYFIP1-210ENST00000619290 RIMBP3BA6NNM3 1639 aa23.86■■□□□ 1.41
CYFIP1-210ENST00000619290 RIMBP3Q9UFD9 1639 aa23.86■■□□□ 1.41
CYFIP1-210ENST00000619290 ARHGEF11O15085 1522 aa23.74■■□□□ 1.39
CYFIP1-210ENST00000619290 ZNF608Q9ULD9 1512 aaPredicted RBP23.69■■□□□ 1.38
CYFIP1-210ENST00000619290 IFT140Q96RY7 1462 aa23.66■■□□□ 1.38
CYFIP1-210ENST00000619290 TOP2AP11388 1531 aaKnown RBP23.65■■□□□ 1.38
CYFIP1-210ENST00000619290 CYB5RLQ6IPT4 315 aa23.65■■□□□ 1.38
CYFIP1-210ENST00000619290 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
CYFIP1-210ENST00000619290 TRHP20396 242 aaPredicted RBP23.59■■□□□ 1.37
CYFIP1-210ENST00000619290 PRDM2Q13029 1718 aa23.51■■□□□ 1.35
CYFIP1-210ENST00000619290 TOPBP1Q92547 1522 aa23.51■■□□□ 1.35
CYFIP1-210ENST00000619290 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
CYFIP1-210ENST00000619290 ARAP1Q96P48 1450 aa23.48■■□□□ 1.35
CYFIP1-210ENST00000619290 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
CYFIP1-210ENST00000619290 AQRO60306 1485 aaKnown RBP eCLIP23.42■■□□□ 1.346e-6■■■■□ 23.2
CYFIP1-210ENST00000619290 FBLN2P98095 1184 aa23.41■■□□□ 1.34
CYFIP1-210ENST00000619290 CHD1O14646 1710 aa23.4■■□□□ 1.34
CYFIP1-210ENST00000619290 ABCC8Q09428 1581 aa23.4■■□□□ 1.34
CYFIP1-210ENST00000619290 DNMBPQ6XZF7 1577 aa23.35■■□□□ 1.33
CYFIP1-210ENST00000619290 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
CYFIP1-210ENST00000619290 TARBP1Q13395 1621 aaKnown RBP23.33■■□□□ 1.32
CYFIP1-210ENST00000619290 POLA1P09884 1462 aaPredicted RBP23.24■■□□□ 1.31
CYFIP1-210ENST00000619290 RAD54L2Q9Y4B4 1467 aa23.18■■□□□ 1.3
CYFIP1-210ENST00000619290 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
CYFIP1-210ENST00000619290 CLASP1Q7Z460 1538 aa23.15■■□□□ 1.3
CYFIP1-210ENST00000619290 SNAPC4Q5SXM2 1469 aa23.14■■□□□ 1.29
CYFIP1-210ENST00000619290 SOGA1O94964 1423 aa23.14■■□□□ 1.29
CYFIP1-210ENST00000619290 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
CYFIP1-210ENST00000619290 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
CYFIP1-210ENST00000619290 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
CYFIP1-210ENST00000619290 WDR97A6NE52 1622 aa23.02■■□□□ 1.28
CYFIP1-210ENST00000619290 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
CYFIP1-210ENST00000619290 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
CYFIP1-210ENST00000619290 SYNJ2O15056 1496 aa22.98■■□□□ 1.27
CYFIP1-210ENST00000619290 GAPVD1Q14C86 1478 aa22.98■■□□□ 1.27
CYFIP1-210ENST00000619290 CUX1P39880 1505 aa22.89■■□□□ 1.26
CYFIP1-210ENST00000619290 PBRM1Q86U86 1689 aa22.81■■□□□ 1.24
CYFIP1-210ENST00000619290 ERCC6L2Q5T890 1561 aa22.77■■□□□ 1.24
CYFIP1-210ENST00000619290 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
CYFIP1-210ENST00000619290 ABCA10Q8WWZ4 1543 aa22.7■■□□□ 1.22
CYFIP1-210ENST00000619290 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
CYFIP1-210ENST00000619290 CEP170Q5SW79 1584 aa22.67■■□□□ 1.22
CYFIP1-210ENST00000619290 NUP160Q12769 1436 aa22.64■■□□□ 1.21
CYFIP1-210ENST00000619290 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
CYFIP1-210ENST00000619290 KIF13AQ9H1H9 1805 aa22.57■■□□□ 1.2
CYFIP1-210ENST00000619290 SHROOM2Q13796 1616 aa22.57■■□□□ 1.2
CYFIP1-210ENST00000619290 FHAD1B1AJZ9 1412 aa22.52■■□□□ 1.2
CYFIP1-210ENST00000619290 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
CYFIP1-210ENST00000619290 PRG4Q92954 1404 aaPredicted RBP22.49■■□□□ 1.19
CYFIP1-210ENST00000619290 FAM69CQ0P6D2 419 aa22.49■■□□□ 1.19
CYFIP1-210ENST00000619290 ABCC10Q5T3U5 1492 aa22.45■■□□□ 1.18
CYFIP1-210ENST00000619290 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
CYFIP1-210ENST00000619290 KDM4FA0A1W2PPD8 638 aa22.41■■□□□ 1.18
CYFIP1-210ENST00000619290 NPM1P06748 294 aaKnown RBP eCLIP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms