RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 NISCHQ9Y2I1 1504 aa29.98■■■□□ 2.39
CBWD1-226ENST00000618061 CCDC180Q9P1Z9 1646 aa25.67■■□□□ 1.7
CBWD1-226ENST00000618061 SHROOM4Q9ULL8 1493 aa25.35■■□□□ 1.65
CBWD1-226ENST00000618061 ZCCHC6Q5VYS8 1495 aaKnown RBP25.27■■□□□ 1.64
CBWD1-226ENST00000618061 DCAF8L2P0C7V8 631 aa25.05■■□□□ 1.6
CBWD1-226ENST00000618061 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
CBWD1-226ENST00000618061 DCAF1Q9Y4B6 1507 aa24.54■■□□□ 1.52
CBWD1-226ENST00000618061 ABCC9O60706 1549 aa24.2■■□□□ 1.46
CBWD1-226ENST00000618061 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
CBWD1-226ENST00000618061 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
CBWD1-226ENST00000618061 NACADO15069 1562 aa23.82■■□□□ 1.4
CBWD1-226ENST00000618061 CHIC1Q5VXU3 224 aa23.7■■□□□ 1.38
CBWD1-226ENST00000618061 RSF1Q96T23 1441 aaPredicted RBP23.57■■□□□ 1.36
CBWD1-226ENST00000618061 RB1CC1Q8TDY2 1594 aa23.54■■□□□ 1.36
CBWD1-226ENST00000618061 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
CBWD1-226ENST00000618061 MROH2BQ7Z745 1585 aa23.32■■□□□ 1.32
CBWD1-226ENST00000618061 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
CBWD1-226ENST00000618061 WIZO95785 1651 aa23.21■■□□□ 1.31
CBWD1-226ENST00000618061 PABPN1Q86U42 306 aaKnown RBP eCLIP23.07■■□□□ 1.28
CBWD1-226ENST00000618061 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
CBWD1-226ENST00000618061 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
CBWD1-226ENST00000618061 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
CBWD1-226ENST00000618061 SMARCA4P51532 1647 aa22.93■■□□□ 1.26
CBWD1-226ENST00000618061 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
CBWD1-226ENST00000618061 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
CBWD1-226ENST00000618061 TOP2AP11388 1531 aaKnown RBP22.77■■□□□ 1.24
CBWD1-226ENST00000618061 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
CBWD1-226ENST00000618061 EHMT2Q96KQ7 1210 aa22.67■■□□□ 1.22
CBWD1-226ENST00000618061 SMARCA2P51531 1590 aa22.66■■□□□ 1.22
CBWD1-226ENST00000618061 EIF4G1Q04637 1599 aaKnown RBP22.66■■□□□ 1.22
CBWD1-226ENST00000618061 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
CBWD1-226ENST00000618061 ABCC8Q09428 1581 aa22.54■■□□□ 1.2
CBWD1-226ENST00000618061 PEG3Q9GZU2 1588 aa22.47■■□□□ 1.19
CBWD1-226ENST00000618061 ATAD2BQ9ULI0 1458 aa22.43■■□□□ 1.18
CBWD1-226ENST00000618061 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
CBWD1-226ENST00000618061 HRCP23327 699 aa22.23■■□□□ 1.15
CBWD1-226ENST00000618061 SOGA1O94964 1423 aa22.22■■□□□ 1.15
CBWD1-226ENST00000618061 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
CBWD1-226ENST00000618061 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
CBWD1-226ENST00000618061 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.14
CBWD1-226ENST00000618061 SYNJ1O43426 1573 aa22.1■■□□□ 1.13
CBWD1-226ENST00000618061 PPARGC1BQ86YN6 1023 aaKnown RBP22.08■■□□□ 1.13
CBWD1-226ENST00000618061 NCAPD3P42695 1498 aa22.03■■□□□ 1.12
CBWD1-226ENST00000618061 CSRNP3Q8WYN3 585 aa22.01■■□□□ 1.11
CBWD1-226ENST00000618061 HMGXB3Q12766 1538 aa22■■□□□ 1.11
CBWD1-226ENST00000618061 EEA1Q15075 1411 aa21.93■■□□□ 1.1
CBWD1-226ENST00000618061 UBTFP17480 764 aaKnown RBP21.92■■□□□ 1.1
CBWD1-226ENST00000618061 CEP162Q5TB80 1403 aa21.89■■□□□ 1.09
CBWD1-226ENST00000618061 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
CBWD1-226ENST00000618061 TOP2BQ02880 1626 aa21.82■■□□□ 1.08
CBWD1-226ENST00000618061 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
CBWD1-226ENST00000618061 TTBK1Q5TCY1 1321 aaPredicted RBP21.81■■□□□ 1.08
CBWD1-226ENST00000618061 CC2D2AQ9P2K1 1620 aa21.78■■□□□ 1.08
CBWD1-226ENST00000618061 BIVM-ERCC5R4GMW8 1640 aa21.76■■□□□ 1.07
CBWD1-226ENST00000618061 CFTRP13569 1480 aa21.76■■□□□ 1.07
CBWD1-226ENST00000618061 CUX1P39880 1505 aa21.73■■□□□ 1.07
CBWD1-226ENST00000618061 CEP164Q9UPV0 1460 aa21.73■■□□□ 1.07
CBWD1-226ENST00000618061 KIF21BO75037 1637 aa21.71■■□□□ 1.07
CBWD1-226ENST00000618061 RAPGEF2Q9Y4G8 1499 aa21.69■■□□□ 1.06
CBWD1-226ENST00000618061 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
CBWD1-226ENST00000618061 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
CBWD1-226ENST00000618061 CADPSQ9ULU8 1353 aa21.6■■□□□ 1.05
CBWD1-226ENST00000618061 CLIP1P30622 1438 aa21.56■■□□□ 1.04
CBWD1-226ENST00000618061 PRXQ9BXM0 1461 aa21.48■■□□□ 1.03
CBWD1-226ENST00000618061 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
CBWD1-226ENST00000618061 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.46■■□□□ 1.03
CBWD1-226ENST00000618061 NESP48681 1621 aa21.45■■□□□ 1.02
CBWD1-226ENST00000618061 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
CBWD1-226ENST00000618061 FANCD2Q9BXW9 1451 aa21.42■■□□□ 1.02
CBWD1-226ENST00000618061 ERICH3Q5RHP9 1530 aa21.42■■□□□ 1.02
CBWD1-226ENST00000618061 DNAJC5BQ9UF47 199 aa21.41■■□□□ 1.02
CBWD1-226ENST00000618061 CUX2O14529 1486 aa21.4■■□□□ 1.02
CBWD1-226ENST00000618061 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
CBWD1-226ENST00000618061 VPS8Q8N3P4 1428 aa21.4■■□□□ 1.02
CBWD1-226ENST00000618061 CCER1Q8TC90 406 aaPredicted RBP21.34■■□□□ 1.01
CBWD1-226ENST00000618061 IGF1RP08069 1367 aa21.31■■□□□ 1
CBWD1-226ENST00000618061 APLP2Q06481 763 aa21.29■■□□□ 1
CBWD1-226ENST00000618061 ARAP1Q96P48 1450 aa21.29■■□□□ 1
CBWD1-226ENST00000618061 RAD54L2Q9Y4B4 1467 aa21.27■■□□□ 1
CBWD1-226ENST00000618061 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
CBWD1-226ENST00000618061 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
CBWD1-226ENST00000618061 HNRNPUL2Q1KMD3 747 aaKnown RBP21.21■□□□□ 0.99
CBWD1-226ENST00000618061 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.99
CBWD1-226ENST00000618061 POLA1P09884 1462 aaPredicted RBP21.2■□□□□ 0.98
CBWD1-226ENST00000618061 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
CBWD1-226ENST00000618061 ARHGAP35Q9NRY4 1499 aa21.17■□□□□ 0.98
CBWD1-226ENST00000618061 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
CBWD1-226ENST00000618061 KANK4Q5T7N3 995 aaPredicted RBP21.14■□□□□ 0.98
CBWD1-226ENST00000618061 ABCA10Q8WWZ4 1543 aa21.11■□□□□ 0.97
CBWD1-226ENST00000618061 KIF21AQ7Z4S6 1674 aa21.08■□□□□ 0.97
CBWD1-226ENST00000618061 P3H3Q8IVL6 736 aa21.05■□□□□ 0.96
CBWD1-226ENST00000618061 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
CBWD1-226ENST00000618061 TDRD9Q8NDG6 1382 aaKnown RBP21.03■□□□□ 0.96
CBWD1-226ENST00000618061 WDR97A6NE52 1622 aa20.99■□□□□ 0.95
CBWD1-226ENST00000618061 CUL7Q14999 1698 aa20.93■□□□□ 0.94
CBWD1-226ENST00000618061 ATP1B4Q9UN42 357 aaPredicted RBP20.92■□□□□ 0.94
CBWD1-226ENST00000618061 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
CBWD1-226ENST00000618061 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
CBWD1-226ENST00000618061 FHOD3Q2V2M9 1422 aa20.9■□□□□ 0.94
CBWD1-226ENST00000618061 CTTNBP2Q8WZ74 1663 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms