RNA–Protein interactions for RNA: ENST00000619192.4

PMPCA-209, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-209ENST00000619192 NISCHQ9Y2I1 1504 aa52.16■■■■■ 5.94
PMPCA-209ENST00000619192 CCDC180Q9P1Z9 1646 aa46.39■■■■■ 5.02
PMPCA-209ENST00000619192 ABCC9O60706 1549 aa45.03■■■■■ 4.8
PMPCA-209ENST00000619192 NACADO15069 1562 aa43.54■■■■■ 4.56
PMPCA-209ENST00000619192 ZCCHC6Q5VYS8 1495 aaKnown RBP43.52■■■■■ 4.56
PMPCA-209ENST00000619192 RB1CC1Q8TDY2 1594 aa43.5■■■■■ 4.55
PMPCA-209ENST00000619192 MYO15BQ96JP2 1530 aa43.45■■■■■ 4.55
PMPCA-209ENST00000619192 DCAF1Q9Y4B6 1507 aa43.29■■■■■ 4.52
PMPCA-209ENST00000619192 DCAF8L2P0C7V8 631 aa43.14■■■■■ 4.5
PMPCA-209ENST00000619192 UNC13AQ9UPW8 1703 aa42.56■■■■■ 4.4
PMPCA-209ENST00000619192 BICRAQ9NZM4 1560 aa42.25■■■■■ 4.35
PMPCA-209ENST00000619192 SCRIBQ14160 1630 aa42.15■■■■■ 4.34
PMPCA-209ENST00000619192 PABPN1Q86U42 306 aaKnown RBP eCLIP42.02■■■■■ 4.32
PMPCA-209ENST00000619192 SHROOM4Q9ULL8 1493 aa41.91■■■■■ 4.3
PMPCA-209ENST00000619192 DNAJC5BQ9UF47 199 aa41.23■■■■■ 4.19
PMPCA-209ENST00000619192 EIF4G1Q04637 1599 aaKnown RBP41.07■■■■■ 4.16
PMPCA-209ENST00000619192 CC2D2AQ9P2K1 1620 aa40.83■■■■■ 4.13
PMPCA-209ENST00000619192 CECR2Q9BXF3 1484 aa40.56■■■■■ 4.08
PMPCA-209ENST00000619192 SMARCA4P51532 1647 aa40.45■■■■■ 4.07
PMPCA-209ENST00000619192 BAZ1AQ9NRL2 1556 aaPredicted RBP40.41■■■■■ 4.06
PMPCA-209ENST00000619192 NCAPD3P42695 1498 aa40.18■■■■■ 4.02
PMPCA-209ENST00000619192 ATAD2BQ9ULI0 1458 aa40.18■■■■■ 4.02
PMPCA-209ENST00000619192 MROH2BQ7Z745 1585 aa40.17■■■■■ 4.02
PMPCA-209ENST00000619192 PEG3Q9GZU2 1588 aa40.16■■■■■ 4.02
PMPCA-209ENST00000619192 SMARCA2P51531 1590 aa40.14■■■■■ 4.02
PMPCA-209ENST00000619192 HMGXB3Q12766 1538 aa40.01■■■■■ 4
PMPCA-209ENST00000619192 BAZ1BQ9UIG0 1483 aaKnown RBP39.79■■■■□ 3.96
PMPCA-209ENST00000619192 RSF1Q96T23 1441 aaPredicted RBP39.76■■■■□ 3.96
PMPCA-209ENST00000619192 WIZO95785 1651 aa39.71■■■■□ 3.95
PMPCA-209ENST00000619192 TOP2AP11388 1531 aaKnown RBP39.36■■■■□ 3.89
PMPCA-209ENST00000619192 LAMC3Q9Y6N6 1575 aa39.08■■■■□ 3.85
PMPCA-209ENST00000619192 NESP48681 1621 aa39.04■■■■□ 3.84
PMPCA-209ENST00000619192 CADPSQ9ULU8 1353 aa38.95■■■■□ 3.83
PMPCA-209ENST00000619192 CCDC88BA6NC98 1476 aa38.85■■■■□ 3.81
PMPCA-209ENST00000619192 CFTRP13569 1480 aa38.8■■■■□ 3.8
PMPCA-209ENST00000619192 ERCC6Q03468 1493 aa38.77■■■■□ 3.8
PMPCA-209ENST00000619192 PDS5BQ9NTI5 1447 aa38.73■■■■□ 3.79
PMPCA-209ENST00000619192 KIF21AQ7Z4S6 1674 aa38.65■■■■□ 3.78
PMPCA-209ENST00000619192 SUPT5HO00267 1087 aaKnown RBP38.59■■■■□ 3.77
PMPCA-209ENST00000619192 THOC2Q8NI27 1593 aaKnown RBP38.55■■■■□ 3.76
PMPCA-209ENST00000619192 PRDM2Q13029 1718 aa38.55■■■■□ 3.76
PMPCA-209ENST00000619192 FANCD2Q9BXW9 1451 aa38.47■■■■□ 3.75
PMPCA-209ENST00000619192 CUX2O14529 1486 aa38.47■■■■□ 3.75
PMPCA-209ENST00000619192 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
PMPCA-209ENST00000619192 MRC2Q9UBG0 1479 aa38.35■■■■□ 3.73
PMPCA-209ENST00000619192 WDR62O43379 1518 aa38.28■■■■□ 3.72
PMPCA-209ENST00000619192 URB2Q14146 1524 aaKnown RBP38.12■■■■□ 3.69
PMPCA-209ENST00000619192 ABCC8Q09428 1581 aa37.93■■■■□ 3.66
PMPCA-209ENST00000619192 TOPBP1Q92547 1522 aa37.91■■■■□ 3.66
PMPCA-209ENST00000619192 DNMBPQ6XZF7 1577 aa37.89■■■■□ 3.66
PMPCA-209ENST00000619192 CUX1P39880 1505 aa37.67■■■■□ 3.62
PMPCA-209ENST00000619192 IFT140Q96RY7 1462 aa37.64■■■■□ 3.62
PMPCA-209ENST00000619192 POLA1P09884 1462 aaPredicted RBP37.6■■■■□ 3.61
PMPCA-209ENST00000619192 TARBP1Q13395 1621 aaKnown RBP37.54■■■■□ 3.6
PMPCA-209ENST00000619192 FGD5Q6ZNL6 1462 aa37.5■■■■□ 3.59
PMPCA-209ENST00000619192 BIVM-ERCC5R4GMW8 1640 aa37.45■■■■□ 3.59
PMPCA-209ENST00000619192 WRNQ14191 1432 aaPredicted RBP eCLIP37.44■■■■□ 3.58
PMPCA-209ENST00000619192 TOP2BQ02880 1626 aa37.43■■■■□ 3.58
PMPCA-209ENST00000619192 ZNF608Q9ULD9 1512 aaPredicted RBP37.41■■■■□ 3.58
PMPCA-209ENST00000619192 SYNJ1O43426 1573 aa37.38■■■■□ 3.58
PMPCA-209ENST00000619192 SOGA1O94964 1423 aa37.37■■■■□ 3.57
PMPCA-209ENST00000619192 RAD54L2Q9Y4B4 1467 aa37.36■■■■□ 3.57
PMPCA-209ENST00000619192 EIF4G3O43432 1585 aaKnown RBP37.32■■■■□ 3.56
PMPCA-209ENST00000619192 WDR97A6NE52 1622 aa37.32■■■■□ 3.56
PMPCA-209ENST00000619192 ABCA10Q8WWZ4 1543 aa37.2■■■■□ 3.55
PMPCA-209ENST00000619192 AQRO60306 1485 aaKnown RBP eCLIP37.18■■■■□ 3.542e-7■■□□□ 12.5
PMPCA-209ENST00000619192 TDRD9Q8NDG6 1382 aaKnown RBP37.11■■■■□ 3.53
PMPCA-209ENST00000619192 ABCA5Q8WWZ7 1642 aa37.07■■■■□ 3.52
PMPCA-209ENST00000619192 DNAJC5Q9H3Z4 198 aa37.04■■■■□ 3.52
PMPCA-209ENST00000619192 GAPVD1Q14C86 1478 aa36.98■■■■□ 3.51
PMPCA-209ENST00000619192 GRIN2BQ13224 1484 aa36.97■■■■□ 3.51
PMPCA-209ENST00000619192 PBRM1Q86U86 1689 aa36.93■■■■□ 3.5
PMPCA-209ENST00000619192 MAGI1Q96QZ7 1491 aaPredicted RBP36.9■■■■□ 3.5
PMPCA-209ENST00000619192 SNAPC4Q5SXM2 1469 aa36.87■■■■□ 3.49
PMPCA-209ENST00000619192 CHD1O14646 1710 aa36.79■■■■□ 3.48
PMPCA-209ENST00000619192 ERICH3Q5RHP9 1530 aa36.77■■■■□ 3.48
PMPCA-209ENST00000619192 OSCARQ8IYS5 282 aa36.76■■■■□ 3.48
PMPCA-209ENST00000619192 SYNJ2O15056 1496 aa36.73■■■■□ 3.47
PMPCA-209ENST00000619192 ADAMTS12P58397 1594 aa36.67■■■■□ 3.46
PMPCA-209ENST00000619192 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
PMPCA-209ENST00000619192 FHAD1B1AJZ9 1412 aa36.58■■■■□ 3.45
PMPCA-209ENST00000619192 CHMP7Q8WUX9 453 aaPredicted RBP36.55■■■■□ 3.44
PMPCA-209ENST00000619192 FBLN2P98095 1184 aa36.52■■■■□ 3.44
PMPCA-209ENST00000619192 GRIN2AQ12879 1464 aa36.51■■■■□ 3.44
PMPCA-209ENST00000619192 TRIM41Q8WV44 630 aa36.51■■■■□ 3.44
PMPCA-209ENST00000619192 IGF1RP08069 1367 aa36.51■■■■□ 3.43
PMPCA-209ENST00000619192 CLASP1Q7Z460 1538 aa36.48■■■■□ 3.43
PMPCA-209ENST00000619192 CUL7Q14999 1698 aa36.45■■■■□ 3.42
PMPCA-209ENST00000619192 NUP160Q12769 1436 aa36.4■■■■□ 3.42
PMPCA-209ENST00000619192 RUSC2Q8N2Y8 1516 aa36.34■■■■□ 3.41
PMPCA-209ENST00000619192 CEP170Q5SW79 1584 aa36.33■■■■□ 3.41
PMPCA-209ENST00000619192 ARHGEF11O15085 1522 aa36.26■■■■□ 3.4
PMPCA-209ENST00000619192 CARMIL1Q5VZK9 1371 aa36.25■■■■□ 3.39
PMPCA-209ENST00000619192 RIMBP3CA6NJZ7 1639 aa36.24■■■■□ 3.39
PMPCA-209ENST00000619192 RIMBP3BA6NNM3 1639 aa36.24■■■■□ 3.39
PMPCA-209ENST00000619192 RIMBP3Q9UFD9 1639 aa36.24■■■■□ 3.39
PMPCA-209ENST00000619192 CHIC1Q5VXU3 224 aa36.24■■■■□ 3.39
PMPCA-209ENST00000619192 SHROOM2Q13796 1616 aa36.14■■■■□ 3.38
PMPCA-209ENST00000619192 EEA1Q15075 1411 aa36.09■■■■□ 3.37
PMPCA-209ENST00000619192 RAPGEF2Q9Y4G8 1499 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms