RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
CBWD1-227ENST00000618361 ABCC9O60706 1549 aa18.48■□□□□ 0.55
CBWD1-227ENST00000618361 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
CBWD1-227ENST00000618361 DNAJC5BQ9UF47 199 aa17.71■□□□□ 0.43
CBWD1-227ENST00000618361 RB1CC1Q8TDY2 1594 aa17.46■□□□□ 0.39
CBWD1-227ENST00000618361 NACADO15069 1562 aa17.28■□□□□ 0.36
CBWD1-227ENST00000618361 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
CBWD1-227ENST00000618361 DCAF8L2P0C7V8 631 aa17.03■□□□□ 0.32
CBWD1-227ENST00000618361 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
CBWD1-227ENST00000618361 MYO15BQ96JP2 1530 aa16.98■□□□□ 0.31
CBWD1-227ENST00000618361 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
CBWD1-227ENST00000618361 UNC13AQ9UPW8 1703 aa16.93■□□□□ 0.3
CBWD1-227ENST00000618361 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
CBWD1-227ENST00000618361 CECR2Q9BXF3 1484 aa16.73■□□□□ 0.27
CBWD1-227ENST00000618361 CC2D2AQ9P2K1 1620 aa16.67■□□□□ 0.26
CBWD1-227ENST00000618361 DNAJC5Q9H3Z4 198 aa16.65■□□□□ 0.26
CBWD1-227ENST00000618361 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
CBWD1-227ENST00000618361 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
CBWD1-227ENST00000618361 ZCCHC6Q5VYS8 1495 aaKnown RBP16.53■□□□□ 0.24
CBWD1-227ENST00000618361 SCRIBQ14160 1630 aa16.42■□□□□ 0.22
CBWD1-227ENST00000618361 CUX2O14529 1486 aa16.17■□□□□ 0.18
CBWD1-227ENST00000618361 CHIC1Q5VXU3 224 aa16.01■□□□□ 0.15
CBWD1-227ENST00000618361 ERCC6Q03468 1493 aa16.01■□□□□ 0.15
CBWD1-227ENST00000618361 NCAPD3P42695 1498 aa15.99■□□□□ 0.15
CBWD1-227ENST00000618361 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
CBWD1-227ENST00000618361 HMGXB3Q12766 1538 aa15.79■□□□□ 0.12
CBWD1-227ENST00000618361 SMARCA2P51531 1590 aa15.78■□□□□ 0.12
CBWD1-227ENST00000618361 NESP48681 1621 aa15.75■□□□□ 0.11
CBWD1-227ENST00000618361 TRIM41Q8WV44 630 aa15.71■□□□□ 0.11
CBWD1-227ENST00000618361 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
CBWD1-227ENST00000618361 THOC2Q8NI27 1593 aaKnown RBP15.67■□□□□ 0.1
CBWD1-227ENST00000618361 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
CBWD1-227ENST00000618361 BAZ1BQ9UIG0 1483 aaKnown RBP15.65■□□□□ 0.1
CBWD1-227ENST00000618361 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
CBWD1-227ENST00000618361 PEG3Q9GZU2 1588 aa15.59■□□□□ 0.09
CBWD1-227ENST00000618361 BAZ1AQ9NRL2 1556 aaPredicted RBP15.59■□□□□ 0.09
CBWD1-227ENST00000618361 CADPSQ9ULU8 1353 aa15.48■□□□□ 0.07
CBWD1-227ENST00000618361 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
CBWD1-227ENST00000618361 MRC2Q9UBG0 1479 aa15.46■□□□□ 0.06
CBWD1-227ENST00000618361 WDR62O43379 1518 aa15.43■□□□□ 0.06
CBWD1-227ENST00000618361 MROH2BQ7Z745 1585 aa15.4■□□□□ 0.06
CBWD1-227ENST00000618361 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
CBWD1-227ENST00000618361 CEP164Q9UPV0 1460 aa15.31■□□□□ 0.04
CBWD1-227ENST00000618361 FANCD2Q9BXW9 1451 aa15.26■□□□□ 0.03
CBWD1-227ENST00000618361 CFTRP13569 1480 aa15.2■□□□□ 0.02
CBWD1-227ENST00000618361 WIZO95785 1651 aa15.15■□□□□ 0.02
CBWD1-227ENST00000618361 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
CBWD1-227ENST00000618361 RIMBP3CA6NJZ7 1639 aa15.12■□□□□ 0.01
CBWD1-227ENST00000618361 RIMBP3BA6NNM3 1639 aa15.12■□□□□ 0.01
CBWD1-227ENST00000618361 RIMBP3Q9UFD9 1639 aa15.12■□□□□ 0.01
CBWD1-227ENST00000618361 ARHGEF11O15085 1522 aa15.07■□□□□ 0
CBWD1-227ENST00000618361 IFT140Q96RY7 1462 aa15.05■□□□□ -0
CBWD1-227ENST00000618361 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
CBWD1-227ENST00000618361 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
CBWD1-227ENST00000618361 ZNF608Q9ULD9 1512 aaPredicted RBP15□□□□□ -0.01
CBWD1-227ENST00000618361 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
CBWD1-227ENST00000618361 RSF1Q96T23 1441 aaPredicted RBP14.98□□□□□ -0.01
CBWD1-227ENST00000618361 ABCC8Q09428 1581 aa14.93□□□□□ -0.02
CBWD1-227ENST00000618361 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
CBWD1-227ENST00000618361 ARAP1Q96P48 1450 aa14.89□□□□□ -0.03
CBWD1-227ENST00000618361 PRDM2Q13029 1718 aa14.88□□□□□ -0.03
CBWD1-227ENST00000618361 EIF4G3O43432 1585 aaKnown RBP14.87□□□□□ -0.03
CBWD1-227ENST00000618361 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.03
CBWD1-227ENST00000618361 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.04
CBWD1-227ENST00000618361 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
CBWD1-227ENST00000618361 FBLN2P98095 1184 aa14.8□□□□□ -0.04
CBWD1-227ENST00000618361 TARBP1Q13395 1621 aaKnown RBP14.79□□□□□ -0.04
CBWD1-227ENST00000618361 CHD1O14646 1710 aa14.78□□□□□ -0.04
CBWD1-227ENST00000618361 POLA1P09884 1462 aaPredicted RBP14.74□□□□□ -0.05
CBWD1-227ENST00000618361 CLASP1Q7Z460 1538 aa14.71□□□□□ -0.06
CBWD1-227ENST00000618361 SOGA1O94964 1423 aa14.69□□□□□ -0.06
CBWD1-227ENST00000618361 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
CBWD1-227ENST00000618361 CHMP7Q8WUX9 453 aaPredicted RBP14.68□□□□□ -0.06
CBWD1-227ENST00000618361 TDRD9Q8NDG6 1382 aaKnown RBP14.68□□□□□ -0.06
CBWD1-227ENST00000618361 SYNJ1O43426 1573 aa14.66□□□□□ -0.06
CBWD1-227ENST00000618361 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
CBWD1-227ENST00000618361 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
CBWD1-227ENST00000618361 RAD54L2Q9Y4B4 1467 aa14.66□□□□□ -0.06
CBWD1-227ENST00000618361 SYNJ2O15056 1496 aa14.61□□□□□ -0.07
CBWD1-227ENST00000618361 GRIN2BQ13224 1484 aa14.61□□□□□ -0.07
CBWD1-227ENST00000618361 GAPVD1Q14C86 1478 aa14.58□□□□□ -0.08
CBWD1-227ENST00000618361 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
CBWD1-227ENST00000618361 CUX1P39880 1505 aa14.49□□□□□ -0.09
CBWD1-227ENST00000618361 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
CBWD1-227ENST00000618361 NUP160Q12769 1436 aa14.41□□□□□ -0.1
CBWD1-227ENST00000618361 PBRM1Q86U86 1689 aa14.4□□□□□ -0.1
CBWD1-227ENST00000618361 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
CBWD1-227ENST00000618361 SENP3Q9H4L4 574 aaPredicted RBP14.4□□□□□ -0.1
CBWD1-227ENST00000618361 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
CBWD1-227ENST00000618361 ERCC6L2Q5T890 1561 aa14.38□□□□□ -0.11
CBWD1-227ENST00000618361 CEP170Q5SW79 1584 aa14.37□□□□□ -0.11
CBWD1-227ENST00000618361 SHROOM2Q13796 1616 aa14.33□□□□□ -0.12
CBWD1-227ENST00000618361 FHAD1B1AJZ9 1412 aa14.32□□□□□ -0.12
CBWD1-227ENST00000618361 WRNQ14191 1432 aaPredicted RBP eCLIP14.31□□□□□ -0.12
CBWD1-227ENST00000618361 ADAMTS12P58397 1594 aa14.3□□□□□ -0.12
CBWD1-227ENST00000618361 ABCC10Q5T3U5 1492 aa14.28□□□□□ -0.12
CBWD1-227ENST00000618361 ILDR1Q86SU0 546 aaPredicted RBP14.28□□□□□ -0.12
CBWD1-227ENST00000618361 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.13
CBWD1-227ENST00000618361 KIF13AQ9H1H9 1805 aa14.27□□□□□ -0.13
CBWD1-227ENST00000618361 PRG4Q92954 1404 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms