RNA–Protein interactions for RNA: ENST00000618385.1

SYNJ2BP-COX16-204, Transcript of SYNJ2BP-COX16 readthrough, humanhuman

TSL 3

Gene SYNJ2BP-COX16, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16-204ENST00000618385 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
SYNJ2BP-COX16-204ENST00000618385 CCDC180Q9P1Z9 1646 aa30.24■■■□□ 2.43
SYNJ2BP-COX16-204ENST00000618385 ABCC9O60706 1549 aa29.91■■■□□ 2.38
SYNJ2BP-COX16-204ENST00000618385 RB1CC1Q8TDY2 1594 aa28.64■■■□□ 2.18
SYNJ2BP-COX16-204ENST00000618385 NACADO15069 1562 aa28.5■■■□□ 2.15
SYNJ2BP-COX16-204ENST00000618385 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
SYNJ2BP-COX16-204ENST00000618385 MYO15BQ96JP2 1530 aa28.16■■■□□ 2.1
SYNJ2BP-COX16-204ENST00000618385 UNC13AQ9UPW8 1703 aa28.03■■■□□ 2.08
SYNJ2BP-COX16-204ENST00000618385 ZCCHC6Q5VYS8 1495 aaKnown RBP27.99■■■□□ 2.07
SYNJ2BP-COX16-204ENST00000618385 DCAF1Q9Y4B6 1507 aa27.88■■■□□ 2.05
SYNJ2BP-COX16-204ENST00000618385 PABPN1Q86U42 306 aaKnown RBP eCLIP27.85■■■□□ 2.05
SYNJ2BP-COX16-204ENST00000618385 DNAJC5BQ9UF47 199 aa27.73■■■□□ 2.03
SYNJ2BP-COX16-204ENST00000618385 BICRAQ9NZM4 1560 aa27.72■■■□□ 2.03
SYNJ2BP-COX16-204ENST00000618385 SCRIBQ14160 1630 aa27.52■■■□□ 2
SYNJ2BP-COX16-204ENST00000618385 SHROOM4Q9ULL8 1493 aa27.44■■□□□ 1.98
SYNJ2BP-COX16-204ENST00000618385 EIF4G1Q04637 1599 aaKnown RBP27.05■■□□□ 1.92
SYNJ2BP-COX16-204ENST00000618385 CC2D2AQ9P2K1 1620 aa27.05■■□□□ 1.92
SYNJ2BP-COX16-204ENST00000618385 CECR2Q9BXF3 1484 aa26.92■■□□□ 1.9
SYNJ2BP-COX16-204ENST00000618385 SMARCA4P51532 1647 aa26.28■■□□□ 1.8
SYNJ2BP-COX16-204ENST00000618385 NCAPD3P42695 1498 aa26.25■■□□□ 1.79
SYNJ2BP-COX16-204ENST00000618385 SMARCA2P51531 1590 aa26.2■■□□□ 1.79
SYNJ2BP-COX16-204ENST00000618385 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.79
SYNJ2BP-COX16-204ENST00000618385 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
SYNJ2BP-COX16-204ENST00000618385 HMGXB3Q12766 1538 aa26.11■■□□□ 1.77
SYNJ2BP-COX16-204ENST00000618385 PEG3Q9GZU2 1588 aa26.02■■□□□ 1.76
SYNJ2BP-COX16-204ENST00000618385 BAZ1BQ9UIG0 1483 aaKnown RBP26.01■■□□□ 1.75
SYNJ2BP-COX16-204ENST00000618385 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
SYNJ2BP-COX16-204ENST00000618385 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
SYNJ2BP-COX16-204ENST00000618385 NESP48681 1621 aa25.74■■□□□ 1.71
SYNJ2BP-COX16-204ENST00000618385 WIZO95785 1651 aa25.72■■□□□ 1.71
SYNJ2BP-COX16-204ENST00000618385 CUX2O14529 1486 aa25.7■■□□□ 1.7
SYNJ2BP-COX16-204ENST00000618385 LAMC3Q9Y6N6 1575 aa25.68■■□□□ 1.7
SYNJ2BP-COX16-204ENST00000618385 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
SYNJ2BP-COX16-204ENST00000618385 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
SYNJ2BP-COX16-204ENST00000618385 PDS5BQ9NTI5 1447 aa25.5■■□□□ 1.67
SYNJ2BP-COX16-204ENST00000618385 THOC2Q8NI27 1593 aaKnown RBP25.47■■□□□ 1.67
SYNJ2BP-COX16-204ENST00000618385 CADPSQ9ULU8 1353 aa25.46■■□□□ 1.67
SYNJ2BP-COX16-204ENST00000618385 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
SYNJ2BP-COX16-204ENST00000618385 DNAJC5Q9H3Z4 198 aa25.35■■□□□ 1.65
SYNJ2BP-COX16-204ENST00000618385 MRC2Q9UBG0 1479 aa25.25■■□□□ 1.63
SYNJ2BP-COX16-204ENST00000618385 CFTRP13569 1480 aa25.22■■□□□ 1.63
SYNJ2BP-COX16-204ENST00000618385 CEP164Q9UPV0 1460 aa25.22■■□□□ 1.63
SYNJ2BP-COX16-204ENST00000618385 FANCD2Q9BXW9 1451 aa25.19■■□□□ 1.62
SYNJ2BP-COX16-204ENST00000618385 WDR62O43379 1518 aa25.18■■□□□ 1.62
SYNJ2BP-COX16-204ENST00000618385 PRDM2Q13029 1718 aa25.15■■□□□ 1.62
SYNJ2BP-COX16-204ENST00000618385 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
SYNJ2BP-COX16-204ENST00000618385 URB2Q14146 1524 aaKnown RBP24.94■■□□□ 1.58
SYNJ2BP-COX16-204ENST00000618385 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
SYNJ2BP-COX16-204ENST00000618385 TOPBP1Q92547 1522 aa24.74■■□□□ 1.55
SYNJ2BP-COX16-204ENST00000618385 DNMBPQ6XZF7 1577 aa24.71■■□□□ 1.55
SYNJ2BP-COX16-204ENST00000618385 IFT140Q96RY7 1462 aa24.7■■□□□ 1.54
SYNJ2BP-COX16-204ENST00000618385 SUPT5HO00267 1087 aaKnown RBP24.62■■□□□ 1.53
SYNJ2BP-COX16-204ENST00000618385 ZNF608Q9ULD9 1512 aaPredicted RBP24.58■■□□□ 1.53
SYNJ2BP-COX16-204ENST00000618385 OSCARQ8IYS5 282 aa24.57■■□□□ 1.52
SYNJ2BP-COX16-204ENST00000618385 EIF4G3O43432 1585 aaKnown RBP24.53■■□□□ 1.52
SYNJ2BP-COX16-204ENST00000618385 TARBP1Q13395 1621 aaKnown RBP24.51■■□□□ 1.51
SYNJ2BP-COX16-204ENST00000618385 POLA1P09884 1462 aaPredicted RBP24.5■■□□□ 1.51
SYNJ2BP-COX16-204ENST00000618385 SOGA1O94964 1423 aa24.41■■□□□ 1.5
SYNJ2BP-COX16-204ENST00000618385 AQRO60306 1485 aaKnown RBP eCLIP24.4■■□□□ 1.5
SYNJ2BP-COX16-204ENST00000618385 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
SYNJ2BP-COX16-204ENST00000618385 CUX1P39880 1505 aa24.39■■□□□ 1.49
SYNJ2BP-COX16-204ENST00000618385 RAD54L2Q9Y4B4 1467 aa24.38■■□□□ 1.49
SYNJ2BP-COX16-204ENST00000618385 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
SYNJ2BP-COX16-204ENST00000618385 CHD1O14646 1710 aa24.34■■□□□ 1.49
SYNJ2BP-COX16-204ENST00000618385 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
SYNJ2BP-COX16-204ENST00000618385 TDRD9Q8NDG6 1382 aaKnown RBP24.29■■□□□ 1.48
SYNJ2BP-COX16-204ENST00000618385 FBLN2P98095 1184 aa24.25■■□□□ 1.47
SYNJ2BP-COX16-204ENST00000618385 RIMBP3CA6NJZ7 1639 aa24.23■■□□□ 1.47
SYNJ2BP-COX16-204ENST00000618385 RIMBP3BA6NNM3 1639 aa24.23■■□□□ 1.47
SYNJ2BP-COX16-204ENST00000618385 RIMBP3Q9UFD9 1639 aa24.23■■□□□ 1.47
SYNJ2BP-COX16-204ENST00000618385 GRIN2BQ13224 1484 aa24.18■■□□□ 1.46
SYNJ2BP-COX16-204ENST00000618385 SNAPC4Q5SXM2 1469 aa24.18■■□□□ 1.46
SYNJ2BP-COX16-204ENST00000618385 PBRM1Q86U86 1689 aa24.17■■□□□ 1.46
SYNJ2BP-COX16-204ENST00000618385 MAGI1Q96QZ7 1491 aaPredicted RBP24.16■■□□□ 1.46
SYNJ2BP-COX16-204ENST00000618385 ARHGEF11O15085 1522 aa24.15■■□□□ 1.46
SYNJ2BP-COX16-204ENST00000618385 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
SYNJ2BP-COX16-204ENST00000618385 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
SYNJ2BP-COX16-204ENST00000618385 TOP2BQ02880 1626 aa24.12■■□□□ 1.45
SYNJ2BP-COX16-204ENST00000618385 GAPVD1Q14C86 1478 aa24.12■■□□□ 1.45
SYNJ2BP-COX16-204ENST00000618385 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
SYNJ2BP-COX16-204ENST00000618385 WRNQ14191 1432 aaPredicted RBP eCLIP24.1■■□□□ 1.45
SYNJ2BP-COX16-204ENST00000618385 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
SYNJ2BP-COX16-204ENST00000618385 SYNJ1O43426 1573 aa24.07■■□□□ 1.44
SYNJ2BP-COX16-204ENST00000618385 SYNJ2O15056 1496 aa24.07■■□□□ 1.44
SYNJ2BP-COX16-204ENST00000618385 CLASP1Q7Z460 1538 aa23.99■■□□□ 1.43
SYNJ2BP-COX16-204ENST00000618385 CYB5RLQ6IPT4 315 aa23.96■■□□□ 1.43
SYNJ2BP-COX16-204ENST00000618385 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
SYNJ2BP-COX16-204ENST00000618385 ADAMTS12P58397 1594 aa23.89■■□□□ 1.41
SYNJ2BP-COX16-204ENST00000618385 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
SYNJ2BP-COX16-204ENST00000618385 ERICH3Q5RHP9 1530 aa23.85■■□□□ 1.41
SYNJ2BP-COX16-204ENST00000618385 FHAD1B1AJZ9 1412 aa23.83■■□□□ 1.4
SYNJ2BP-COX16-204ENST00000618385 CEP170Q5SW79 1584 aa23.76■■□□□ 1.39
SYNJ2BP-COX16-204ENST00000618385 NUP160Q12769 1436 aa23.74■■□□□ 1.39
SYNJ2BP-COX16-204ENST00000618385 TRHP20396 242 aaPredicted RBP23.66■■□□□ 1.38
SYNJ2BP-COX16-204ENST00000618385 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
SYNJ2BP-COX16-204ENST00000618385 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
SYNJ2BP-COX16-204ENST00000618385 CUL7Q14999 1698 aa23.61■■□□□ 1.37
SYNJ2BP-COX16-204ENST00000618385 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
SYNJ2BP-COX16-204ENST00000618385 RUSC2Q8N2Y8 1516 aa23.54■■□□□ 1.36
SYNJ2BP-COX16-204ENST00000618385 IGF1RP08069 1367 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms